RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 HYPKQ9NX55 129 aa18.47■□□□□ 0.55
HDDC2-202ENST00000398153 GPR162Q16538 588 aa18.46■□□□□ 0.55
HDDC2-202ENST00000398153 BICDL1Q6ZP65 573 aa18.46■□□□□ 0.55
HDDC2-202ENST00000398153 NUP98P52948 1817 aa18.45■□□□□ 0.54
HDDC2-202ENST00000398153 GRIN3BO60391 1043 aa18.45■□□□□ 0.54
HDDC2-202ENST00000398153 GIGYF2Q6Y7W6 1299 aaKnown RBP18.45■□□□□ 0.54
HDDC2-202ENST00000398153 MYH16Q9H6N6 1097 aa18.45■□□□□ 0.54
HDDC2-202ENST00000398153 PXDNLA1KZ92 1463 aa18.45■□□□□ 0.54
HDDC2-202ENST00000398153 KIAA1551Q9HCM1 1747 aa18.44■□□□□ 0.54
HDDC2-202ENST00000398153 ATP10DQ9P241 1426 aa18.44■□□□□ 0.54
HDDC2-202ENST00000398153 HLFQ16534 295 aa18.44■□□□□ 0.54
HDDC2-202ENST00000398153 CCDC30Q5VVM6 783 aa18.44■□□□□ 0.54
HDDC2-202ENST00000398153 TPTE2Q6XPS3 522 aa18.44■□□□□ 0.54
HDDC2-202ENST00000398153 TTLL7Q6ZT98 887 aa18.44■□□□□ 0.54
HDDC2-202ENST00000398153 C8orf58Q8NAV2 365 aa18.44■□□□□ 0.54
HDDC2-202ENST00000398153 CHPF2Q9P2E5 772 aa18.44■□□□□ 0.54
HDDC2-202ENST00000398153 NIP7Q9Y221 180 aaKnown RBP eCLIP18.44■□□□□ 0.54
HDDC2-202ENST00000398153 SALL2Q9Y467 1007 aaPredicted RBP18.44■□□□□ 0.54
HDDC2-202ENST00000398153 ZNF521Q96K83 1311 aa18.44■□□□□ 0.54
HDDC2-202ENST00000398153 GOLGA2Q08379 1002 aa18.43■□□□□ 0.54
HDDC2-202ENST00000398153 PROSER3Q2NL68 480 aa18.43■□□□□ 0.54
HDDC2-202ENST00000398153 HSP90AB3PQ58FF7 597 aa18.43■□□□□ 0.54
HDDC2-202ENST00000398153 COPS6Q7L5N1 327 aa18.43■□□□□ 0.54
HDDC2-202ENST00000398153 CNBD1Q8NA66 436 aa18.43■□□□□ 0.54
HDDC2-202ENST00000398153 NECTIN2Q92692 538 aa18.43■□□□□ 0.54
HDDC2-202ENST00000398153 TSR2Q969E8 191 aaKnown RBP18.43■□□□□ 0.54
HDDC2-202ENST00000398153 BRIP1Q9BX63 1249 aa18.43■□□□□ 0.54
HDDC2-202ENST00000398153 PDE6BP35913 854 aa18.42■□□□□ 0.54
HDDC2-202ENST00000398153 ST5P78524 1137 aa18.42■□□□□ 0.54
HDDC2-202ENST00000398153 PRR5LQ6MZQ0 368 aa18.42■□□□□ 0.54
HDDC2-202ENST00000398153 NBPF5PQ86XG9 351 aaPredicted RBP18.42■□□□□ 0.54
HDDC2-202ENST00000398153 MIER1Q8N108 512 aa18.42■□□□□ 0.54
HDDC2-202ENST00000398153 NYXQ9GZU5 481 aa18.42■□□□□ 0.54
HDDC2-202ENST00000398153 FANCIQ9NVI1 1328 aa18.42■□□□□ 0.54
HDDC2-202ENST00000398153 IBTKQ9P2D0 1353 aaPredicted RBP18.42■□□□□ 0.54
HDDC2-202ENST00000398153 N4BP2Q86UW6 1770 aaPredicted RBP18.41■□□□□ 0.54
HDDC2-202ENST00000398153 SENP3-EIF4A1A0A087X0R7 540 aa18.41■□□□□ 0.54
HDDC2-202ENST00000398153 A0A0G2JLW4 131 aa18.41■□□□□ 0.54
HDDC2-202ENST00000398153 ELL2O00472 640 aaPredicted RBP18.41■□□□□ 0.54
HDDC2-202ENST00000398153 NPHP1O15259 732 aa18.41■□□□□ 0.54
HDDC2-202ENST00000398153 DPEP1P16444 411 aa18.41■□□□□ 0.54
HDDC2-202ENST00000398153 TWISTNBQ3B726 338 aaPredicted RBP18.41■□□□□ 0.54
HDDC2-202ENST00000398153 ZNF34Q8IZ26 560 aa18.41■□□□□ 0.54
HDDC2-202ENST00000398153 XAGE3Q8WTP9 111 aa18.41■□□□□ 0.54
HDDC2-202ENST00000398153 ZBTB3Q9H5J0 574 aa18.41■□□□□ 0.54
HDDC2-202ENST00000398153 PIM2Q9P1W9 311 aa18.41■□□□□ 0.54
HDDC2-202ENST00000398153 ANXA1P04083 346 aa18.4■□□□□ 0.54
HDDC2-202ENST00000398153 KCNA3P22001 575 aa18.4■□□□□ 0.54
HDDC2-202ENST00000398153 PARP10Q53GL7 1025 aa18.4■□□□□ 0.54
HDDC2-202ENST00000398153 ANKRD13DQ6ZTN6 518 aa18.4■□□□□ 0.54
HDDC2-202ENST00000398153 PLBD2Q8NHP8 589 aa18.4■□□□□ 0.54
HDDC2-202ENST00000398153 BRCA1P38398 1863 aaKnown RBP18.39■□□□□ 0.54
HDDC2-202ENST00000398153 H0YIN7 160 aa18.39■□□□□ 0.53
HDDC2-202ENST00000398153 AIMP1Q12904 312 aaKnown RBP18.39■□□□□ 0.53
HDDC2-202ENST00000398153 PELP1Q8IZL8 1130 aaKnown RBP18.39■□□□□ 0.53
HDDC2-202ENST00000398153 TSPYL6Q8N831 410 aa18.39■□□□□ 0.53
HDDC2-202ENST00000398153 STK31Q9BXU1 1019 aa18.39■□□□□ 0.53
HDDC2-202ENST00000398153 YBX3P16989 372 aaKnown RBP eCLIP18.38■□□□□ 0.532e-9■□□□□ 10.6
HDDC2-202ENST00000398153 PPP1R42Q7Z4L9 355 aa18.38■□□□□ 0.53
HDDC2-202ENST00000398153 RNF123Q5XPI4 1314 aa18.38■□□□□ 0.53
HDDC2-202ENST00000398153 CHD4Q14839 1912 aa18.37■□□□□ 0.53
HDDC2-202ENST00000398153 CACNA1FO60840 1977 aa18.37■□□□□ 0.53
HDDC2-202ENST00000398153 GOLGB1Q14789 3259 aaKnown RBP18.37■□□□□ 0.53
HDDC2-202ENST00000398153 E9PSI1 815 aa18.37■□□□□ 0.53
HDDC2-202ENST00000398153 TCIRG1Q13488 830 aa18.37■□□□□ 0.53
HDDC2-202ENST00000398153 DLEC1Q9Y238 1755 aa18.37■□□□□ 0.53
HDDC2-202ENST00000398153 KLRG2A4D1S0 409 aaPredicted RBP18.36■□□□□ 0.53
HDDC2-202ENST00000398153 DDX58O95786 925 aaKnown RBP18.36■□□□□ 0.53
HDDC2-202ENST00000398153 GTF2E1P29083 439 aaPredicted RBP18.36■□□□□ 0.53
HDDC2-202ENST00000398153 DALRD3Q5D0E6 543 aaKnown RBP18.36■□□□□ 0.53
HDDC2-202ENST00000398153 ANKRD36CQ5JPF3 1778 aa18.36■□□□□ 0.53
HDDC2-202ENST00000398153 C2CD5Q86YS7 1000 aa18.36■□□□□ 0.53
HDDC2-202ENST00000398153 ANKRD31Q8N7Z5 1873 aa18.36■□□□□ 0.53
HDDC2-202ENST00000398153 SPINK5Q9NQ38 1064 aaPredicted RBP18.36■□□□□ 0.53
HDDC2-202ENST00000398153 ARFGEF1Q9Y6D6 1849 aa18.35■□□□□ 0.53
HDDC2-202ENST00000398153 RIC1Q4ADV7 1423 aa18.35■□□□□ 0.53
HDDC2-202ENST00000398153 UBN2Q6ZU65 1347 aa18.35■□□□□ 0.53
HDDC2-202ENST00000398153 VAMP4O75379 141 aa18.35■□□□□ 0.53
HDDC2-202ENST00000398153 CHRNA5P30532 468 aa18.35■□□□□ 0.53
HDDC2-202ENST00000398153 EXOSC9Q06265 439 aaKnown RBP18.35■□□□□ 0.53
HDDC2-202ENST00000398153 BCS1LQ9Y276 419 aa18.35■□□□□ 0.53
HDDC2-202ENST00000398153 TRIM28Q13263 835 aaKnown RBP18.34■□□□□ 0.53
HDDC2-202ENST00000398153 TTLL6Q8N841 843 aa18.34■□□□□ 0.53
HDDC2-202ENST00000398153 UTRNP46939 3433 aa18.33■□□□□ 0.52
HDDC2-202ENST00000398153 SRGNP10124 158 aa18.33■□□□□ 0.52
HDDC2-202ENST00000398153 GPTP24298 496 aa18.33■□□□□ 0.52
HDDC2-202ENST00000398153 SUSD4Q5VX71 490 aa18.33■□□□□ 0.52
HDDC2-202ENST00000398153 STYK1Q6J9G0 422 aa18.33■□□□□ 0.52
HDDC2-202ENST00000398153 RIC3Q7Z5B4 369 aa18.33■□□□□ 0.52
HDDC2-202ENST00000398153 UTP14AQ9BVJ6 771 aaKnown RBP18.33■□□□□ 0.52
HDDC2-202ENST00000398153 PHAXQ9H814 394 aaKnown RBP18.33■□□□□ 0.52
HDDC2-202ENST00000398153 NTSR2O95665 410 aa18.32■□□□□ 0.52
HDDC2-202ENST00000398153 SLC4A2P04920 1241 aa18.32■□□□□ 0.52
HDDC2-202ENST00000398153 SLFN5Q08AF3 891 aa18.32■□□□□ 0.52
HDDC2-202ENST00000398153 NLRP10Q86W26 655 aa18.32■□□□□ 0.52
HDDC2-202ENST00000398153 CNKSR1Q969H4 720 aa18.32■□□□□ 0.52
HDDC2-202ENST00000398153 MASTLQ96GX5 879 aa18.32■□□□□ 0.52
HDDC2-202ENST00000398153 NPR1P16066 1061 aa18.31■□□□□ 0.52
HDDC2-202ENST00000398153 SLC10A5Q5PT55 438 aa18.31■□□□□ 0.52
HDDC2-202ENST00000398153 ZNF428Q96B54 188 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms