RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 CABLES1Q8TDN4 633 aa15.79■□□□□ 0.12
NFKB1-202ENST00000394820 PDCL2Q8N4E4 241 aa15.78■□□□□ 0.12
NFKB1-202ENST00000394820 KIF20BQ96Q89 1820 aa15.78■□□□□ 0.12
NFKB1-202ENST00000394820 CDC42BPGQ6DT37 1551 aa15.78■□□□□ 0.12
NFKB1-202ENST00000394820 FSD1Q9BTV5 496 aa15.78■□□□□ 0.12
NFKB1-202ENST00000394820 CCDC8Q9H0W5 538 aaPredicted RBP15.78■□□□□ 0.12
NFKB1-202ENST00000394820 PRAMEF22A3QJZ6 481 aa15.77■□□□□ 0.12
NFKB1-202ENST00000394820 NBPF7P0C2Y1 421 aaPredicted RBP15.77■□□□□ 0.11
NFKB1-202ENST00000394820 NOL7Q9UMY1 257 aaKnown RBP15.77■□□□□ 0.11
NFKB1-202ENST00000394820 CLASRPQ8N2M8 674 aaKnown RBP15.76■□□□□ 0.11
NFKB1-202ENST00000394820 SYTL4Q96C24 671 aaPredicted RBP15.76■□□□□ 0.11
NFKB1-202ENST00000394820 MAP7D2Q96T17 732 aa15.76■□□□□ 0.11
NFKB1-202ENST00000394820 DNAJC2Q99543 621 aaKnown RBP15.76■□□□□ 0.11
NFKB1-202ENST00000394820 ESYT1Q9BSJ8 1104 aa15.76■□□□□ 0.11
NFKB1-202ENST00000394820 LRRC2Q9BYS8 371 aa15.76■□□□□ 0.11
NFKB1-202ENST00000394820 IGSF1Q8N6C5 1336 aa15.76■□□□□ 0.11
NFKB1-202ENST00000394820 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.76■□□□□ 0.11
NFKB1-202ENST00000394820 CHRNA2Q15822 529 aa15.76■□□□□ 0.11
NFKB1-202ENST00000394820 PLEKHO1Q53GL0 409 aaPredicted RBP15.76■□□□□ 0.11
NFKB1-202ENST00000394820 CNTROBQ8N137 903 aa15.76■□□□□ 0.11
NFKB1-202ENST00000394820 TNMDQ9H2S6 317 aa15.76■□□□□ 0.11
NFKB1-202ENST00000394820 BOLA2Q9H3K6 86 aa15.76■□□□□ 0.11
NFKB1-202ENST00000394820 UNC5CLQ8IV45 518 aa15.75■□□□□ 0.11
NFKB1-202ENST00000394820 PDRG1Q9NUG6 133 aa15.75■□□□□ 0.11
NFKB1-202ENST00000394820 PA2G4Q9UQ80 394 aaKnown RBP15.75■□□□□ 0.11
NFKB1-202ENST00000394820 OVOS2A0A0J9YW53 1432 aa15.75■□□□□ 0.11
NFKB1-202ENST00000394820 GJB2P29033 226 aa15.75■□□□□ 0.11
NFKB1-202ENST00000394820 CWF19L2Q2TBE0 894 aaKnown RBP15.75■□□□□ 0.11
NFKB1-202ENST00000394820 OVOS2Q6IE36 1432 aa15.75■□□□□ 0.11
NFKB1-202ENST00000394820 MAP3K5Q99683 1374 aa15.75■□□□□ 0.11
NFKB1-202ENST00000394820 STX6O43752 255 aa15.74■□□□□ 0.11
NFKB1-202ENST00000394820 GCP02774 474 aa15.74■□□□□ 0.11
NFKB1-202ENST00000394820 GNL2Q13823 731 aaKnown RBP15.74■□□□□ 0.11
NFKB1-202ENST00000394820 HOMER1Q86YM7 354 aa15.74■□□□□ 0.11
NFKB1-202ENST00000394820 ANKRD24Q8TF21 1146 aa15.74■□□□□ 0.11
NFKB1-202ENST00000394820 USP44Q9H0E7 712 aa15.74■□□□□ 0.11
NFKB1-202ENST00000394820 GPATCH3Q96I76 525 aa15.74■□□□□ 0.11
NFKB1-202ENST00000394820 NEUROD6Q96NK8 337 aa15.74■□□□□ 0.11
NFKB1-202ENST00000394820 ARHGEF10O15013 1369 aa15.74■□□□□ 0.11
NFKB1-202ENST00000394820 KIAA0232Q92628 1395 aa15.74■□□□□ 0.11
NFKB1-202ENST00000394820 ATP8B2P98198 1209 aa15.74■□□□□ 0.11
NFKB1-202ENST00000394820 SKIDA1Q1XH10 827 aa15.74■□□□□ 0.11
NFKB1-202ENST00000394820 ISM2Q6H9L7 571 aa15.74■□□□□ 0.11
NFKB1-202ENST00000394820 AACSQ86V21 672 aa15.74■□□□□ 0.11
NFKB1-202ENST00000394820 RAB11FIP4Q86YS3 637 aa15.73■□□□□ 0.11
NFKB1-202ENST00000394820 DNAAF4Q8WXU2 420 aa15.73■□□□□ 0.11
NFKB1-202ENST00000394820 CYP46A1Q9Y6A2 500 aa15.73■□□□□ 0.11
NFKB1-202ENST00000394820 CCDC192P0DO97 292 aa15.73■□□□□ 0.11
NFKB1-202ENST00000394820 MCM2P49736 904 aa15.73■□□□□ 0.11
NFKB1-202ENST00000394820 TMX1Q9H3N1 280 aa15.73■□□□□ 0.11
NFKB1-202ENST00000394820 CRB1P82279 1406 aa15.73■□□□□ 0.11
NFKB1-202ENST00000394820 G3BP1Q13283 466 aaKnown RBP eCLIP15.73■□□□□ 0.11
NFKB1-202ENST00000394820 LUZP1Q86V48 1076 aa15.73■□□□□ 0.11
NFKB1-202ENST00000394820 SDF4Q9BRK5 362 aa15.73■□□□□ 0.11
NFKB1-202ENST00000394820 CCDC183Q5T5S1 534 aa15.72■□□□□ 0.11
NFKB1-202ENST00000394820 CCDC186Q7Z3E2 898 aa15.72■□□□□ 0.11
NFKB1-202ENST00000394820 RAPGEF4Q8WZA2 1011 aa15.72■□□□□ 0.11
NFKB1-202ENST00000394820 IP6K1Q92551 441 aa15.72■□□□□ 0.11
NFKB1-202ENST00000394820 CGNQ9P2M7 1197 aaKnown RBP15.72■□□□□ 0.11
NFKB1-202ENST00000394820 MAP3K2Q9Y2U5 619 aa15.72■□□□□ 0.11
NFKB1-202ENST00000394820 PTGS1P23219 599 aa15.72■□□□□ 0.11
NFKB1-202ENST00000394820 RIC3Q7Z5B4 369 aa15.72■□□□□ 0.11
NFKB1-202ENST00000394820 RUFY2Q8WXA3 655 aa15.72■□□□□ 0.11
NFKB1-202ENST00000394820 ERCC4Q92889 916 aaPredicted RBP15.72■□□□□ 0.11
NFKB1-202ENST00000394820 U2AF2P26368 475 aaKnown RBP eCLIP15.72■□□□□ 0.11
NFKB1-202ENST00000394820 AK2P54819 239 aa15.72■□□□□ 0.11
NFKB1-202ENST00000394820 ZNF445P59923 1031 aa15.72■□□□□ 0.11
NFKB1-202ENST00000394820 HMGN5P82970 282 aaKnown RBP15.72■□□□□ 0.11
NFKB1-202ENST00000394820 KRT28Q7Z3Y7 464 aa15.72■□□□□ 0.11
NFKB1-202ENST00000394820 PPP1R9BQ96SB3 815 aa15.72■□□□□ 0.11
NFKB1-202ENST00000394820 A0A087WWV3 80 aa15.71■□□□□ 0.11
NFKB1-202ENST00000394820 RAB11FIP3O75154 756 aa15.71■□□□□ 0.11
NFKB1-202ENST00000394820 PROSER3Q2NL68 480 aa15.71■□□□□ 0.11
NFKB1-202ENST00000394820 SPATA32Q96LK8 384 aa15.71■□□□□ 0.11
NFKB1-202ENST00000394820 NUP62CLQ9H1M0 184 aa15.71■□□□□ 0.11
NFKB1-202ENST00000394820 NDUFB9Q9Y6M9 179 aa15.71■□□□□ 0.1
NFKB1-202ENST00000394820 TECPR2O15040 1411 aa15.7■□□□□ 0.1
NFKB1-202ENST00000394820 AK9Q5TCS8 1911 aa15.7■□□□□ 0.1
NFKB1-202ENST00000394820 CEP170BQ9Y4F5 1589 aaPredicted RBP15.7■□□□□ 0.1
NFKB1-202ENST00000394820 DYNC1I1O14576 645 aa15.7■□□□□ 0.1
NFKB1-202ENST00000394820 SYT1P21579 422 aa15.7■□□□□ 0.1
NFKB1-202ENST00000394820 CHMLP26374 656 aa15.7■□□□□ 0.1
NFKB1-202ENST00000394820 CCDC85AQ96PX6 553 aaPredicted RBP15.7■□□□□ 0.1
NFKB1-202ENST00000394820 ATP2B1P20020 1258 aa15.7■□□□□ 0.1
NFKB1-202ENST00000394820 RHPN1Q8TCX5 695 aa15.7■□□□□ 0.1
NFKB1-202ENST00000394820 ZDHHC9Q9Y397 364 aa15.7■□□□□ 0.1
NFKB1-202ENST00000394820 TULP1O00294 542 aaPredicted RBP15.69■□□□□ 0.1
NFKB1-202ENST00000394820 KRT85P78386 507 aa15.69■□□□□ 0.1
NFKB1-202ENST00000394820 KLHDC4Q8TBB5 520 aa15.69■□□□□ 0.1
NFKB1-202ENST00000394820 NRXN3Q9Y4C0 1643 aa15.69■□□□□ 0.1
NFKB1-202ENST00000394820 EIF4A1P60842 406 aaKnown RBP15.69■□□□□ 0.1
NFKB1-202ENST00000394820 CCDC112Q8NEF3 446 aa15.69■□□□□ 0.1
NFKB1-202ENST00000394820 ZFP91Q96JP5 570 aaPredicted RBP15.69■□□□□ 0.1
NFKB1-202ENST00000394820 ATP10DQ9P241 1426 aa15.69■□□□□ 0.1
NFKB1-202ENST00000394820 LIMCH1Q9UPQ0 1083 aa15.69■□□□□ 0.1
NFKB1-202ENST00000394820 USP31Q70CQ4 1352 aa15.69■□□□□ 0.1
NFKB1-202ENST00000394820 BIN1O00499 593 aa15.69■□□□□ 0.1
NFKB1-202ENST00000394820 SMC2O95347 1197 aa15.69■□□□□ 0.1
NFKB1-202ENST00000394820 KCNH5Q8NCM2 988 aa15.69■□□□□ 0.1
NFKB1-202ENST00000394820 TOMM22Q9NS69 142 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms