RNA–Protein interactions for RNA: ENST00000394767.2

CXXC4-201, Transcript of CXXC finger protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CXXC4, Length 5,565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-201ENST00000394767 VPS53Q5VIR6 699 aa23.31■■□□□ 1.32
CXXC4-201ENST00000394767 QRICH2Q9H0J4 1663 aa23.31■■□□□ 1.32
CXXC4-201ENST00000394767 IRS4O14654 1257 aaPredicted RBP23.31■■□□□ 1.32
CXXC4-201ENST00000394767 STK11IPQ8N1F8 1099 aa23.31■■□□□ 1.32
CXXC4-201ENST00000394767 IPO9Q96P70 1041 aaKnown RBP23.31■■□□□ 1.32
CXXC4-201ENST00000394767 WWC3Q9ULE0 1092 aa23.31■■□□□ 1.32
CXXC4-201ENST00000394767 PLEKHF1Q96S99 279 aa23.3■■□□□ 1.32
CXXC4-201ENST00000394767 SLC4A3P48751 1232 aa23.3■■□□□ 1.32
CXXC4-201ENST00000394767 TRIM37O94972 964 aa23.3■■□□□ 1.32
CXXC4-201ENST00000394767 SLC3A2P08195 630 aaKnown RBP23.3■■□□□ 1.32
CXXC4-201ENST00000394767 CWC27Q6UX04 472 aaKnown RBP23.3■■□□□ 1.32
CXXC4-201ENST00000394767 PLBD2Q8NHP8 589 aa23.3■■□□□ 1.32
CXXC4-201ENST00000394767 JCADQ9P266 1359 aa23.3■■□□□ 1.32
CXXC4-201ENST00000394767 FAM196AQ6ZSG2 479 aa23.3■■□□□ 1.32
CXXC4-201ENST00000394767 DLC1Q96QB1 1528 aa23.29■■□□□ 1.32
CXXC4-201ENST00000394767 PLCB2Q00722 1185 aa23.29■■□□□ 1.32
CXXC4-201ENST00000394767 ASAP1Q9ULH1 1129 aa23.29■■□□□ 1.32
CXXC4-201ENST00000394767 USP16Q9Y5T5 823 aa23.29■■□□□ 1.32
CXXC4-201ENST00000394767 MARCH6O60337 910 aa23.29■■□□□ 1.32
CXXC4-201ENST00000394767 GIGYF1O75420 1035 aaPredicted RBP23.28■■□□□ 1.32
CXXC4-201ENST00000394767 DEPDC5O75140 1603 aa23.28■■□□□ 1.32
CXXC4-201ENST00000394767 PSMA5P28066 241 aa23.28■■□□□ 1.32
CXXC4-201ENST00000394767 ZSCAN29Q8IWY8 852 aaPredicted RBP23.28■■□□□ 1.32
CXXC4-201ENST00000394767 FAM89AQ96GI7 184 aa23.27■■□□□ 1.32
CXXC4-201ENST00000394767 THRAP3Q9Y2W1 955 aaKnown RBP23.27■■□□□ 1.32
CXXC4-201ENST00000394767 RLBP1P12271 317 aa23.27■■□□□ 1.31
CXXC4-201ENST00000394767 SART3Q15020 963 aaKnown RBP23.26■■□□□ 1.31
CXXC4-201ENST00000394767 MCTP1Q6DN14 999 aa23.26■■□□□ 1.31
CXXC4-201ENST00000394767 LOC102724428A0A0B4J2F2 783 aa23.26■■□□□ 1.31
CXXC4-201ENST00000394767 SIK1P57059 783 aa23.26■■□□□ 1.31
CXXC4-201ENST00000394767 CDK12Q9NYV4 1490 aaPredicted RBP23.26■■□□□ 1.31
CXXC4-201ENST00000394767 USP19O94966 1318 aa23.25■■□□□ 1.31
CXXC4-201ENST00000394767 NCBP3Q53F19 620 aaKnown RBP23.25■■□□□ 1.31
CXXC4-201ENST00000394767 RASSF8Q8NHQ8 419 aa23.25■■□□□ 1.31
CXXC4-201ENST00000394767 AIDAQ96BJ3 306 aa23.25■■□□□ 1.31
CXXC4-201ENST00000394767 METTL22Q9BUU2 404 aaPredicted RBP23.25■■□□□ 1.31
CXXC4-201ENST00000394767 TMEM131LA2VDJ0 1609 aa23.25■■□□□ 1.31
CXXC4-201ENST00000394767 CNBD1Q8NA66 436 aa23.25■■□□□ 1.31
CXXC4-201ENST00000394767 TRIM29Q14134 588 aa23.24■■□□□ 1.31
CXXC4-201ENST00000394767 REREQ9P2R6 1566 aa23.24■■□□□ 1.31
CXXC4-201ENST00000394767 BLMP54132 1417 aaPredicted RBP23.24■■□□□ 1.31
CXXC4-201ENST00000394767 TDO2P48775 406 aa23.24■■□□□ 1.31
CXXC4-201ENST00000394767 SNRKQ9NRH2 765 aa23.24■■□□□ 1.31
CXXC4-201ENST00000394767 DZIP1Q86YF9 867 aaKnown RBP23.24■■□□□ 1.31
CXXC4-201ENST00000394767 SF3A1Q15459 793 aaKnown RBP23.23■■□□□ 1.31
CXXC4-201ENST00000394767 FOXD4L6Q3SYB3 417 aaPredicted RBP23.23■■□□□ 1.31
CXXC4-201ENST00000394767 FOXD4L3Q6VB84 417 aaPredicted RBP23.23■■□□□ 1.31
CXXC4-201ENST00000394767 TMOD2Q9NZR1 351 aa23.23■■□□□ 1.31
CXXC4-201ENST00000394767 ATP8B2P98198 1209 aa23.23■■□□□ 1.31
CXXC4-201ENST00000394767 PARP10Q53GL7 1025 aa23.23■■□□□ 1.31
CXXC4-201ENST00000394767 RHPN1Q8TCX5 695 aa23.22■■□□□ 1.31
CXXC4-201ENST00000394767 PA2G4Q9UQ80 394 aaKnown RBP23.22■■□□□ 1.31
CXXC4-201ENST00000394767 MAP3K12Q12852 859 aa23.22■■□□□ 1.31
CXXC4-201ENST00000394767 ANKRD44Q8N8A2 993 aa23.22■■□□□ 1.31
CXXC4-201ENST00000394767 ATP2B2Q01814 1243 aa23.22■■□□□ 1.31
CXXC4-201ENST00000394767 IKQ13123 557 aaPredicted RBP23.22■■□□□ 1.31
CXXC4-201ENST00000394767 ECHDC1Q9NTX5 307 aa23.22■■□□□ 1.31
CXXC4-201ENST00000394767 PCDHB15Q9Y5E8 787 aa23.22■■□□□ 1.31
CXXC4-201ENST00000394767 SH3TC1Q8TE82 1336 aa23.22■■□□□ 1.31
CXXC4-201ENST00000394767 CDK11BP21127 795 aaKnown RBP23.22■■□□□ 1.31
CXXC4-201ENST00000394767 SKAP1Q86WV1 359 aa23.22■■□□□ 1.31
CXXC4-201ENST00000394767 USP31Q70CQ4 1352 aa23.22■■□□□ 1.31
CXXC4-201ENST00000394767 HCLS1P14317 486 aaPredicted RBP23.21■■□□□ 1.31
CXXC4-201ENST00000394767 CPSF1Q10570 1443 aaKnown RBP23.21■■□□□ 1.31
CXXC4-201ENST00000394767 NEK4P51957 841 aa23.21■■□□□ 1.31
CXXC4-201ENST00000394767 BCORL1Q5H9F3 1711 aa23.21■■□□□ 1.31
CXXC4-201ENST00000394767 MROH1Q8NDA8 1641 aa23.2■■□□□ 1.3
CXXC4-201ENST00000394767 CCDC191Q8NCU4 936 aa23.2■■□□□ 1.3
CXXC4-201ENST00000394767 IGHDP01880 384 aa23.19■■□□□ 1.3
CXXC4-201ENST00000394767 ATP2B3Q16720 1220 aa23.19■■□□□ 1.3
CXXC4-201ENST00000394767 DIP2AQ14689 1571 aa23.19■■□□□ 1.3
CXXC4-201ENST00000394767 NRXN1Q9ULB1 1477 aa23.19■■□□□ 1.3
CXXC4-201ENST00000394767 TECPR2O15040 1411 aa23.19■■□□□ 1.3
CXXC4-201ENST00000394767 NSFL1CQ9UNZ2 370 aaKnown RBP23.19■■□□□ 1.3
CXXC4-201ENST00000394767 IL15P40933 162 aaPredicted RBP23.19■■□□□ 1.3
CXXC4-201ENST00000394767 CCDC24Q8N4L8 307 aa23.19■■□□□ 1.3
CXXC4-201ENST00000394767 CYP27B1O15528 508 aa23.19■■□□□ 1.3
CXXC4-201ENST00000394767 KCNQ4P56696 695 aa23.19■■□□□ 1.3
CXXC4-201ENST00000394767 HELBQ8NG08 1087 aaPredicted RBP23.18■■□□□ 1.3
CXXC4-201ENST00000394767 BICC1Q9H694 974 aaKnown RBP23.18■■□□□ 1.3
CXXC4-201ENST00000394767 SMC3Q9UQE7 1217 aa23.18■■□□□ 1.3
CXXC4-201ENST00000394767 TSHZ3Q63HK5 1081 aa23.18■■□□□ 1.3
CXXC4-201ENST00000394767 GOLIM4O00461 696 aa23.17■■□□□ 1.3
CXXC4-201ENST00000394767 IQSEC3Q9UPP2 1182 aaPredicted RBP23.17■■□□□ 1.3
CXXC4-201ENST00000394767 CTNNA3Q9UI47 895 aa23.17■■□□□ 1.3
CXXC4-201ENST00000394767 CWC22Q9HCG8 908 aaKnown RBP23.17■■□□□ 1.3
CXXC4-201ENST00000394767 FOSBP53539 338 aa23.16■■□□□ 1.3
CXXC4-201ENST00000394767 GJD4Q96KN9 370 aaPredicted RBP23.16■■□□□ 1.3
CXXC4-201ENST00000394767 SPATA31A6Q5VVP1 1343 aa23.16■■□□□ 1.3
CXXC4-201ENST00000394767 PIGBQ92521 554 aa23.16■■□□□ 1.3
CXXC4-201ENST00000394767 USP5P45974 858 aa23.16■■□□□ 1.3
CXXC4-201ENST00000394767 PTMAP06454 111 aaKnown RBP23.15■■□□□ 1.3
CXXC4-201ENST00000394767 CSPP1Q1MSJ5 1256 aa23.15■■□□□ 1.3
CXXC4-201ENST00000394767 RBM6P78332 1123 aaKnown RBP23.15■■□□□ 1.3
CXXC4-201ENST00000394767 TTLL7Q6ZT98 887 aa23.15■■□□□ 1.3
CXXC4-201ENST00000394767 HDAC1Q13547 482 aaPredicted RBP23.15■■□□□ 1.3
CXXC4-201ENST00000394767 CCDC34Q96HJ3 373 aa23.14■■□□□ 1.3
CXXC4-201ENST00000394767 KDM4AO75164 1064 aa23.14■■□□□ 1.29
CXXC4-201ENST00000394767 CEP85Q6P2H3 762 aa23.14■■□□□ 1.29
CXXC4-201ENST00000394767 VPS37CA5D8V6 355 aaPredicted RBP23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms