RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 CGNQ9P2M7 1197 aaKnown RBP19.14■□□□□ 0.65
CHMP1A-201ENST00000397901 CNPY2Q9Y2B0 182 aa19.14■□□□□ 0.65
CHMP1A-201ENST00000397901 NPHP4O75161 1426 aaPredicted RBP19.14■□□□□ 0.65
CHMP1A-201ENST00000397901 LRRC37A3O60309 1634 aa19.13■□□□□ 0.65
CHMP1A-201ENST00000397901 AOX1Q06278 1338 aa19.13■□□□□ 0.65
CHMP1A-201ENST00000397901 HTATSF1O43719 755 aaKnown RBP19.13■□□□□ 0.65
CHMP1A-201ENST00000397901 UVSSAQ2YD98 709 aa19.13■□□□□ 0.65
CHMP1A-201ENST00000397901 ZNF771Q7L3S4 317 aaPredicted RBP19.13■□□□□ 0.65
CHMP1A-201ENST00000397901 LTN1O94822 1766 aa19.13■□□□□ 0.65
CHMP1A-201ENST00000397901 PI4K2BQ8TCG2 481 aa19.13■□□□□ 0.65
CHMP1A-201ENST00000397901 DIAPH3Q9NSV4 1193 aa19.13■□□□□ 0.65
CHMP1A-201ENST00000397901 SNX14Q9Y5W7 946 aa19.13■□□□□ 0.65
CHMP1A-201ENST00000397901 FAM177BA6PVY3 158 aa19.12■□□□□ 0.65
CHMP1A-201ENST00000397901 DTNBO60941 627 aa19.12■□□□□ 0.65
CHMP1A-201ENST00000397901 RHPN1Q8TCX5 695 aa19.12■□□□□ 0.65
CHMP1A-201ENST00000397901 RAD50Q92878 1312 aa19.12■□□□□ 0.65
CHMP1A-201ENST00000397901 NFAT5O94916 1531 aa19.12■□□□□ 0.65
CHMP1A-201ENST00000397901 TCHHQ07283 1943 aa19.12■□□□□ 0.65
CHMP1A-201ENST00000397901 SGSM2O43147 1006 aa19.12■□□□□ 0.65
CHMP1A-201ENST00000397901 TAF7Q15545 349 aaPredicted RBP19.12■□□□□ 0.65
CHMP1A-201ENST00000397901 RASEFQ8IZ41 740 aa19.12■□□□□ 0.65
CHMP1A-201ENST00000397901 SRGAP3O43295 1099 aa19.11■□□□□ 0.65
CHMP1A-201ENST00000397901 EIF2S2P20042 333 aaKnown RBP19.11■□□□□ 0.65
CHMP1A-201ENST00000397901 U2AF2P26368 475 aaKnown RBP eCLIP19.11■□□□□ 0.65
CHMP1A-201ENST00000397901 AK2P54819 239 aa19.11■□□□□ 0.65
CHMP1A-201ENST00000397901 OGFRQ9NZT2 677 aa19.11■□□□□ 0.65
CHMP1A-201ENST00000397901 MAP3K5Q99683 1374 aa19.11■□□□□ 0.65
CHMP1A-201ENST00000397901 FAM184AQ8NB25 1140 aa19.11■□□□□ 0.65
CHMP1A-201ENST00000397901 USP25Q9UHP3 1055 aa19.11■□□□□ 0.65
CHMP1A-201ENST00000397901 RAB11FIP3O75154 756 aa19.1■□□□□ 0.65
CHMP1A-201ENST00000397901 CPA1P15085 419 aa19.1■□□□□ 0.65
CHMP1A-201ENST00000397901 CDK11BP21127 795 aaKnown RBP19.1■□□□□ 0.65
CHMP1A-201ENST00000397901 GABPB1Q06547 395 aaPredicted RBP19.1■□□□□ 0.65
CHMP1A-201ENST00000397901 CHAF1AQ13111 956 aaPredicted RBP19.1■□□□□ 0.65
CHMP1A-201ENST00000397901 CWC27Q6UX04 472 aaKnown RBP19.1■□□□□ 0.65
CHMP1A-201ENST00000397901 USHBP1Q8N6Y0 703 aa19.1■□□□□ 0.65
CHMP1A-201ENST00000397901 SPG7Q9UQ90 795 aa19.1■□□□□ 0.65
CHMP1A-201ENST00000397901 ZNF830Q96NB3 372 aaPredicted RBP19.1■□□□□ 0.65
CHMP1A-201ENST00000397901 LSG1Q9H089 658 aaKnown RBP19.1■□□□□ 0.65
CHMP1A-201ENST00000397901 NBPF7P0C2Y1 421 aaPredicted RBP19.09■□□□□ 0.65
CHMP1A-201ENST00000397901 ZSCAN22P10073 491 aaPredicted RBP19.09■□□□□ 0.65
CHMP1A-201ENST00000397901 RUFY3Q7L099 469 aa19.09■□□□□ 0.65
CHMP1A-201ENST00000397901 POLA2Q14181 598 aa19.09■□□□□ 0.65
CHMP1A-201ENST00000397901 CCDC183Q5T5S1 534 aa19.09■□□□□ 0.65
CHMP1A-201ENST00000397901 C14orf37Q86TY3 774 aa19.09■□□□□ 0.65
CHMP1A-201ENST00000397901 CNTROBQ8N137 903 aa19.09■□□□□ 0.65
CHMP1A-201ENST00000397901 TTC14Q96N46 770 aa19.09■□□□□ 0.65
CHMP1A-201ENST00000397901 FIBPO43427 364 aa19.08■□□□□ 0.65
CHMP1A-201ENST00000397901 IGSF3O75054 1194 aa19.08■□□□□ 0.65
CHMP1A-201ENST00000397901 SYT1P21579 422 aa19.08■□□□□ 0.65
CHMP1A-201ENST00000397901 ESCO1Q5FWF5 840 aa19.08■□□□□ 0.65
CHMP1A-201ENST00000397901 TAF7LQ5H9L4 462 aa19.08■□□□□ 0.65
CHMP1A-201ENST00000397901 KIF1BPQ96EK5 621 aa19.08■□□□□ 0.65
CHMP1A-201ENST00000397901 PXDNLA1KZ92 1463 aa19.08■□□□□ 0.65
CHMP1A-201ENST00000397901 STX6O43752 255 aa19.08■□□□□ 0.64
CHMP1A-201ENST00000397901 HCLS1P14317 486 aaPredicted RBP19.08■□□□□ 0.64
CHMP1A-201ENST00000397901 CTIFO43310 598 aaKnown RBP19.07■□□□□ 0.64
CHMP1A-201ENST00000397901 EPB41L2O43491 1005 aaKnown RBP19.07■□□□□ 0.64
CHMP1A-201ENST00000397901 TMEM87AQ8NBN3 555 aa19.07■□□□□ 0.64
CHMP1A-201ENST00000397901 TTC12Q9H892 705 aaPredicted RBP19.07■□□□□ 0.64
CHMP1A-201ENST00000397901 LIMCH1Q9UPQ0 1083 aa19.07■□□□□ 0.64
CHMP1A-201ENST00000397901 SMC3Q9UQE7 1217 aa19.07■□□□□ 0.64
CHMP1A-201ENST00000397901 LARGE1O95461 756 aa19.07■□□□□ 0.64
CHMP1A-201ENST00000397901 IP6K1Q92551 441 aa19.07■□□□□ 0.64
CHMP1A-201ENST00000397901 PHRF1Q9P1Y6 1649 aaKnown RBP19.06■□□□□ 0.64
CHMP1A-201ENST00000397901 VGLL3A8MV65 326 aa19.06■□□□□ 0.64
CHMP1A-201ENST00000397901 CASTP20810 708 aaKnown RBP19.06■□□□□ 0.64
CHMP1A-201ENST00000397901 PSME1Q06323 249 aa19.06■□□□□ 0.64
CHMP1A-201ENST00000397901 RIOK3O14730 519 aaKnown RBP19.06■□□□□ 0.64
CHMP1A-201ENST00000397901 ANXA1P04083 346 aa19.06■□□□□ 0.64
CHMP1A-201ENST00000397901 OS9Q13438 667 aaPredicted RBP19.06■□□□□ 0.64
CHMP1A-201ENST00000397901 C17orf53Q8N3J3 647 aaPredicted RBP19.06■□□□□ 0.64
CHMP1A-201ENST00000397901 ADCY5O95622 1261 aa19.05■□□□□ 0.64
CHMP1A-201ENST00000397901 F13A1P00488 732 aa19.05■□□□□ 0.64
CHMP1A-201ENST00000397901 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.05■□□□□ 0.64
CHMP1A-201ENST00000397901 UBE2HP62256 183 aa19.05■□□□□ 0.64
CHMP1A-201ENST00000397901 CCDC83Q8IWF9 413 aa19.05■□□□□ 0.64
CHMP1A-201ENST00000397901 CHPF2Q9P2E5 772 aa19.05■□□□□ 0.64
CHMP1A-201ENST00000397901 CACNA1FO60840 1977 aa19.04■□□□□ 0.64
CHMP1A-201ENST00000397901 DDX54Q8TDD1 881 aaKnown RBP19.04■□□□□ 0.64
CHMP1A-201ENST00000397901 PI4KAP2A4QPH2 592 aa19.03■□□□□ 0.64
CHMP1A-201ENST00000397901 PLCB2Q00722 1185 aa19.03■□□□□ 0.64
CHMP1A-201ENST00000397901 PI4KAP1Q8N8J0 262 aa19.03■□□□□ 0.64
CHMP1A-201ENST00000397901 N4BP2Q86UW6 1770 aaPredicted RBP19.03■□□□□ 0.64
CHMP1A-201ENST00000397901 CCDC66A2RUB6 948 aa19.02■□□□□ 0.64
CHMP1A-201ENST00000397901 DNAAF4Q8WXU2 420 aa19.02■□□□□ 0.64
CHMP1A-201ENST00000397901 ZBTB22O15209 634 aa19.02■□□□□ 0.64
CHMP1A-201ENST00000397901 GJB2P29033 226 aa19.02■□□□□ 0.64
CHMP1A-201ENST00000397901 PTH1RQ03431 593 aa19.02■□□□□ 0.64
CHMP1A-201ENST00000397901 SYCP1Q15431 976 aa19.02■□□□□ 0.64
CHMP1A-201ENST00000397901 BEND3Q5T5X7 828 aa19.02■□□□□ 0.64
CHMP1A-201ENST00000397901 GIMAP6Q6P9H5 292 aa19.02■□□□□ 0.64
CHMP1A-201ENST00000397901 KCNH5Q8NCM2 988 aa19.02■□□□□ 0.64
CHMP1A-201ENST00000397901 JAKMIP1Q96N16 626 aaKnown RBP19.02■□□□□ 0.64
CHMP1A-201ENST00000397901 ORAI2Q96SN7 254 aa19.02■□□□□ 0.64
CHMP1A-201ENST00000397901 BABAM1Q9NWV8 329 aa19.02■□□□□ 0.64
CHMP1A-201ENST00000397901 IRX5P78411 483 aaPredicted RBP19.01■□□□□ 0.63
CHMP1A-201ENST00000397901 DNM1Q05193 864 aaKnown RBP19.01■□□□□ 0.63
CHMP1A-201ENST00000397901 ADCK5Q3MIX3 580 aa19.01■□□□□ 0.63
CHMP1A-201ENST00000397901 PRPF40BQ6NWY9 871 aaKnown RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms