RNA–Protein interactions for RNA: ENST00000395489.6

A1CF-206, Transcript of APOBEC1 complementation factor, humanhuman

TSL 2 BASIC

Gene A1CF, Length 9,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-206ENST00000395489 TSC1Q92574 1164 aa7.48□□□□□ -1.21
A1CF-206ENST00000395489 SUFUQ9UMX1 484 aa7.48□□□□□ -1.21
A1CF-206ENST00000395489 SIN3AQ96ST3 1273 aa7.48□□□□□ -1.21
A1CF-206ENST00000395489 EFCAB8A8MWE9 144 aa7.48□□□□□ -1.21
A1CF-206ENST00000395489 TRIM7Q9C029 511 aa7.48□□□□□ -1.21
A1CF-206ENST00000395489 MAFGO15525 162 aa7.47□□□□□ -1.21
A1CF-206ENST00000395489 BLVRAP53004 296 aa7.47□□□□□ -1.21
A1CF-206ENST00000395489 MX1P20591 662 aa7.47□□□□□ -1.21
A1CF-206ENST00000395489 ICA1Q05084 483 aa7.47□□□□□ -1.21
A1CF-206ENST00000395489 BCL2L12Q9HB09 334 aa7.47□□□□□ -1.21
A1CF-206ENST00000395489 SAMD15Q9P1V8 674 aa7.47□□□□□ -1.21
A1CF-206ENST00000395489 RAB3IPQ96QF0 476 aaPredicted RBP7.47□□□□□ -1.21
A1CF-206ENST00000395489 KIF2CQ99661 725 aa7.47□□□□□ -1.21
A1CF-206ENST00000395489 CCDC6Q16204 474 aa7.47□□□□□ -1.21
A1CF-206ENST00000395489 TADA2BQ86TJ2 420 aa7.47□□□□□ -1.21
A1CF-206ENST00000395489 MSL3Q8N5Y2 521 aaKnown RBP7.47□□□□□ -1.21
A1CF-206ENST00000395489 DDX41Q9UJV9 622 aaKnown RBP7.47□□□□□ -1.21
A1CF-206ENST00000395489 ANKRD30BQ9BXX2 1392 aa7.47□□□□□ -1.21
A1CF-206ENST00000395489 CTAGE15A4D2H0 777 aa7.47□□□□□ -1.21
A1CF-206ENST00000395489 CTAGE8P0CG41 777 aa7.47□□□□□ -1.21
A1CF-206ENST00000395489 CTAGE6Q86UF2 777 aa7.47□□□□□ -1.21
A1CF-206ENST00000395489 CTAGE4Q8IX94 777 aa7.47□□□□□ -1.21
A1CF-206ENST00000395489 PLCB4Q15147 1175 aa7.47□□□□□ -1.21
A1CF-206ENST00000395489 ATL3Q6DD88 541 aa7.47□□□□□ -1.21
A1CF-206ENST00000395489 RCSD1Q6JBY9 416 aa7.47□□□□□ -1.21
A1CF-206ENST00000395489 CCDC80Q76M96 950 aa7.47□□□□□ -1.21
A1CF-206ENST00000395489 NOL3O60936 208 aaKnown RBP7.47□□□□□ -1.21
A1CF-206ENST00000395489 PDE6BP35913 854 aa7.47□□□□□ -1.21
A1CF-206ENST00000395489 BIRC2Q13490 618 aa7.47□□□□□ -1.21
A1CF-206ENST00000395489 CCDC110Q8TBZ0 833 aa7.47□□□□□ -1.21
A1CF-206ENST00000395489 SREK1Q8WXA9 508 aaKnown RBP7.47□□□□□ -1.21
A1CF-206ENST00000395489 STIM1Q13586 685 aa7.47□□□□□ -1.21
A1CF-206ENST00000395489 CCDC68Q9H2F9 335 aa7.47□□□□□ -1.21
A1CF-206ENST00000395489 MAP3K5Q99683 1374 aa7.46□□□□□ -1.21
A1CF-206ENST00000395489 PFDN1O60925 122 aa7.46□□□□□ -1.21
A1CF-206ENST00000395489 GCFC2P16383 781 aaKnown RBP7.46□□□□□ -1.21
A1CF-206ENST00000395489 RUBCNQ92622 972 aa7.46□□□□□ -1.21
A1CF-206ENST00000395489 ALDH3A1P30838 453 aa7.46□□□□□ -1.21
A1CF-206ENST00000395489 CC2D2BQ6DHV5 1058 aa7.46□□□□□ -1.21
A1CF-206ENST00000395489 HOOK3Q86VS8 718 aa7.46□□□□□ -1.21
A1CF-206ENST00000395489 PYM1Q9BRP8 204 aaKnown RBP7.46□□□□□ -1.21
A1CF-206ENST00000395489 GNL3LQ9NVN8 582 aaKnown RBP7.46□□□□□ -1.21
A1CF-206ENST00000395489 ZNF777Q9ULD5 760 aaPredicted RBP7.46□□□□□ -1.21
A1CF-206ENST00000395489 NCOA1Q15788 1441 aa7.46□□□□□ -1.21
A1CF-206ENST00000395489 SERPINC1P01008 464 aa7.46□□□□□ -1.22
A1CF-206ENST00000395489 TAF7Q15545 349 aaPredicted RBP7.46□□□□□ -1.22
A1CF-206ENST00000395489 CTAGE1Q96RT6 745 aa7.46□□□□□ -1.22
A1CF-206ENST00000395489 KIAA1107Q9UPP5 1409 aa7.46□□□□□ -1.22
A1CF-206ENST00000395489 MAP7D1Q3KQU3 841 aa7.46□□□□□ -1.22
A1CF-206ENST00000395489 SMARCC2Q8TAQ2 1214 aa7.46□□□□□ -1.22
A1CF-206ENST00000395489 KCNH8Q96L42 1107 aa7.46□□□□□ -1.22
A1CF-206ENST00000395489 FAN1Q9Y2M0 1017 aa7.46□□□□□ -1.22
A1CF-206ENST00000395489 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.46□□□□□ -1.22
A1CF-206ENST00000395489 RAD51AP2Q09MP3 1159 aa7.46□□□□□ -1.22
A1CF-206ENST00000395489 JAKMIP2Q96AA8 810 aa7.46□□□□□ -1.22
A1CF-206ENST00000395489 IQCDQ96DY2 449 aa7.46□□□□□ -1.22
A1CF-206ENST00000395489 SCLT1Q96NL6 688 aa7.46□□□□□ -1.22
A1CF-206ENST00000395489 GBP5Q96PP8 586 aa7.46□□□□□ -1.22
A1CF-206ENST00000395489 VAV2P52735 878 aa7.46□□□□□ -1.22
A1CF-206ENST00000395489 PSD3Q9NYI0 1048 aa7.46□□□□□ -1.22
A1CF-206ENST00000395489 TIAM1Q13009 1591 aa7.46□□□□□ -1.22
A1CF-206ENST00000395489 STMN1P16949 149 aa7.46□□□□□ -1.22
A1CF-206ENST00000395489 ZSCAN20P17040 1043 aaPredicted RBP7.46□□□□□ -1.22
A1CF-206ENST00000395489 ABCA5Q8WWZ7 1642 aa7.46□□□□□ -1.22
A1CF-206ENST00000395489 GMNNO75496 209 aa7.45□□□□□ -1.22
A1CF-206ENST00000395489 RPGRIP1LQ68CZ1 1315 aa7.45□□□□□ -1.22
A1CF-206ENST00000395489 STAMBPO95630 424 aa7.45□□□□□ -1.22
A1CF-206ENST00000395489 NUB1Q9Y5A7 615 aa7.45□□□□□ -1.22
A1CF-206ENST00000395489 NDUFAB1O14561 156 aa7.45□□□□□ -1.22
A1CF-206ENST00000395489 PNISRQ8TF01 805 aaKnown RBP7.45□□□□□ -1.22
A1CF-206ENST00000395489 MORC2Q9Y6X9 1032 aaPredicted RBP7.45□□□□□ -1.22
A1CF-206ENST00000395489 ATP5DP30049 168 aa7.45□□□□□ -1.22
A1CF-206ENST00000395489 BRPF1P55201 1214 aaPredicted RBP7.45□□□□□ -1.22
A1CF-206ENST00000395489 CCDC151A5D8V7 595 aa7.45□□□□□ -1.22
A1CF-206ENST00000395489 DEUP1Q05D60 604 aa7.45□□□□□ -1.22
A1CF-206ENST00000395489 TRIM29Q14134 588 aa7.45□□□□□ -1.22
A1CF-206ENST00000395489 ABCF2Q9UG63 623 aa7.45□□□□□ -1.22
A1CF-206ENST00000395489 CCT6AP40227 531 aaKnown RBP7.45□□□□□ -1.22
A1CF-206ENST00000395489 PANK2Q9BZ23 570 aa7.45□□□□□ -1.22
A1CF-206ENST00000395489 EIF2S1P05198 315 aaKnown RBP7.45□□□□□ -1.22
A1CF-206ENST00000395489 SLC8A3P57103 927 aa7.45□□□□□ -1.22
A1CF-206ENST00000395489 PAFAH1B1P43034 410 aa7.45□□□□□ -1.22
A1CF-206ENST00000395489 DCAF11Q8TEB1 546 aa7.45□□□□□ -1.22
A1CF-206ENST00000395489 RABGGTAQ92696 567 aa7.45□□□□□ -1.22
A1CF-206ENST00000395489 SAFBQ15424 915 aaKnown RBP eCLIP7.44□□□□□ -1.22
A1CF-206ENST00000395489 VPS18Q9P253 973 aa7.44□□□□□ -1.22
A1CF-206ENST00000395489 FHOD3Q2V2M9 1422 aa7.44□□□□□ -1.22
A1CF-206ENST00000395489 MAP3K21Q5TCX8 1036 aa7.44□□□□□ -1.22
A1CF-206ENST00000395489 POLE3Q9NRF9 147 aa7.44□□□□□ -1.22
A1CF-206ENST00000395489 SGSM2O43147 1006 aa7.44□□□□□ -1.22
A1CF-206ENST00000395489 ANKRD45Q5TZF3 282 aa7.44□□□□□ -1.22
A1CF-206ENST00000395489 RASEFQ8IZ41 740 aa7.44□□□□□ -1.22
A1CF-206ENST00000395489 N4BP2L2Q92802 583 aaPredicted RBP7.44□□□□□ -1.22
A1CF-206ENST00000395489 SPATA32Q96LK8 384 aa7.44□□□□□ -1.22
A1CF-206ENST00000395489 CENPKQ9BS16 269 aa7.44□□□□□ -1.22
A1CF-206ENST00000395489 EIF2AK4Q9P2K8 1649 aaKnown RBP7.44□□□□□ -1.22
A1CF-206ENST00000395489 PCK1P35558 622 aa7.44□□□□□ -1.22
A1CF-206ENST00000395489 Q9H521 79 aa7.44□□□□□ -1.22
A1CF-206ENST00000395489 SAFB2Q14151 953 aaKnown RBP eCLIP7.44□□□□□ -1.22
A1CF-206ENST00000395489 GOLGA6CA6NDK9 693 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms