RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 PHF8Q9UPP1 1060 aa15.94■□□□□ 0.14
VAPA-202ENST00000400000 ANKRD30BQ9BXX2 1392 aa15.94■□□□□ 0.14
VAPA-202ENST00000400000 MYO1BO43795 1136 aa15.94■□□□□ 0.14
VAPA-202ENST00000400000 KIF4BQ2VIQ3 1234 aa15.94■□□□□ 0.14
VAPA-202ENST00000400000 C16orf71Q8IYS4 520 aaPredicted RBP15.94■□□□□ 0.14
VAPA-202ENST00000400000 EIF3JO75822 258 aaKnown RBP15.94■□□□□ 0.14
VAPA-202ENST00000400000 NOP2P46087 812 aaKnown RBP15.94■□□□□ 0.14
VAPA-202ENST00000400000 MTIF2P46199 727 aaKnown RBP15.94■□□□□ 0.14
VAPA-202ENST00000400000 TMEM67Q5HYA8 995 aa15.94■□□□□ 0.14
VAPA-202ENST00000400000 SLC26A6Q9BXS9 759 aa15.94■□□□□ 0.14
VAPA-202ENST00000400000 VEZTQ9HBM0 779 aa15.94■□□□□ 0.14
VAPA-202ENST00000400000 GOLGA6L7A0A1B0GV03 622 aa15.93■□□□□ 0.14
VAPA-202ENST00000400000 NF2P35240 595 aa15.93■□□□□ 0.14
VAPA-202ENST00000400000 CATIPQ7Z7H3 387 aa15.93■□□□□ 0.14
VAPA-202ENST00000400000 GJC1P36383 396 aa15.93■□□□□ 0.14
VAPA-202ENST00000400000 CCDC61Q9Y6R9 512 aa15.93■□□□□ 0.14
VAPA-202ENST00000400000 CCDC66A2RUB6 948 aa15.93■□□□□ 0.14
VAPA-202ENST00000400000 RBM27Q9P2N5 1060 aaKnown RBP15.93■□□□□ 0.14
VAPA-202ENST00000400000 TMEM266Q2M3C6 531 aa15.93■□□□□ 0.14
VAPA-202ENST00000400000 NBPF6Q5VWK0 638 aa15.93■□□□□ 0.14
VAPA-202ENST00000400000 LDHAL6AQ6ZMR3 332 aa15.93■□□□□ 0.14
VAPA-202ENST00000400000 NBPF5PQ86XG9 351 aaPredicted RBP15.93■□□□□ 0.14
VAPA-202ENST00000400000 TXLNBQ8N3L3 684 aa15.93■□□□□ 0.14
VAPA-202ENST00000400000 SSH1Q8WYL5 1049 aa15.93■□□□□ 0.14
VAPA-202ENST00000400000 NBPF4Q96M43 638 aa15.93■□□□□ 0.14
VAPA-202ENST00000400000 RNF216Q9NWF9 866 aaPredicted RBP15.92■□□□□ 0.14
VAPA-202ENST00000400000 TOP1P11387 765 aaKnown RBP15.92■□□□□ 0.14
VAPA-202ENST00000400000 ARL1P40616 181 aaPredicted RBP15.92■□□□□ 0.14
VAPA-202ENST00000400000 TMCO3Q6UWJ1 677 aa15.92■□□□□ 0.14
VAPA-202ENST00000400000 GRIN2BQ13224 1484 aa15.92■□□□□ 0.14
VAPA-202ENST00000400000 ATP6V1AP38606 617 aa15.92■□□□□ 0.14
VAPA-202ENST00000400000 SSFA2P28290 1259 aa15.92■□□□□ 0.14
VAPA-202ENST00000400000 CCDC91Q7Z6B0 441 aa15.92■□□□□ 0.14
VAPA-202ENST00000400000 SLC52A1Q9NWF4 448 aa15.92■□□□□ 0.14
VAPA-202ENST00000400000 ZBTB21Q9ULJ3 1066 aa15.92■□□□□ 0.14
VAPA-202ENST00000400000 IQCEQ6IPM2 695 aa15.92■□□□□ 0.14
VAPA-202ENST00000400000 BACH2Q9BYV9 841 aa15.92■□□□□ 0.14
VAPA-202ENST00000400000 SP4Q02446 784 aa15.91■□□□□ 0.14
VAPA-202ENST00000400000 AAMPQ13685 434 aa15.91■□□□□ 0.14
VAPA-202ENST00000400000 CCDC40Q4G0X9 1142 aa15.91■□□□□ 0.14
VAPA-202ENST00000400000 FCHSD2O94868 740 aa15.91■□□□□ 0.14
VAPA-202ENST00000400000 LMAN1P49257 510 aa15.91■□□□□ 0.14
VAPA-202ENST00000400000 SLC39A6Q13433 755 aa15.91■□□□□ 0.14
VAPA-202ENST00000400000 UBE3BQ7Z3V4 1068 aa15.91■□□□□ 0.14
VAPA-202ENST00000400000 FSIP1Q8NA03 581 aa15.91■□□□□ 0.14
VAPA-202ENST00000400000 STX8Q9UNK0 236 aa15.91■□□□□ 0.14
VAPA-202ENST00000400000 ST5P78524 1137 aa15.91■□□□□ 0.14
VAPA-202ENST00000400000 RNF187Q5TA31 235 aaPredicted RBP15.91■□□□□ 0.14
VAPA-202ENST00000400000 KAT14Q9H8E8 782 aa15.91■□□□□ 0.14
VAPA-202ENST00000400000 ZNF408Q9H9D4 720 aa15.91■□□□□ 0.14
VAPA-202ENST00000400000 HLTFQ14527 1009 aaKnown RBP eCLIP15.91■□□□□ 0.14
VAPA-202ENST00000400000 TCEANC2Q96MN5 208 aa15.91■□□□□ 0.14
VAPA-202ENST00000400000 CLIP2Q9UDT6 1046 aa15.91■□□□□ 0.14
VAPA-202ENST00000400000 CRACR2AQ9BSW2 395 aa15.91■□□□□ 0.14
VAPA-202ENST00000400000 SBNO2Q9Y2G9 1366 aa15.9■□□□□ 0.14
VAPA-202ENST00000400000 TMEM110-MUSTN1A8MSY1 372 aa15.9■□□□□ 0.14
VAPA-202ENST00000400000 AFMP43652 599 aa15.9■□□□□ 0.14
VAPA-202ENST00000400000 RBM25P49756 843 aaKnown RBP15.9■□□□□ 0.14
VAPA-202ENST00000400000 SMC1AQ14683 1233 aaKnown RBP15.9■□□□□ 0.14
VAPA-202ENST00000400000 GLRX3O76003 335 aaKnown RBP15.9■□□□□ 0.14
VAPA-202ENST00000400000 GJB2P29033 226 aa15.9■□□□□ 0.14
VAPA-202ENST00000400000 CETN2P41208 172 aa15.9■□□□□ 0.14
VAPA-202ENST00000400000 TMC6Q7Z403 805 aa15.9■□□□□ 0.14
VAPA-202ENST00000400000 UBXN4Q92575 508 aa15.9■□□□□ 0.14
VAPA-202ENST00000400000 DNAAF4Q8WXU2 420 aa15.9■□□□□ 0.14
VAPA-202ENST00000400000 MAP3K9P80192 1104 aa15.89■□□□□ 0.13
VAPA-202ENST00000400000 ATP2C2O75185 946 aa15.89■□□□□ 0.13
VAPA-202ENST00000400000 MRPS9P82933 396 aaKnown RBP15.89■□□□□ 0.13
VAPA-202ENST00000400000 NECAB1Q8N987 351 aa15.89■□□□□ 0.13
VAPA-202ENST00000400000 CDK13Q14004 1512 aaKnown RBP15.89■□□□□ 0.13
VAPA-202ENST00000400000 KIF5CO60282 957 aa15.89■□□□□ 0.13
VAPA-202ENST00000400000 USP16Q9Y5T5 823 aa15.89■□□□□ 0.13
VAPA-202ENST00000400000 FAM170AA1A519 330 aa15.89■□□□□ 0.13
VAPA-202ENST00000400000 MCM4P33991 863 aa15.89■□□□□ 0.13
VAPA-202ENST00000400000 C16orf45Q96MC5 204 aaPredicted RBP15.89■□□□□ 0.13
VAPA-202ENST00000400000 BAG4O95429 457 aaKnown RBP15.88■□□□□ 0.13
VAPA-202ENST00000400000 HOOK3Q86VS8 718 aa15.88■□□□□ 0.13
VAPA-202ENST00000400000 FAM107BQ9H098 131 aa15.88■□□□□ 0.13
VAPA-202ENST00000400000 PTPN14Q15678 1187 aa15.88■□□□□ 0.13
VAPA-202ENST00000400000 ANKRD24Q8TF21 1146 aa15.88■□□□□ 0.13
VAPA-202ENST00000400000 USP25Q9UHP3 1055 aa15.88■□□□□ 0.13
VAPA-202ENST00000400000 SFPQP23246 707 aaKnown RBP eCLIP15.88■□□□□ 0.138e-6■■■■□ 25.1
VAPA-202ENST00000400000 CABP5Q9NP86 173 aa15.88■□□□□ 0.13
VAPA-202ENST00000400000 HEATR3Q7Z4Q2 680 aa15.88■□□□□ 0.13
VAPA-202ENST00000400000 BIN2Q9UBW5 565 aaPredicted RBP15.88■□□□□ 0.13
VAPA-202ENST00000400000 CHST3Q7LGC8 479 aa15.87■□□□□ 0.13
VAPA-202ENST00000400000 PAIP2Q9BPZ3 127 aaKnown RBP15.87■□□□□ 0.13
VAPA-202ENST00000400000 ARHGEF11O15085 1522 aa15.87■□□□□ 0.13
VAPA-202ENST00000400000 ARID5AQ03989 594 aa15.87■□□□□ 0.13
VAPA-202ENST00000400000 CALML4Q96GE6 196 aa15.87■□□□□ 0.13
VAPA-202ENST00000400000 GJA3Q9Y6H8 435 aa15.87■□□□□ 0.13
VAPA-202ENST00000400000 SLFN5Q08AF3 891 aa15.87■□□□□ 0.13
VAPA-202ENST00000400000 SPECC1Q5M775 1068 aa15.87■□□□□ 0.13
VAPA-202ENST00000400000 SYNCQ9H7C4 482 aa15.87■□□□□ 0.13
VAPA-202ENST00000400000 CEP63Q96MT8 703 aa15.86■□□□□ 0.13
VAPA-202ENST00000400000 RPAP2Q8IXW5 612 aaPredicted RBP15.86■□□□□ 0.13
VAPA-202ENST00000400000 OTUD6BQ8N6M0 293 aa15.86■□□□□ 0.13
VAPA-202ENST00000400000 CALM1P0DP23 149 aa15.86■□□□□ 0.13
VAPA-202ENST00000400000 CALM2P0DP24 149 aa15.86■□□□□ 0.13
VAPA-202ENST00000400000 CALM3P0DP25 149 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms