RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 SSH1Q8WYL5 1049 aa13.72□□□□□ -0.21
NUP98-205ENST00000397007 UTYO14607 1347 aa13.72□□□□□ -0.21
NUP98-205ENST00000397007 TRIM28Q13263 835 aaKnown RBP13.72□□□□□ -0.21
NUP98-205ENST00000397007 CLEC4GQ6UXB4 293 aa13.72□□□□□ -0.21
NUP98-205ENST00000397007 G2E3Q7L622 706 aa13.72□□□□□ -0.21
NUP98-205ENST00000397007 SLC16A10Q8TF71 515 aa13.72□□□□□ -0.21
NUP98-205ENST00000397007 HYPKQ9NX55 129 aa13.72□□□□□ -0.21
NUP98-205ENST00000397007 TAF1P21675 1872 aa13.72□□□□□ -0.21
NUP98-205ENST00000397007 ARHGAP45Q92619 1136 aa13.72□□□□□ -0.21
NUP98-205ENST00000397007 SMIM5Q71RC9 77 aa13.71□□□□□ -0.21
NUP98-205ENST00000397007 ISCA1Q9BUE6 129 aa13.71□□□□□ -0.21
NUP98-205ENST00000397007 UBN2Q6ZU65 1347 aa13.71□□□□□ -0.21
NUP98-205ENST00000397007 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.71□□□□□ -0.21
NUP98-205ENST00000397007 CCDC30Q5VVM6 783 aa13.71□□□□□ -0.21
NUP98-205ENST00000397007 HDGFL1Q5TGJ6 251 aa13.71□□□□□ -0.22
NUP98-205ENST00000397007 TTLL7Q6ZT98 887 aa13.71□□□□□ -0.22
NUP98-205ENST00000397007 PHAXQ9H814 394 aaKnown RBP13.71□□□□□ -0.22
NUP98-205ENST00000397007 CASP7P55210 303 aa13.7□□□□□ -0.22
NUP98-205ENST00000397007 PTPRCP08575 1304 aa13.7□□□□□ -0.22
NUP98-205ENST00000397007 KLRG2A4D1S0 409 aaPredicted RBP13.7□□□□□ -0.22
NUP98-205ENST00000397007 GNPATO15228 680 aa13.7□□□□□ -0.22
NUP98-205ENST00000397007 SALL2Q9Y467 1007 aaPredicted RBP13.7□□□□□ -0.22
NUP98-205ENST00000397007 PSME4Q14997 1843 aa13.7□□□□□ -0.22
NUP98-205ENST00000397007 HLFQ16534 295 aa13.69□□□□□ -0.22
NUP98-205ENST00000397007 PLBD2Q8NHP8 589 aa13.69□□□□□ -0.22
NUP98-205ENST00000397007 RTCBQ9Y3I0 505 aaKnown RBP13.69□□□□□ -0.22
NUP98-205ENST00000397007 DICER1Q9UPY3 1922 aaKnown RBP13.69□□□□□ -0.22
NUP98-205ENST00000397007 A0A087WZG4 1122 aa13.69□□□□□ -0.22
NUP98-205ENST00000397007 POLRMTO00411 1230 aaKnown RBP13.69□□□□□ -0.22
NUP98-205ENST00000397007 GIGYF2Q6Y7W6 1299 aaKnown RBP13.69□□□□□ -0.22
NUP98-205ENST00000397007 STK32BQ9NY57 414 aa13.69□□□□□ -0.22
NUP98-205ENST00000397007 DDR1Q08345 913 aa13.68□□□□□ -0.22
NUP98-205ENST00000397007 LAS1LQ9Y4W2 734 aaKnown RBP13.68□□□□□ -0.22
NUP98-205ENST00000397007 SBF1O95248 1867 aa13.68□□□□□ -0.22
NUP98-205ENST00000397007 IGKV5-2P06315 115 aa13.67□□□□□ -0.22
NUP98-205ENST00000397007 PIP4K2AP48426 406 aaPredicted RBP13.67□□□□□ -0.22
NUP98-205ENST00000397007 AK7Q96M32 723 aa13.67□□□□□ -0.22
NUP98-205ENST00000397007 CHMP4AQ9BY43 222 aa13.67□□□□□ -0.22
NUP98-205ENST00000397007 DUOX1Q9NRD9 1551 aa13.67□□□□□ -0.22
NUP98-205ENST00000397007 CARMIL3Q8ND23 1372 aa13.67□□□□□ -0.22
NUP98-205ENST00000397007 FLIIQ13045 1269 aa13.67□□□□□ -0.22
NUP98-205ENST00000397007 XAGE3Q8WTP9 111 aa13.67□□□□□ -0.22
NUP98-205ENST00000397007 SRP68Q9UHB9 627 aaKnown RBP13.67□□□□□ -0.22
NUP98-205ENST00000397007 FKBP8Q14318 412 aa13.66□□□□□ -0.22
NUP98-205ENST00000397007 TRAPPC3LQ5T215 181 aa13.66□□□□□ -0.22
NUP98-205ENST00000397007 BEND3Q5T5X7 828 aa13.66□□□□□ -0.22
NUP98-205ENST00000397007 ANXA1P04083 346 aa13.66□□□□□ -0.22
NUP98-205ENST00000397007 MTFR1LQ9H019 292 aa13.66□□□□□ -0.22
NUP98-205ENST00000397007 COPS6Q7L5N1 327 aa13.66□□□□□ -0.22
NUP98-205ENST00000397007 SLX4Q8IY92 1834 aa13.65□□□□□ -0.22
NUP98-205ENST00000397007 NTSR2O95665 410 aa13.65□□□□□ -0.22
NUP98-205ENST00000397007 KSR2Q6VAB6 950 aa13.65□□□□□ -0.22
NUP98-205ENST00000397007 TBC1D9BQ66K14 1250 aa13.65□□□□□ -0.22
NUP98-205ENST00000397007 DZIP3Q86Y13 1208 aaKnown RBP13.65□□□□□ -0.22
NUP98-205ENST00000397007 METTL22Q9BUU2 404 aaPredicted RBP13.65□□□□□ -0.22
NUP98-205ENST00000397007 USPL1Q5W0Q7 1092 aa13.65□□□□□ -0.23
NUP98-205ENST00000397007 R3HDM1Q15032 1099 aaKnown RBP13.64□□□□□ -0.23
NUP98-205ENST00000397007 SLC4A2P04920 1241 aa13.64□□□□□ -0.23
NUP98-205ENST00000397007 TCIRG1Q13488 830 aa13.64□□□□□ -0.23
NUP98-205ENST00000397007 SLC10A5Q5PT55 438 aa13.64□□□□□ -0.23
NUP98-205ENST00000397007 INTS3Q68E01 1043 aaKnown RBP13.64□□□□□ -0.23
NUP98-205ENST00000397007 BCAR3O75815 825 aa13.63□□□□□ -0.23
NUP98-205ENST00000397007 CANXP27824 592 aaKnown RBP13.63□□□□□ -0.23
NUP98-205ENST00000397007 NFIXQ14938 502 aa13.63□□□□□ -0.23
NUP98-205ENST00000397007 ABCC12Q96J65 1359 aa13.63□□□□□ -0.23
NUP98-205ENST00000397007 ELL2O00472 640 aaPredicted RBP13.63□□□□□ -0.23
NUP98-205ENST00000397007 RTL9Q8NET4 1388 aa13.63□□□□□ -0.23
NUP98-205ENST00000397007 TFCP2L1Q9NZI6 479 aa13.63□□□□□ -0.23
NUP98-205ENST00000397007 CDHR2Q9BYE9 1310 aa13.62□□□□□ -0.23
NUP98-205ENST00000397007 ANKRD13DQ6ZTN6 518 aa13.62□□□□□ -0.23
NUP98-205ENST00000397007 NLRP10Q86W26 655 aa13.62□□□□□ -0.23
NUP98-205ENST00000397007 PLA2G12BQ9BX93 195 aa13.62□□□□□ -0.23
NUP98-205ENST00000397007 KIF16BQ96L93 1317 aa13.61□□□□□ -0.23
NUP98-205ENST00000397007 TRIM27P14373 513 aa13.61□□□□□ -0.23
NUP98-205ENST00000397007 EIF2S2P20042 333 aaKnown RBP13.61□□□□□ -0.23
NUP98-205ENST00000397007 CRY2Q49AN0 593 aa13.61□□□□□ -0.23
NUP98-205ENST00000397007 MYL6BP14649 208 aa13.61□□□□□ -0.23
NUP98-205ENST00000397007 KAZALD1Q96I82 304 aa13.61□□□□□ -0.23
NUP98-205ENST00000397007 NEURL1BA8MQ27 555 aa13.61□□□□□ -0.23
NUP98-205ENST00000397007 H7C1W4 665 aa13.6□□□□□ -0.23
NUP98-205ENST00000397007 KCNA3P22001 575 aa13.6□□□□□ -0.23
NUP98-205ENST00000397007 TNNQ9UQP3 1299 aa13.6□□□□□ -0.23
NUP98-205ENST00000397007 NLGN1Q8N2Q7 840 aa13.6□□□□□ -0.23
NUP98-205ENST00000397007 NOB1Q9ULX3 412 aaKnown RBP13.6□□□□□ -0.23
NUP98-205ENST00000397007 TBC1D2BQ9UPU7 963 aa13.6□□□□□ -0.23
NUP98-205ENST00000397007 RLBP1P12271 317 aa13.59□□□□□ -0.23
NUP98-205ENST00000397007 TIAM2Q8IVF5 1701 aa13.59□□□□□ -0.23
NUP98-205ENST00000397007 PI4KAP2A4QPH2 592 aa13.59□□□□□ -0.23
NUP98-205ENST00000397007 PI4KAP1Q8N8J0 262 aa13.59□□□□□ -0.23
NUP98-205ENST00000397007 MAP3K2Q9Y2U5 619 aa13.59□□□□□ -0.23
NUP98-205ENST00000397007 GOLGB1Q14789 3259 aaKnown RBP13.59□□□□□ -0.23
NUP98-205ENST00000397007 SUSD4Q5VX71 490 aa13.59□□□□□ -0.23
NUP98-205ENST00000397007 RCAN3Q9UKA8 241 aa13.59□□□□□ -0.23
NUP98-205ENST00000397007 SRCAPQ6ZRS2 3230 aa13.58□□□□□ -0.24
NUP98-205ENST00000397007 ATF7IPQ6VMQ6 1270 aa13.58□□□□□ -0.24
NUP98-205ENST00000397007 NECTIN2Q92692 538 aa13.58□□□□□ -0.24
NUP98-205ENST00000397007 RFC4P35249 363 aa13.58□□□□□ -0.24
NUP98-205ENST00000397007 CCDC191Q8NCU4 936 aa13.58□□□□□ -0.24
NUP98-205ENST00000397007 DNAAF4Q8WXU2 420 aa13.58□□□□□ -0.24
NUP98-205ENST00000397007 CCDC88AQ3V6T2 1871 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 202.7 ms