RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 CABLES1Q8TDN4 633 aa18.81■□□□□ 0.6
CPSF7-202ENST00000394888 JCADQ9P266 1359 aa18.81■□□□□ 0.6
CPSF7-202ENST00000394888 NHSL1Q5SYE7 1610 aa18.81■□□□□ 0.6
CPSF7-202ENST00000394888 DDX60Q8IY21 1712 aaKnown RBP18.8■□□□□ 0.6
CPSF7-202ENST00000394888 EIF5BO60841 1220 aaKnown RBP18.8■□□□□ 0.6
CPSF7-202ENST00000394888 C1orf141Q5JVX7 400 aa18.8■□□□□ 0.6
CPSF7-202ENST00000394888 KCNB2Q92953 911 aa18.8■□□□□ 0.6
CPSF7-202ENST00000394888 GBP4Q96PP9 640 aa18.8■□□□□ 0.6
CPSF7-202ENST00000394888 GRPEL1Q9HAV7 217 aa18.8■□□□□ 0.6
CPSF7-202ENST00000394888 KLHL40Q2TBA0 621 aa18.8■□□□□ 0.6
CPSF7-202ENST00000394888 NEK4P51957 841 aa18.8■□□□□ 0.6
CPSF7-202ENST00000394888 BICC1Q9H694 974 aaKnown RBP18.8■□□□□ 0.6
CPSF7-202ENST00000394888 L1TD1Q5T7N2 865 aaKnown RBP18.79■□□□□ 0.6
CPSF7-202ENST00000394888 TLR7Q9NYK1 1049 aaKnown RBP18.79■□□□□ 0.6
CPSF7-202ENST00000394888 SNX14Q9Y5W7 946 aa18.79■□□□□ 0.6
CPSF7-202ENST00000394888 FAM43AQ8N2R8 423 aa18.79■□□□□ 0.6
CPSF7-202ENST00000394888 CWC22Q9HCG8 908 aaKnown RBP18.79■□□□□ 0.6
CPSF7-202ENST00000394888 SPATA31A3Q5VYP0 1347 aa18.79■□□□□ 0.6
CPSF7-202ENST00000394888 ITGB4P16144 1822 aa18.79■□□□□ 0.6
CPSF7-202ENST00000394888 BRD1O95696 1058 aa18.79■□□□□ 0.6
CPSF7-202ENST00000394888 NFATC2IPQ8NCF5 419 aa18.79■□□□□ 0.6
CPSF7-202ENST00000394888 SNRKQ9NRH2 765 aa18.79■□□□□ 0.6
CPSF7-202ENST00000394888 COL15A1P39059 1388 aa18.78■□□□□ 0.6
CPSF7-202ENST00000394888 ST18O60284 1047 aa18.78■□□□□ 0.6
CPSF7-202ENST00000394888 ST3GAL1Q11201 340 aa18.78■□□□□ 0.6
CPSF7-202ENST00000394888 ZNF496Q96IT1 587 aaPredicted RBP18.78■□□□□ 0.6
CPSF7-202ENST00000394888 HYPKQ9NX55 129 aa18.78■□□□□ 0.6
CPSF7-202ENST00000394888 ERBB4Q15303 1308 aa18.78■□□□□ 0.6
CPSF7-202ENST00000394888 TTC41PQ6P2S7 1318 aa18.78■□□□□ 0.6
CPSF7-202ENST00000394888 TRIM6-TRIM34B2RNG4 842 aa18.78■□□□□ 0.6
CPSF7-202ENST00000394888 RFX5P48382 616 aaPredicted RBP18.78■□□□□ 0.6
CPSF7-202ENST00000394888 CASP7P55210 303 aa18.78■□□□□ 0.6
CPSF7-202ENST00000394888 LINS1Q8NG48 757 aa18.78■□□□□ 0.6
CPSF7-202ENST00000394888 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.78■□□□□ 0.63e-9■■□□□ 13.7
CPSF7-202ENST00000394888 GRM8O00222 908 aa18.77■□□□□ 0.6
CPSF7-202ENST00000394888 ANO2Q9NQ90 1003 aa18.77■□□□□ 0.6
CPSF7-202ENST00000394888 NEURL1BA8MQ27 555 aa18.77■□□□□ 0.6
CPSF7-202ENST00000394888 PTH1RQ03431 593 aa18.77■□□□□ 0.6
CPSF7-202ENST00000394888 EAF2Q96CJ1 260 aaPredicted RBP18.77■□□□□ 0.59
CPSF7-202ENST00000394888 USP16Q9Y5T5 823 aa18.77■□□□□ 0.59
CPSF7-202ENST00000394888 WNK3Q9BYP7 1800 aa18.77■□□□□ 0.59
CPSF7-202ENST00000394888 COL5A2P05997 1499 aaPredicted RBP18.76■□□□□ 0.59
CPSF7-202ENST00000394888 UPF3BQ9BZI7 483 aaKnown RBP18.76■□□□□ 0.59
CPSF7-202ENST00000394888 MRE11P49959 708 aa18.76■□□□□ 0.59
CPSF7-202ENST00000394888 TNS2Q63HR2 1409 aa18.75■□□□□ 0.59
CPSF7-202ENST00000394888 NUCB2P80303 420 aa18.75■□□□□ 0.59
CPSF7-202ENST00000394888 LMOD2Q6P5Q4 547 aa18.75■□□□□ 0.59
CPSF7-202ENST00000394888 INTS4Q96HW7 963 aaKnown RBP18.75■□□□□ 0.59
CPSF7-202ENST00000394888 MYH15Q9Y2K3 1946 aa18.74■□□□□ 0.59
CPSF7-202ENST00000394888 CHRNA2Q15822 529 aa18.74■□□□□ 0.59
CPSF7-202ENST00000394888 SKOR2Q2VWA4 1001 aaPredicted RBP18.74■□□□□ 0.59
CPSF7-202ENST00000394888 MCTP1Q6DN14 999 aa18.74■□□□□ 0.59
CPSF7-202ENST00000394888 RUFY3Q7L099 469 aa18.74■□□□□ 0.59
CPSF7-202ENST00000394888 KLHDC4Q8TBB5 520 aa18.74■□□□□ 0.59
CPSF7-202ENST00000394888 LARGE1O95461 756 aa18.74■□□□□ 0.59
CPSF7-202ENST00000394888 ZNF445P59923 1031 aa18.74■□□□□ 0.59
CPSF7-202ENST00000394888 NWD2Q9ULI1 1742 aa18.74■□□□□ 0.59
CPSF7-202ENST00000394888 PIP4K2AP48426 406 aaPredicted RBP18.73■□□□□ 0.59
CPSF7-202ENST00000394888 HSP90AA1P07900 732 aaKnown RBP18.73■□□□□ 0.59
CPSF7-202ENST00000394888 GCKRQ14397 625 aa18.73■□□□□ 0.59
CPSF7-202ENST00000394888 ARXQ96QS3 562 aa18.73■□□□□ 0.59
CPSF7-202ENST00000394888 ISY1Q9ULR0 285 aaKnown RBP18.73■□□□□ 0.59
CPSF7-202ENST00000394888 ADCK5Q3MIX3 580 aa18.73■□□□□ 0.59
CPSF7-202ENST00000394888 TAF6LQ9Y6J9 622 aa18.72■□□□□ 0.59
CPSF7-202ENST00000394888 MED23Q9ULK4 1368 aa18.72■□□□□ 0.59
CPSF7-202ENST00000394888 XAGE3Q8WTP9 111 aa18.72■□□□□ 0.59
CPSF7-202ENST00000394888 SPG7Q9UQ90 795 aa18.72■□□□□ 0.59
CPSF7-202ENST00000394888 NECTIN1Q15223 517 aa18.71■□□□□ 0.59
CPSF7-202ENST00000394888 RABL6Q3YEC7 729 aaPredicted RBP18.71■□□□□ 0.59
CPSF7-202ENST00000394888 METTL22Q9BUU2 404 aaPredicted RBP18.71■□□□□ 0.59
CPSF7-202ENST00000394888 NBPF26B4DH59 902 aa18.71■□□□□ 0.59
CPSF7-202ENST00000394888 CPA1P15085 419 aa18.71■□□□□ 0.59
CPSF7-202ENST00000394888 ZSCAN23Q3MJ62 389 aa18.71■□□□□ 0.59
CPSF7-202ENST00000394888 NBPF14Q5TI25 921 aa18.71■□□□□ 0.59
CPSF7-202ENST00000394888 NBPF10Q6P3W6 841 aaKnown RBP18.71■□□□□ 0.59
CPSF7-202ENST00000394888 NBPF15Q8N660 670 aa18.71■□□□□ 0.59
CPSF7-202ENST00000394888 TMEM63CQ9P1W3 806 aa18.71■□□□□ 0.59
CPSF7-202ENST00000394888 ANKRD36CQ5JPF3 1778 aa18.7■□□□□ 0.58
CPSF7-202ENST00000394888 CWC27Q6UX04 472 aaKnown RBP18.7■□□□□ 0.58
CPSF7-202ENST00000394888 BRINP3Q76B58 766 aa18.7■□□□□ 0.58
CPSF7-202ENST00000394888 COPS6Q7L5N1 327 aa18.7■□□□□ 0.58
CPSF7-202ENST00000394888 ECHDC1Q9NTX5 307 aa18.7■□□□□ 0.58
CPSF7-202ENST00000394888 AIMP1Q12904 312 aaKnown RBP18.7■□□□□ 0.58
CPSF7-202ENST00000394888 RBM27Q9P2N5 1060 aaKnown RBP18.7■□□□□ 0.58
CPSF7-202ENST00000394888 GLRX3O76003 335 aaKnown RBP18.69■□□□□ 0.58
CPSF7-202ENST00000394888 NLRP2Q9NX02 1062 aa18.69■□□□□ 0.58
CPSF7-202ENST00000394888 PLCH1Q4KWH8 1693 aa18.69■□□□□ 0.58
CPSF7-202ENST00000394888 MCM2P49736 904 aa18.69■□□□□ 0.58
CPSF7-202ENST00000394888 AK2P54819 239 aa18.69■□□□□ 0.58
CPSF7-202ENST00000394888 MYL6BP14649 208 aa18.69■□□□□ 0.58
CPSF7-202ENST00000394888 CNTROBQ8N137 903 aa18.69■□□□□ 0.58
CPSF7-202ENST00000394888 DCAF5Q96JK2 942 aa18.69■□□□□ 0.58
CPSF7-202ENST00000394888 FAM227BQ96M60 508 aa18.69■□□□□ 0.58
CPSF7-202ENST00000394888 CHGBP05060 677 aa18.68■□□□□ 0.58
CPSF7-202ENST00000394888 PTPN12Q05209 780 aaKnown RBP18.68■□□□□ 0.58
CPSF7-202ENST00000394888 IFNL2Q8IZJ0 200 aa18.68■□□□□ 0.58
CPSF7-202ENST00000394888 C9orf78Q9NZ63 289 aaPredicted RBP18.68■□□□□ 0.58
CPSF7-202ENST00000394888 PTMSP20962 102 aa18.68■□□□□ 0.58
CPSF7-202ENST00000394888 HSP90AB4PQ58FF6 505 aa18.68■□□□□ 0.58
CPSF7-202ENST00000394888 CHMP4AQ9BY43 222 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms