RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 XAGE3Q8WTP9 111 aa19.23■□□□□ 0.67
CDC42-203ENST00000400259 RILPL2Q969X0 211 aa19.23■□□□□ 0.67
CDC42-203ENST00000400259 METTL22Q9BUU2 404 aaPredicted RBP19.23■□□□□ 0.67
CDC42-203ENST00000400259 NUP188Q5SRE5 1749 aa19.23■□□□□ 0.67
CDC42-203ENST00000400259 NEXNQ0ZGT2 675 aa19.23■□□□□ 0.67
CDC42-203ENST00000400259 SUCLG2Q96I99 432 aa19.23■□□□□ 0.67
CDC42-203ENST00000400259 CARD10Q9BWT7 1032 aa19.23■□□□□ 0.67
CDC42-203ENST00000400259 USP16Q9Y5T5 823 aa19.23■□□□□ 0.67
CDC42-203ENST00000400259 NEURL1BA8MQ27 555 aa19.22■□□□□ 0.67
CDC42-203ENST00000400259 RAB3GAP1Q15042 981 aa19.22■□□□□ 0.67
CDC42-203ENST00000400259 NKX1-1Q15270 411 aaPredicted RBP19.22■□□□□ 0.67
CDC42-203ENST00000400259 TOM1L2Q6ZVM7 507 aa19.22■□□□□ 0.67
CDC42-203ENST00000400259 COPS6Q7L5N1 327 aa19.22■□□□□ 0.67
CDC42-203ENST00000400259 ZCRB1Q8TBF4 217 aaKnown RBP19.22■□□□□ 0.67
CDC42-203ENST00000400259 ERBB4Q15303 1308 aa19.22■□□□□ 0.67
CDC42-203ENST00000400259 COL15A1P39059 1388 aa19.22■□□□□ 0.67
CDC42-203ENST00000400259 ST18O60284 1047 aa19.22■□□□□ 0.67
CDC42-203ENST00000400259 KCPQ6ZWJ8 1503 aa19.22■□□□□ 0.67
CDC42-203ENST00000400259 ERVV-2B6SEH9 535 aa19.21■□□□□ 0.67
CDC42-203ENST00000400259 HSP90AA1P07900 732 aaKnown RBP19.21■□□□□ 0.67
CDC42-203ENST00000400259 MYL6BP14649 208 aa19.21■□□□□ 0.67
CDC42-203ENST00000400259 ANAPC15P60006 121 aa19.21■□□□□ 0.67
CDC42-203ENST00000400259 GCKRQ14397 625 aa19.21■□□□□ 0.67
CDC42-203ENST00000400259 ANKRD13DQ6ZTN6 518 aa19.2■□□□□ 0.66
CDC42-203ENST00000400259 CLASRPQ8N2M8 674 aaKnown RBP19.2■□□□□ 0.66
CDC42-203ENST00000400259 BICC1Q9H694 974 aaKnown RBP19.2■□□□□ 0.66
CDC42-203ENST00000400259 BRPF3Q9ULD4 1205 aa19.2■□□□□ 0.66
CDC42-203ENST00000400259 TOGARAM1Q9Y4F4 1720 aa19.2■□□□□ 0.66
CDC42-203ENST00000400259 OS9Q13438 667 aaPredicted RBP19.2■□□□□ 0.66
CDC42-203ENST00000400259 DDX11L8A8MPP1 907 aa19.19■□□□□ 0.66
CDC42-203ENST00000400259 GLRX3O76003 335 aaKnown RBP19.19■□□□□ 0.66
CDC42-203ENST00000400259 IL2RBP14784 551 aa19.19■□□□□ 0.66
CDC42-203ENST00000400259 MCCP23508 829 aa19.19■□□□□ 0.66
CDC42-203ENST00000400259 CNTROBQ8N137 903 aa19.18■□□□□ 0.66
CDC42-203ENST00000400259 TNPO1Q92973 898 aaKnown RBP19.18■□□□□ 0.66
CDC42-203ENST00000400259 TNS2Q63HR2 1409 aa19.18■□□□□ 0.66
CDC42-203ENST00000400259 MYD88Q99836 296 aa19.17■□□□□ 0.66
CDC42-203ENST00000400259 PA2G4Q9UQ80 394 aaKnown RBP19.17■□□□□ 0.66
CDC42-203ENST00000400259 ANO2Q9NQ90 1003 aa19.17■□□□□ 0.66
CDC42-203ENST00000400259 GPATCH3Q96I76 525 aa19.16■□□□□ 0.66
CDC42-203ENST00000400259 ECHDC1Q9NTX5 307 aa19.16■□□□□ 0.66
CDC42-203ENST00000400259 TJP1Q07157 1748 aa19.16■□□□□ 0.66
CDC42-203ENST00000400259 CLEC17AQ6ZS10 378 aa19.16■□□□□ 0.66
CDC42-203ENST00000400259 PLBD2Q8NHP8 589 aa19.16■□□□□ 0.66
CDC42-203ENST00000400259 MCM2P49736 904 aa19.15■□□□□ 0.66
CDC42-203ENST00000400259 GBP4Q96PP9 640 aa19.15■□□□□ 0.66
CDC42-203ENST00000400259 COL14A1Q05707 1796 aaKnown RBP19.15■□□□□ 0.66
CDC42-203ENST00000400259 SGSM2O43147 1006 aa19.14■□□□□ 0.66
CDC42-203ENST00000400259 SASH1O94885 1247 aa19.14■□□□□ 0.66
CDC42-203ENST00000400259 G3BP1Q13283 466 aaKnown RBP eCLIP19.14■□□□□ 0.65
CDC42-203ENST00000400259 IL25Q9H293 177 aa19.14■□□□□ 0.65
CDC42-203ENST00000400259 CWC22Q9HCG8 908 aaKnown RBP19.14■□□□□ 0.65
CDC42-203ENST00000400259 FOXD4L1Q9NU39 408 aa19.14■□□□□ 0.65
CDC42-203ENST00000400259 PLCH1Q4KWH8 1693 aa19.14■□□□□ 0.65
CDC42-203ENST00000400259 IFIT2P09913 472 aaKnown RBP19.13■□□□□ 0.65
CDC42-203ENST00000400259 RTN4Q9NQC3 1192 aaKnown RBP19.13■□□□□ 0.65
CDC42-203ENST00000400259 RAD50Q92878 1312 aa19.13■□□□□ 0.65
CDC42-203ENST00000400259 COL22A1Q8NFW1 1626 aaPredicted RBP19.13■□□□□ 0.65
CDC42-203ENST00000400259 HSPA4P34932 840 aa19.13■□□□□ 0.65
CDC42-203ENST00000400259 RABL6Q3YEC7 729 aaPredicted RBP19.13■□□□□ 0.65
CDC42-203ENST00000400259 PALD1Q9ULE6 856 aa19.13■□□□□ 0.65
CDC42-203ENST00000400259 ITGB4P16144 1822 aa19.13■□□□□ 0.65
CDC42-203ENST00000400259 MAP4K4O95819 1239 aaPredicted RBP19.12■□□□□ 0.65
CDC42-203ENST00000400259 PTMSP20962 102 aa19.12■□□□□ 0.65
CDC42-203ENST00000400259 EPHA10Q5JZY3 1008 aa19.12■□□□□ 0.65
CDC42-203ENST00000400259 NBPF26B4DH59 902 aa19.12■□□□□ 0.65
CDC42-203ENST00000400259 NBPF14Q5TI25 921 aa19.12■□□□□ 0.65
CDC42-203ENST00000400259 NBPF10Q6P3W6 841 aaKnown RBP19.12■□□□□ 0.65
CDC42-203ENST00000400259 AACSQ86V21 672 aa19.12■□□□□ 0.65
CDC42-203ENST00000400259 NBPF15Q8N660 670 aa19.12■□□□□ 0.65
CDC42-203ENST00000400259 COPRSQ9NQ92 184 aa19.12■□□□□ 0.65
CDC42-203ENST00000400259 WNK3Q9BYP7 1800 aa19.11■□□□□ 0.65
CDC42-203ENST00000400259 TRAK2O60296 914 aa19.11■□□□□ 0.65
CDC42-203ENST00000400259 PIP4K2AP48426 406 aaPredicted RBP19.11■□□□□ 0.65
CDC42-203ENST00000400259 NEK4P51957 841 aa19.11■□□□□ 0.65
CDC42-203ENST00000400259 NUCB2P80303 420 aa19.11■□□□□ 0.65
CDC42-203ENST00000400259 CYP2E1P05181 493 aaPredicted RBP19.11■□□□□ 0.65
CDC42-203ENST00000400259 CASP7P55210 303 aa19.11■□□□□ 0.65
CDC42-203ENST00000400259 EVA1CP58658 441 aa19.11■□□□□ 0.65
CDC42-203ENST00000400259 RFX5P48382 616 aaPredicted RBP19.1■□□□□ 0.65
CDC42-203ENST00000400259 EAF2Q96CJ1 260 aaPredicted RBP19.1■□□□□ 0.65
CDC42-203ENST00000400259 LSG1Q9H089 658 aaKnown RBP19.1■□□□□ 0.65
CDC42-203ENST00000400259 STRN4Q9NRL3 753 aa19.1■□□□□ 0.65
CDC42-203ENST00000400259 AHDC1Q5TGY3 1603 aaPredicted RBP19.1■□□□□ 0.65
CDC42-203ENST00000400259 EVI5LQ96CN4 794 aa19.09■□□□□ 0.65
CDC42-203ENST00000400259 SSFA2P28290 1259 aa19.09■□□□□ 0.65
CDC42-203ENST00000400259 RUFY2Q8WXA3 655 aa19.09■□□□□ 0.65
CDC42-203ENST00000400259 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.09■□□□□ 0.65
CDC42-203ENST00000400259 ROBO1Q9Y6N7 1651 aa19.09■□□□□ 0.65
CDC42-203ENST00000400259 LRP6O75581 1613 aa19.08■□□□□ 0.65
CDC42-203ENST00000400259 UBE3BQ7Z3V4 1068 aa19.08■□□□□ 0.64
CDC42-203ENST00000400259 DDX54Q8TDD1 881 aaKnown RBP19.08■□□□□ 0.64
CDC42-203ENST00000400259 COL16A1Q07092 1604 aaPredicted RBP19.08■□□□□ 0.64
CDC42-203ENST00000400259 DISP2A7MBM2 1401 aa19.08■□□□□ 0.64
CDC42-203ENST00000400259 CUL4AQ13619 759 aa19.07■□□□□ 0.64
CDC42-203ENST00000400259 TMX3Q96JJ7 454 aa19.07■□□□□ 0.64
CDC42-203ENST00000400259 A0A087WZG4 1122 aa19.07■□□□□ 0.64
CDC42-203ENST00000400259 DIAPH3Q9NSV4 1193 aa19.07■□□□□ 0.64
CDC42-203ENST00000400259 H7C1W4 665 aa19.06■□□□□ 0.64
CDC42-203ENST00000400259 PTPN12Q05209 780 aaKnown RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms