RNA–Protein interactions for RNA: ENST00000398452.6

SKA1-202, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA1, Length 979 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-202ENST00000398452 ZNF330Q9Y3S2 320 aaPredicted RBP18■□□□□ 0.47
SKA1-202ENST00000398452 RGPD3A6NKT7 1758 aaPredicted RBP17.99■□□□□ 0.47
SKA1-202ENST00000398452 RGPD4Q7Z3J3 1758 aa17.99■□□□□ 0.47
SKA1-202ENST00000398452 ANXA1P04083 346 aa17.99■□□□□ 0.47
SKA1-202ENST00000398452 AIMP1Q12904 312 aaKnown RBP17.99■□□□□ 0.47
SKA1-202ENST00000398452 ITPRIPQ8IWB1 547 aa17.99■□□□□ 0.47
SKA1-202ENST00000398452 A1BGP04217 495 aa17.98■□□□□ 0.47
SKA1-202ENST00000398452 SLC4A10Q6U841 1118 aa17.98■□□□□ 0.47
SKA1-202ENST00000398452 G2E3Q7L622 706 aa17.98■□□□□ 0.47
SKA1-202ENST00000398452 RIC3Q7Z5B4 369 aa17.98■□□□□ 0.47
SKA1-202ENST00000398452 PANK1Q8TE04 598 aa17.98■□□□□ 0.47
SKA1-202ENST00000398452 ARXQ96QS3 562 aa17.98■□□□□ 0.47
SKA1-202ENST00000398452 PHAXQ9H814 394 aaKnown RBP17.98■□□□□ 0.47
SKA1-202ENST00000398452 LAMB4A4D0S4 1761 aa17.98■□□□□ 0.47
SKA1-202ENST00000398452 CACNA1FO60840 1977 aa17.97■□□□□ 0.47
SKA1-202ENST00000398452 CYP19A1P11511 503 aaPredicted RBP17.97■□□□□ 0.47
SKA1-202ENST00000398452 KCNQ4P56696 695 aa17.97■□□□□ 0.47
SKA1-202ENST00000398452 KIF6Q6ZMV9 814 aa17.97■□□□□ 0.47
SKA1-202ENST00000398452 XAGE3Q8WTP9 111 aa17.97■□□□□ 0.47
SKA1-202ENST00000398452 CRBNQ96SW2 442 aa17.97■□□□□ 0.47
SKA1-202ENST00000398452 DDX19BQ9UMR2 479 aa17.97■□□□□ 0.47
SKA1-202ENST00000398452 COG6Q9Y2V7 657 aa17.97■□□□□ 0.47
SKA1-202ENST00000398452 C5P01031 1676 aa17.96■□□□□ 0.47
SKA1-202ENST00000398452 BTAF1O14981 1849 aa17.96■□□□□ 0.47
SKA1-202ENST00000398452 PRKAR2AP13861 404 aaKnown RBP17.96■□□□□ 0.47
SKA1-202ENST00000398452 CCT4P50991 539 aaKnown RBP17.96■□□□□ 0.47
SKA1-202ENST00000398452 NEXNQ0ZGT2 675 aa17.96■□□□□ 0.47
SKA1-202ENST00000398452 PDIA6Q15084 440 aa17.96■□□□□ 0.47
SKA1-202ENST00000398452 SLC27A3Q5K4L6 730 aa17.96■□□□□ 0.47
SKA1-202ENST00000398452 C20orf194Q5TEA3 1177 aa17.96■□□□□ 0.47
SKA1-202ENST00000398452 COPS6Q7L5N1 327 aa17.96■□□□□ 0.47
SKA1-202ENST00000398452 CCDC87Q9NVE4 849 aa17.96■□□□□ 0.47
SKA1-202ENST00000398452 PIP4K2AP48426 406 aaPredicted RBP17.95■□□□□ 0.46
SKA1-202ENST00000398452 MVPQ14764 893 aaKnown RBP17.95■□□□□ 0.46
SKA1-202ENST00000398452 PROSER3Q2NL68 480 aa17.95■□□□□ 0.46
SKA1-202ENST00000398452 KSR2Q6VAB6 950 aa17.95■□□□□ 0.46
SKA1-202ENST00000398452 SLC4A9Q96Q91 983 aa17.95■□□□□ 0.46
SKA1-202ENST00000398452 LRRC4BQ9NT99 713 aa17.95■□□□□ 0.46
SKA1-202ENST00000398452 IL6STP40189 918 aaPredicted RBP17.94■□□□□ 0.46
SKA1-202ENST00000398452 CRKLP46109 303 aaKnown RBP17.94■□□□□ 0.46
SKA1-202ENST00000398452 AAMPQ13685 434 aa17.94■□□□□ 0.46
SKA1-202ENST00000398452 ZNF827Q17R98 1081 aa17.94■□□□□ 0.46
SKA1-202ENST00000398452 ANKRD13DQ6ZTN6 518 aa17.94■□□□□ 0.46
SKA1-202ENST00000398452 TMEM57Q8N5G2 664 aa17.94■□□□□ 0.46
SKA1-202ENST00000398452 DNAAF4Q8WXU2 420 aa17.94■□□□□ 0.46
SKA1-202ENST00000398452 ABCC4O15439 1325 aa17.94■□□□□ 0.46
SKA1-202ENST00000398452 A0A087WZG4 1122 aa17.93■□□□□ 0.46
SKA1-202ENST00000398452 PI4KAP2A4QPH2 592 aa17.93■□□□□ 0.46
SKA1-202ENST00000398452 ITPK1Q13572 414 aa17.93■□□□□ 0.46
SKA1-202ENST00000398452 PI4KAP1Q8N8J0 262 aa17.93■□□□□ 0.46
SKA1-202ENST00000398452 EXOC6Q8TAG9 804 aa17.93■□□□□ 0.46
SKA1-202ENST00000398452 MAP3K2Q9Y2U5 619 aa17.93■□□□□ 0.46
SKA1-202ENST00000398452 CASZ1Q86V15 1759 aa17.93■□□□□ 0.46
SKA1-202ENST00000398452 NBPF26B4DH59 902 aa17.92■□□□□ 0.46
SKA1-202ENST00000398452 F6X3S4 739 aa17.92■□□□□ 0.46
SKA1-202ENST00000398452 NBPF10Q6P3W6 841 aaKnown RBP17.92■□□□□ 0.46
SKA1-202ENST00000398452 NBPF15Q8N660 670 aa17.92■□□□□ 0.46
SKA1-202ENST00000398452 AK7Q96M32 723 aa17.92■□□□□ 0.46
SKA1-202ENST00000398452 TNNQ9UQP3 1299 aa17.92■□□□□ 0.46
SKA1-202ENST00000398452 ZBTB1Q9Y2K1 713 aa17.92■□□□□ 0.46
SKA1-202ENST00000398452 RLBP1P12271 317 aa17.91■□□□□ 0.46
SKA1-202ENST00000398452 PTGER2P43116 358 aa17.91■□□□□ 0.46
SKA1-202ENST00000398452 RC3H1Q5TC82 1133 aaKnown RBP17.91■□□□□ 0.46
SKA1-202ENST00000398452 INTS3Q68E01 1043 aaKnown RBP17.91■□□□□ 0.46
SKA1-202ENST00000398452 PLBD2Q8NHP8 589 aa17.91■□□□□ 0.46
SKA1-202ENST00000398452 SRCIN1Q9C0H9 1055 aa17.91■□□□□ 0.46
SKA1-202ENST00000398452 CNTNAP4Q9C0A0 1308 aa17.91■□□□□ 0.46
SKA1-202ENST00000398452 LINC00116Q8NCU8 138 aa17.9■□□□□ 0.46
SKA1-202ENST00000398452 PPP4R2Q9NY27 417 aa17.9■□□□□ 0.46
SKA1-202ENST00000398452 PXDNLA1KZ92 1463 aa17.89■□□□□ 0.45
SKA1-202ENST00000398452 HSP90AB3PQ58FF7 597 aa17.89■□□□□ 0.45
SKA1-202ENST00000398452 INTS5Q6P9B9 1019 aaKnown RBP17.89■□□□□ 0.45
SKA1-202ENST00000398452 KLHL34Q8N239 644 aa17.89■□□□□ 0.45
SKA1-202ENST00000398452 MTFR1LQ9H019 292 aa17.89■□□□□ 0.45
SKA1-202ENST00000398452 HDAC5Q9UQL6 1122 aa17.89■□□□□ 0.45
SKA1-202ENST00000398452 RTCBQ9Y3I0 505 aaKnown RBP17.89■□□□□ 0.45
SKA1-202ENST00000398452 ZNF831Q5JPB2 1677 aa17.89■□□□□ 0.45
SKA1-202ENST00000398452 TJP1Q07157 1748 aa17.89■□□□□ 0.45
SKA1-202ENST00000398452 YY1P25490 414 aa17.88■□□□□ 0.45
SKA1-202ENST00000398452 DZIP3Q86Y13 1208 aaKnown RBP17.88■□□□□ 0.45
SKA1-202ENST00000398452 FHDC1Q9C0D6 1143 aaPredicted RBP17.88■□□□□ 0.45
SKA1-202ENST00000398452 ZBTB3Q9H5J0 574 aa17.88■□□□□ 0.45
SKA1-202ENST00000398452 CICQ96RK0 1608 aaPredicted RBP17.87■□□□□ 0.45
SKA1-202ENST00000398452 GNPATO15228 680 aa17.87■□□□□ 0.45
SKA1-202ENST00000398452 ALDH1L1O75891 902 aa17.87■□□□□ 0.45
SKA1-202ENST00000398452 TTLL7Q6ZT98 887 aa17.87■□□□□ 0.45
SKA1-202ENST00000398452 LRP10Q7Z4F1 713 aa17.87■□□□□ 0.45
SKA1-202ENST00000398452 MYD88Q99836 296 aa17.87■□□□□ 0.45
SKA1-202ENST00000398452 METTL22Q9BUU2 404 aaPredicted RBP17.87■□□□□ 0.45
SKA1-202ENST00000398452 TFCP2L1Q9NZI6 479 aa17.87■□□□□ 0.45
SKA1-202ENST00000398452 ZNF652Q9Y2D9 606 aa17.87■□□□□ 0.45
SKA1-202ENST00000398452 RPS6KA4O75676 772 aa17.86■□□□□ 0.45
SKA1-202ENST00000398452 GNAI3P08754 354 aa17.86■□□□□ 0.45
SKA1-202ENST00000398452 EIF5P55010 431 aaKnown RBP17.86■□□□□ 0.45
SKA1-202ENST00000398452 LINS1Q8NG48 757 aa17.86■□□□□ 0.45
SKA1-202ENST00000398452 CCDC136Q96JN2 1154 aa17.86■□□□□ 0.45
SKA1-202ENST00000398452 C9orf78Q9NZ63 289 aaPredicted RBP17.86■□□□□ 0.45
SKA1-202ENST00000398452 MAP3K15Q6ZN16 1313 aa17.86■□□□□ 0.45
SKA1-202ENST00000398452 ADCY9O60503 1353 aa17.86■□□□□ 0.45
SKA1-202ENST00000398452 LY75O60449 1722 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms