RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 PDRG1Q9NUG6 133 aa17.1■□□□□ 0.33
CLIP2-203ENST00000395060 NRXN3Q9Y4C0 1643 aa17.1■□□□□ 0.33
CLIP2-203ENST00000395060 GOLGA6L4A6NEF3 574 aa17.1■□□□□ 0.33
CLIP2-203ENST00000395060 ADAMTS13Q76LX8 1427 aa17.09■□□□□ 0.33
CLIP2-203ENST00000395060 CCDC30Q5VVM6 783 aa17.09■□□□□ 0.33
CLIP2-203ENST00000395060 TRIM5Q9C035 493 aa17.09■□□□□ 0.33
CLIP2-203ENST00000395060 MTMR6Q9Y217 621 aa17.09■□□□□ 0.33
CLIP2-203ENST00000395060 RAD50Q92878 1312 aa17.09■□□□□ 0.33
CLIP2-203ENST00000395060 REREQ9P2R6 1566 aa17.09■□□□□ 0.33
CLIP2-203ENST00000395060 LSG1Q9H089 658 aaKnown RBP17.09■□□□□ 0.33
CLIP2-203ENST00000395060 PA2G4Q9UQ80 394 aaKnown RBP17.09■□□□□ 0.33
CLIP2-203ENST00000395060 ANKRD26Q9UPS8 1709 aa17.09■□□□□ 0.33
CLIP2-203ENST00000395060 KIAA0232Q92628 1395 aa17.09■□□□□ 0.33
CLIP2-203ENST00000395060 HDGFL1Q5TGJ6 251 aa17.08■□□□□ 0.33
CLIP2-203ENST00000395060 LARP1BQ659C4 914 aaKnown RBP17.08■□□□□ 0.33
CLIP2-203ENST00000395060 CDC37L1Q7L3B6 337 aa17.08■□□□□ 0.33
CLIP2-203ENST00000395060 CDC42BPGQ6DT37 1551 aa17.08■□□□□ 0.33
CLIP2-203ENST00000395060 TTC6Q86TZ1 520 aa17.08■□□□□ 0.32
CLIP2-203ENST00000395060 TTC14Q96N46 770 aa17.08■□□□□ 0.32
CLIP2-203ENST00000395060 TAOK2Q9UL54 1235 aa17.08■□□□□ 0.32
CLIP2-203ENST00000395060 CCDC192P0DO97 292 aa17.07■□□□□ 0.32
CLIP2-203ENST00000395060 ME3Q16798 604 aa17.07■□□□□ 0.32
CLIP2-203ENST00000395060 CNTROBQ8N137 903 aa17.07■□□□□ 0.32
CLIP2-203ENST00000395060 PI4K2BQ8TCG2 481 aa17.07■□□□□ 0.32
CLIP2-203ENST00000395060 DACT1Q9NYF0 836 aa17.07■□□□□ 0.32
CLIP2-203ENST00000395060 ANO6Q4KMQ2 910 aa17.07■□□□□ 0.32
CLIP2-203ENST00000395060 DDX11Q96FC9 970 aa17.07■□□□□ 0.32
CLIP2-203ENST00000395060 EYA1Q99502 592 aa17.07■□□□□ 0.32
CLIP2-203ENST00000395060 HYPKQ9NX55 129 aa17.07■□□□□ 0.32
CLIP2-203ENST00000395060 NLRP6P59044 892 aa17.06■□□□□ 0.32
CLIP2-203ENST00000395060 CRB1P82279 1406 aa17.06■□□□□ 0.32
CLIP2-203ENST00000395060 TAF7Q15545 349 aaPredicted RBP17.06■□□□□ 0.32
CLIP2-203ENST00000395060 SPTLC3Q9NUV7 552 aa17.06■□□□□ 0.32
CLIP2-203ENST00000395060 CCDC9Q9Y3X0 531 aaKnown RBP17.06■□□□□ 0.32
CLIP2-203ENST00000395060 SIRT1Q96EB6 747 aa17.06■□□□□ 0.32
CLIP2-203ENST00000395060 STAP2Q9UGK3 403 aa17.06■□□□□ 0.32
CLIP2-203ENST00000395060 ATP6V1DQ9Y5K8 247 aa17.06■□□□□ 0.32
CLIP2-203ENST00000395060 KIF13AQ9H1H9 1805 aa17.06■□□□□ 0.32
CLIP2-203ENST00000395060 SETD1AO15047 1707 aaKnown RBP17.06■□□□□ 0.32
CLIP2-203ENST00000395060 PTPRUQ92729 1446 aa17.06■□□□□ 0.32
CLIP2-203ENST00000395060 TYRO3Q06418 890 aa17.05■□□□□ 0.32
CLIP2-203ENST00000395060 ZNF771Q7L3S4 317 aaPredicted RBP17.05■□□□□ 0.32
CLIP2-203ENST00000395060 FUCA2Q9BTY2 467 aa17.05■□□□□ 0.32
CLIP2-203ENST00000395060 NUP62CLQ9H1M0 184 aa17.05■□□□□ 0.32
CLIP2-203ENST00000395060 LETM1O95202 739 aaPredicted RBP17.05■□□□□ 0.32
CLIP2-203ENST00000395060 ARID5BQ14865 1188 aa17.05■□□□□ 0.32
CLIP2-203ENST00000395060 TNMDQ9H2S6 317 aa17.05■□□□□ 0.32
CLIP2-203ENST00000395060 TAF6LQ9Y6J9 622 aa17.05■□□□□ 0.32
CLIP2-203ENST00000395060 AATKQ6ZMQ8 1374 aa17.05■□□□□ 0.32
CLIP2-203ENST00000395060 SYTL4Q96C24 671 aaPredicted RBP17.05■□□□□ 0.32
CLIP2-203ENST00000395060 FAM227BQ96M60 508 aa17.05■□□□□ 0.32
CLIP2-203ENST00000395060 DNAJC25Q9H1X3 360 aa17.05■□□□□ 0.32
CLIP2-203ENST00000395060 KCNA6P17658 529 aa17.04■□□□□ 0.32
CLIP2-203ENST00000395060 ST3GAL1Q11201 340 aa17.04■□□□□ 0.32
CLIP2-203ENST00000395060 MAP3K11Q16584 847 aa17.04■□□□□ 0.32
CLIP2-203ENST00000395060 BICD2Q8TD16 824 aa17.04■□□□□ 0.32
CLIP2-203ENST00000395060 CYP46A1Q9Y6A2 500 aa17.04■□□□□ 0.32
CLIP2-203ENST00000395060 PLEKHG3A1L390 1219 aa17.04■□□□□ 0.32
CLIP2-203ENST00000395060 GOLGA6L6A8MZA4 724 aa17.04■□□□□ 0.32
CLIP2-203ENST00000395060 RAB11FIP3O75154 756 aa17.04■□□□□ 0.32
CLIP2-203ENST00000395060 ERCC4Q92889 916 aaPredicted RBP17.04■□□□□ 0.32
CLIP2-203ENST00000395060 TPCN1Q9ULQ1 816 aa17.04■□□□□ 0.32
CLIP2-203ENST00000395060 PI4KAP2A4QPH2 592 aa17.03■□□□□ 0.32
CLIP2-203ENST00000395060 TNNT1P13805 278 aa17.03■□□□□ 0.32
CLIP2-203ENST00000395060 PI4KAP1Q8N8J0 262 aa17.03■□□□□ 0.32
CLIP2-203ENST00000395060 SIL1Q9H173 461 aa17.03■□□□□ 0.32
CLIP2-203ENST00000395060 MRVI1Q9Y6F6 885 aa17.03■□□□□ 0.32
CLIP2-203ENST00000395060 TPD52L1Q16890 204 aaPredicted RBP17.03■□□□□ 0.32
CLIP2-203ENST00000395060 TMEM87AQ8NBN3 555 aa17.03■□□□□ 0.32
CLIP2-203ENST00000395060 CBX8Q9HC52 389 aa17.03■□□□□ 0.32
CLIP2-203ENST00000395060 TRMT1Q9NXH9 659 aaKnown RBP17.03■□□□□ 0.32
CLIP2-203ENST00000395060 GTF2F1P35269 517 aaKnown RBP eCLIP17.02■□□□□ 0.32
CLIP2-203ENST00000395060 THEMISQ8N1K5 641 aaPredicted RBP17.02■□□□□ 0.32
CLIP2-203ENST00000395060 IL17REQ8NFR9 667 aa17.02■□□□□ 0.32
CLIP2-203ENST00000395060 CCDC8Q9H0W5 538 aaPredicted RBP17.02■□□□□ 0.32
CLIP2-203ENST00000395060 KRT85P78386 507 aa17.01■□□□□ 0.31
CLIP2-203ENST00000395060 NCBP1Q09161 790 aaKnown RBP17.01■□□□□ 0.31
CLIP2-203ENST00000395060 MAPK8IP2Q13387 824 aaPredicted RBP17.01■□□□□ 0.31
CLIP2-203ENST00000395060 FAM200AQ8TCP9 573 aa17.01■□□□□ 0.31
CLIP2-203ENST00000395060 KIF1BPQ96EK5 621 aa17.01■□□□□ 0.31
CLIP2-203ENST00000395060 CHPF2Q9P2E5 772 aa17.01■□□□□ 0.31
CLIP2-203ENST00000395060 NDUFB9Q9Y6M9 179 aa17.01■□□□□ 0.31
CLIP2-203ENST00000395060 PLEKHG1Q9ULL1 1385 aa17.01■□□□□ 0.31
CLIP2-203ENST00000395060 KCNQ3O43525 872 aa17.01■□□□□ 0.31
CLIP2-203ENST00000395060 SPATA32Q96LK8 384 aa17.01■□□□□ 0.31
CLIP2-203ENST00000395060 TECPR2O15040 1411 aa17.01■□□□□ 0.31
CLIP2-203ENST00000395060 LARP1Q6PKG0 1096 aaKnown RBP17.01■□□□□ 0.31
CLIP2-203ENST00000395060 FILIP1Q7Z7B0 1213 aa17.01■□□□□ 0.31
CLIP2-203ENST00000395060 SSH3Q8TE77 659 aa17.01■□□□□ 0.31
CLIP2-203ENST00000395060 LRRC2Q9BYS8 371 aa17.01■□□□□ 0.31
CLIP2-203ENST00000395060 NR1I2O75469 434 aa17■□□□□ 0.31
CLIP2-203ENST00000395060 EDC3Q96F86 508 aaKnown RBP17■□□□□ 0.31
CLIP2-203ENST00000395060 CGNQ9P2M7 1197 aaKnown RBP17■□□□□ 0.31
CLIP2-203ENST00000395060 NAP1L2Q9ULW6 460 aaPredicted RBP17■□□□□ 0.31
CLIP2-203ENST00000395060 RBM8AQ9Y5S9 174 aaKnown RBP17■□□□□ 0.31
CLIP2-203ENST00000395060 RIMS1Q86UR5 1692 aaKnown RBP17■□□□□ 0.31
CLIP2-203ENST00000395060 GNAT3A8MTJ3 354 aa17■□□□□ 0.31
CLIP2-203ENST00000395060 IFIT2P09913 472 aaKnown RBP17■□□□□ 0.31
CLIP2-203ENST00000395060 ABTB2Q8N961 1025 aa17■□□□□ 0.31
CLIP2-203ENST00000395060 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms