RNA–Protein interactions for RNA: ENST00000398148.7

KHSRP-201, Transcript of KH-type splicing regulatory protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KHSRP, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-201ENST00000398148 NOL12Q9UGY1 213 aaKnown RBP eCLIP28.24■■■□□ 2.11
KHSRP-201ENST00000398148 TAOK2Q9UL54 1235 aa28.24■■■□□ 2.11
KHSRP-201ENST00000398148 V9GYY5 206 aaPredicted RBP28.24■■■□□ 2.11
KHSRP-201ENST00000398148 GOLGA6L4A6NEF3 574 aa28.23■■■□□ 2.11
KHSRP-201ENST00000398148 SIL1Q9H173 461 aa28.23■■■□□ 2.11
KHSRP-201ENST00000398148 ST3GAL1Q11201 340 aa28.23■■■□□ 2.11
KHSRP-201ENST00000398148 DACT1Q9NYF0 836 aa28.23■■■□□ 2.11
KHSRP-201ENST00000398148 CHPF2Q9P2E5 772 aa28.23■■■□□ 2.11
KHSRP-201ENST00000398148 TRIM5Q9C035 493 aa28.23■■■□□ 2.11
KHSRP-201ENST00000398148 CLTCQ00610 1675 aaKnown RBP28.23■■■□□ 2.11
KHSRP-201ENST00000398148 GNAT3A8MTJ3 354 aa28.22■■■□□ 2.11
KHSRP-201ENST00000398148 NLRP6P59044 892 aa28.22■■■□□ 2.11
KHSRP-201ENST00000398148 CCDC8Q9H0W5 538 aaPredicted RBP28.22■■■□□ 2.11
KHSRP-201ENST00000398148 TPCN1Q9ULQ1 816 aa28.22■■■□□ 2.11
KHSRP-201ENST00000398148 ANO6Q4KMQ2 910 aa28.22■■■□□ 2.11
KHSRP-201ENST00000398148 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.22■■■□□ 2.11
KHSRP-201ENST00000398148 NPHP1O15259 732 aa28.21■■■□□ 2.11
KHSRP-201ENST00000398148 NDUFB9Q9Y6M9 179 aa28.21■■■□□ 2.11
KHSRP-201ENST00000398148 CCDC192P0DO97 292 aa28.21■■■□□ 2.11
KHSRP-201ENST00000398148 SSH3Q8TE77 659 aa28.21■■■□□ 2.11
KHSRP-201ENST00000398148 FUCA2Q9BTY2 467 aa28.21■■■□□ 2.11
KHSRP-201ENST00000398148 ESF1Q9H501 851 aaKnown RBP28.21■■■□□ 2.11
KHSRP-201ENST00000398148 CYP46A1Q9Y6A2 500 aa28.2■■■□□ 2.11
KHSRP-201ENST00000398148 RAB11FIP3O75154 756 aa28.2■■■□□ 2.1
KHSRP-201ENST00000398148 KIF1BPQ96EK5 621 aa28.19■■■□□ 2.1
KHSRP-201ENST00000398148 ATP6V1DQ9Y5K8 247 aa28.19■■■□□ 2.1
KHSRP-201ENST00000398148 CYB5RLQ6IPT4 315 aa28.19■■■□□ 2.1
KHSRP-201ENST00000398148 ERCC4Q92889 916 aaPredicted RBP28.19■■■□□ 2.1
KHSRP-201ENST00000398148 NUP62CLQ9H1M0 184 aa28.19■■■□□ 2.1
KHSRP-201ENST00000398148 ROBO2Q9HCK4 1378 aa28.18■■■□□ 2.1
KHSRP-201ENST00000398148 TYRO3Q06418 890 aa28.18■■■□□ 2.1
KHSRP-201ENST00000398148 ARID5BQ14865 1188 aa28.18■■■□□ 2.1
KHSRP-201ENST00000398148 EDC3Q96F86 508 aaKnown RBP28.18■■■□□ 2.1
KHSRP-201ENST00000398148 LGR6Q9HBX8 967 aa28.18■■■□□ 2.1
KHSRP-201ENST00000398148 PREX1Q8TCU6 1659 aa28.18■■■□□ 2.1
KHSRP-201ENST00000398148 CHGBP05060 677 aa28.18■■■□□ 2.1
KHSRP-201ENST00000398148 DMTNQ08495 405 aa28.18■■■□□ 2.1
KHSRP-201ENST00000398148 KLHDC4Q8TBB5 520 aa28.18■■■□□ 2.1
KHSRP-201ENST00000398148 TMEM87AQ8NBN3 555 aa28.17■■■□□ 2.1
KHSRP-201ENST00000398148 TNMDQ9H2S6 317 aa28.17■■■□□ 2.1
KHSRP-201ENST00000398148 SPTLC3Q9NUV7 552 aa28.17■■■□□ 2.1
KHSRP-201ENST00000398148 LETM1O95202 739 aaPredicted RBP28.17■■■□□ 2.1
KHSRP-201ENST00000398148 DNAJC25Q9H1X3 360 aa28.17■■■□□ 2.1
KHSRP-201ENST00000398148 CWF19L2Q2TBE0 894 aaKnown RBP28.17■■■□□ 2.1
KHSRP-201ENST00000398148 MRVI1Q9Y6F6 885 aa28.17■■■□□ 2.1
KHSRP-201ENST00000398148 MAP3K11Q16584 847 aa28.16■■■□□ 2.1
KHSRP-201ENST00000398148 AACSQ86V21 672 aa28.16■■■□□ 2.1
KHSRP-201ENST00000398148 SYTL4Q96C24 671 aaPredicted RBP28.16■■■□□ 2.1
KHSRP-201ENST00000398148 BOLA2Q9H3K6 86 aa28.16■■■□□ 2.1
KHSRP-201ENST00000398148 IFIT2P09913 472 aaKnown RBP28.16■■■□□ 2.1
KHSRP-201ENST00000398148 BICD2Q8TD16 824 aa28.16■■■□□ 2.1
KHSRP-201ENST00000398148 RBM33Q96EV2 1170 aaKnown RBP28.16■■■□□ 2.1
KHSRP-201ENST00000398148 LRRC2Q9BYS8 371 aa28.16■■■□□ 2.1
KHSRP-201ENST00000398148 RBM8AQ9Y5S9 174 aaKnown RBP28.16■■■□□ 2.1
KHSRP-201ENST00000398148 AIMP1Q12904 312 aaKnown RBP28.15■■■□□ 2.1
KHSRP-201ENST00000398148 CBX8Q9HC52 389 aa28.15■■■□□ 2.1
KHSRP-201ENST00000398148 A2ML1A8K2U0 1454 aa28.15■■■□□ 2.1
KHSRP-201ENST00000398148 LARP1Q6PKG0 1096 aaKnown RBP28.15■■■□□ 2.1
KHSRP-201ENST00000398148 OSCARQ8IYS5 282 aa28.14■■■□□ 2.1
KHSRP-201ENST00000398148 C9orf78Q9NZ63 289 aaPredicted RBP28.14■■■□□ 2.09
KHSRP-201ENST00000398148 FAM69CQ0P6D2 419 aa28.13■■■□□ 2.09
KHSRP-201ENST00000398148 CLASRPQ8N2M8 674 aaKnown RBP28.13■■■□□ 2.09
KHSRP-201ENST00000398148 TLR7Q9NYK1 1049 aaKnown RBP28.13■■■□□ 2.09
KHSRP-201ENST00000398148 JAK2O60674 1132 aa28.12■■■□□ 2.09
KHSRP-201ENST00000398148 NR1I2O75469 434 aa28.12■■■□□ 2.09
KHSRP-201ENST00000398148 KRT85P78386 507 aa28.12■■■□□ 2.09
KHSRP-201ENST00000398148 SPATA32Q96LK8 384 aa28.12■■■□□ 2.09
KHSRP-201ENST00000398148 PRAMEF22A3QJZ6 481 aa28.12■■■□□ 2.09
KHSRP-201ENST00000398148 NMIQ13287 307 aaPredicted RBP28.11■■■□□ 2.09
KHSRP-201ENST00000398148 TRMT1Q9NXH9 659 aaKnown RBP28.11■■■□□ 2.09
KHSRP-201ENST00000398148 NAP1L2Q9ULW6 460 aaPredicted RBP28.11■■■□□ 2.09
KHSRP-201ENST00000398148 SSH2Q76I76 1423 aa28.11■■■□□ 2.09
KHSRP-201ENST00000398148 GOLGA6L6A8MZA4 724 aa28.11■■■□□ 2.09
KHSRP-201ENST00000398148 TNNT1P13805 278 aa28.11■■■□□ 2.09
KHSRP-201ENST00000398148 ZKSCAN1P17029 563 aaPredicted RBP28.11■■■□□ 2.09
KHSRP-201ENST00000398148 FAM200AQ8TCP9 573 aa28.11■■■□□ 2.09
KHSRP-201ENST00000398148 DLC1Q96QB1 1528 aa28.11■■■□□ 2.09
KHSRP-201ENST00000398148 TPD52L1Q16890 204 aaPredicted RBP28.11■■■□□ 2.09
KHSRP-201ENST00000398148 CREB3L3Q68CJ9 461 aa28.11■■■□□ 2.09
KHSRP-201ENST00000398148 FTOQ9C0B1 505 aaKnown RBP eCLIP28.11■■■□□ 2.092e-14■□□□□ 8.9
KHSRP-201ENST00000398148 CEP170BQ9Y4F5 1589 aaPredicted RBP28.1■■■□□ 2.09
KHSRP-201ENST00000398148 DNAAF4Q8WXU2 420 aa28.09■■■□□ 2.09
KHSRP-201ENST00000398148 GTF2F1P35269 517 aaKnown RBP eCLIP28.09■■■□□ 2.091e-10■■■■□ 23.5
KHSRP-201ENST00000398148 MPRIPQ6WCQ1 1025 aa28.09■■■□□ 2.09
KHSRP-201ENST00000398148 CCDC144BQ3MJ40 725 aa28.08■■■□□ 2.09
KHSRP-201ENST00000398148 CCDC144CPQ8IYA2 1237 aa28.08■■■□□ 2.09
KHSRP-201ENST00000398148 GLRX3O76003 335 aaKnown RBP28.08■■■□□ 2.09
KHSRP-201ENST00000398148 FILIP1Q7Z7B0 1213 aa28.08■■■□□ 2.09
KHSRP-201ENST00000398148 PROSER3Q2NL68 480 aa28.08■■■□□ 2.09
KHSRP-201ENST00000398148 A0A0D9SFI3 127 aa28.07■■■□□ 2.08
KHSRP-201ENST00000398148 POLA2Q14181 598 aa28.07■■■□□ 2.08
KHSRP-201ENST00000398148 USP27XA6NNY8 438 aa28.07■■■□□ 2.08
KHSRP-201ENST00000398148 NCBP1Q09161 790 aaKnown RBP28.07■■■□□ 2.08
KHSRP-201ENST00000398148 VPS53Q5VIR6 699 aa28.07■■■□□ 2.08
KHSRP-201ENST00000398148 CACTINQ8WUQ7 758 aaKnown RBP28.07■■■□□ 2.08
KHSRP-201ENST00000398148 PODXL2Q9NZ53 605 aa28.07■■■□□ 2.08
KHSRP-201ENST00000398148 ZNF165P49910 485 aa28.06■■■□□ 2.08
KHSRP-201ENST00000398148 ZNF771Q7L3S4 317 aaPredicted RBP28.06■■■□□ 2.08
KHSRP-201ENST00000398148 FSD1Q9BTV5 496 aa28.06■■■□□ 2.08
KHSRP-201ENST00000398148 ZSWIM6Q9HCJ5 1215 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms