RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 VAMP4O75379 141 aa25.95■■□□□ 1.75
CLDND1-202ENST00000394180 CAPN2P17655 700 aa25.95■■□□□ 1.75
CLDND1-202ENST00000394180 TNNT1P13805 278 aa25.95■■□□□ 1.74
CLDND1-202ENST00000394180 CYP2C19P33261 490 aa25.95■■□□□ 1.74
CLDND1-202ENST00000394180 IL13P35225 146 aa25.95■■□□□ 1.74
CLDND1-202ENST00000394180 ROBO1Q9Y6N7 1651 aa25.94■■□□□ 1.74
CLDND1-202ENST00000394180 NFAT5O94916 1531 aa25.94■■□□□ 1.74
CLDND1-202ENST00000394180 CCDC192P0DO97 292 aa25.94■■□□□ 1.74
CLDND1-202ENST00000394180 MPNDQ8N594 471 aa25.94■■□□□ 1.74
CLDND1-202ENST00000394180 C1orf115Q9H7X2 142 aa25.94■■□□□ 1.74
CLDND1-202ENST00000394180 KCNH5Q8NCM2 988 aa25.93■■□□□ 1.74
CLDND1-202ENST00000394180 MED1Q15648 1581 aaPredicted RBP25.93■■□□□ 1.74
CLDND1-202ENST00000394180 PIP4K2BP78356 416 aa25.92■■□□□ 1.74
CLDND1-202ENST00000394180 EIF4A2Q14240 407 aaKnown RBP25.92■■□□□ 1.74
CLDND1-202ENST00000394180 CCDC171Q6TFL3 1326 aa25.92■■□□□ 1.74
CLDND1-202ENST00000394180 FLT4P35916 1363 aa25.91■■□□□ 1.74
CLDND1-202ENST00000394180 CHRM1P11229 460 aaPredicted RBP25.91■■□□□ 1.74
CLDND1-202ENST00000394180 FOXD4L5Q5VV16 416 aaPredicted RBP25.91■■□□□ 1.74
CLDND1-202ENST00000394180 FAM200AQ8TCP9 573 aa25.91■■□□□ 1.74
CLDND1-202ENST00000394180 FOXD4L4Q8WXT5 416 aaPredicted RBP25.91■■□□□ 1.74
CLDND1-202ENST00000394180 ERO1AQ96HE7 468 aa25.91■■□□□ 1.74
CLDND1-202ENST00000394180 NHSL1Q5SYE7 1610 aa25.91■■□□□ 1.74
CLDND1-202ENST00000394180 SLIT3O75094 1523 aa25.91■■□□□ 1.74
CLDND1-202ENST00000394180 AP5Z1O43299 807 aa25.91■■□□□ 1.74
CLDND1-202ENST00000394180 HOXC9P31274 260 aa25.91■■□□□ 1.74
CLDND1-202ENST00000394180 TEX2Q8IWB9 1127 aa25.91■■□□□ 1.74
CLDND1-202ENST00000394180 NEMFO60524 1076 aa25.9■■□□□ 1.74
CLDND1-202ENST00000394180 HMOX1P09601 288 aa25.9■■□□□ 1.74
CLDND1-202ENST00000394180 LTN1O94822 1766 aa25.9■■□□□ 1.74
CLDND1-202ENST00000394180 ZC3H6P61129 1189 aaKnown RBP25.9■■□□□ 1.74
CLDND1-202ENST00000394180 ATP10DQ9P241 1426 aa25.89■■□□□ 1.74
CLDND1-202ENST00000394180 SMARCA5O60264 1052 aaPredicted RBP25.89■■□□□ 1.74
CLDND1-202ENST00000394180 SRCIN1Q9C0H9 1055 aa25.89■■□□□ 1.74
CLDND1-202ENST00000394180 FCHSD2O94868 740 aa25.88■■□□□ 1.73
CLDND1-202ENST00000394180 BMS1Q14692 1282 aaKnown RBP25.88■■□□□ 1.73
CLDND1-202ENST00000394180 KMT5BQ4FZB7 885 aa25.88■■□□□ 1.73
CLDND1-202ENST00000394180 PLCD3Q8N3E9 789 aa25.88■■□□□ 1.73
CLDND1-202ENST00000394180 TOM1O60784 492 aa25.88■■□□□ 1.73
CLDND1-202ENST00000394180 ZSCAN22P10073 491 aaPredicted RBP25.88■■□□□ 1.73
CLDND1-202ENST00000394180 MUM1L1Q5H9M0 696 aa25.88■■□□□ 1.73
CLDND1-202ENST00000394180 ARHGEF10O15013 1369 aa25.88■■□□□ 1.73
CLDND1-202ENST00000394180 KCND1Q9NSA2 647 aa25.87■■□□□ 1.73
CLDND1-202ENST00000394180 FEZ2Q9UHY8 353 aaPredicted RBP25.87■■□□□ 1.73
CLDND1-202ENST00000394180 UBAP1LF5GYI3 381 aa25.87■■□□□ 1.73
CLDND1-202ENST00000394180 CDC25BP30305 580 aa25.87■■□□□ 1.73
CLDND1-202ENST00000394180 CTR9Q6PD62 1173 aa25.87■■□□□ 1.73
CLDND1-202ENST00000394180 ARHGEF25Q86VW2 580 aa25.87■■□□□ 1.73
CLDND1-202ENST00000394180 LTV1Q96GA3 475 aaPredicted RBP25.87■■□□□ 1.73
CLDND1-202ENST00000394180 IFT57Q9NWB7 429 aa25.87■■□□□ 1.73
CLDND1-202ENST00000394180 KIF2AO00139 706 aaPredicted RBP25.86■■□□□ 1.73
CLDND1-202ENST00000394180 PTGS1P23219 599 aa25.86■■□□□ 1.73
CLDND1-202ENST00000394180 GNAI1P63096 354 aa25.86■■□□□ 1.73
CLDND1-202ENST00000394180 NOL10Q9BSC4 688 aaKnown RBP25.86■■□□□ 1.73
CLDND1-202ENST00000394180 CEP135Q66GS9 1140 aa25.85■■□□□ 1.73
CLDND1-202ENST00000394180 C16orf45Q96MC5 204 aaPredicted RBP25.84■■□□□ 1.73
CLDND1-202ENST00000394180 GDPD2Q9HCC8 539 aa25.84■■□□□ 1.73
CLDND1-202ENST00000394180 TCHHQ07283 1943 aa25.84■■□□□ 1.73
CLDND1-202ENST00000394180 RBM6P78332 1123 aaKnown RBP25.84■■□□□ 1.73
CLDND1-202ENST00000394180 ZSCAN25Q6NSZ9 544 aa25.84■■□□□ 1.73
CLDND1-202ENST00000394180 ESYT1Q9BSJ8 1104 aa25.84■■□□□ 1.73
CLDND1-202ENST00000394180 HTATSF1O43719 755 aaKnown RBP25.83■■□□□ 1.73
CLDND1-202ENST00000394180 AEBP1Q8IUX7 1158 aa25.83■■□□□ 1.73
CLDND1-202ENST00000394180 IP6K1Q92551 441 aa25.83■■□□□ 1.73
CLDND1-202ENST00000394180 PLA2G4DQ86XP0 818 aa25.83■■□□□ 1.72
CLDND1-202ENST00000394180 C16orf71Q8IYS4 520 aaPredicted RBP25.83■■□□□ 1.72
CLDND1-202ENST00000394180 SPC24Q8NBT2 197 aa25.83■■□□□ 1.72
CLDND1-202ENST00000394180 TUBGCP6Q96RT7 1819 aa25.83■■□□□ 1.72
CLDND1-202ENST00000394180 PHRF1Q9P1Y6 1649 aaKnown RBP25.83■■□□□ 1.72
CLDND1-202ENST00000394180 CAVIN2O95810 425 aa25.82■■□□□ 1.72
CLDND1-202ENST00000394180 CCDC186Q7Z3E2 898 aa25.82■■□□□ 1.72
CLDND1-202ENST00000394180 CNPY2Q9Y2B0 182 aa25.82■■□□□ 1.72
CLDND1-202ENST00000394180 TRIM6-TRIM34B2RNG4 842 aa25.82■■□□□ 1.72
CLDND1-202ENST00000394180 ZNF853P0CG23 659 aa25.82■■□□□ 1.72
CLDND1-202ENST00000394180 TRIM34Q9BYJ4 488 aa25.82■■□□□ 1.72
CLDND1-202ENST00000394180 AXIN2Q9Y2T1 843 aa25.82■■□□□ 1.72
CLDND1-202ENST00000394180 PRKAR2BP31323 418 aa25.81■■□□□ 1.72
CLDND1-202ENST00000394180 PLCB2Q00722 1185 aa25.81■■□□□ 1.72
CLDND1-202ENST00000394180 CERKQ8TCT0 537 aa25.81■■□□□ 1.72
CLDND1-202ENST00000394180 ZKSCAN7Q9P0L1 754 aaPredicted RBP25.81■■□□□ 1.72
CLDND1-202ENST00000394180 TPD52L1Q16890 204 aaPredicted RBP25.8■■□□□ 1.72
CLDND1-202ENST00000394180 SULT6B1Q6IMI4 303 aa25.8■■□□□ 1.72
CLDND1-202ENST00000394180 TXLNBQ8N3L3 684 aa25.8■■□□□ 1.72
CLDND1-202ENST00000394180 RGS22Q8NE09 1264 aa25.8■■□□□ 1.72
CLDND1-202ENST00000394180 GEMIN8Q9NWZ8 242 aaKnown RBP25.8■■□□□ 1.72
CLDND1-202ENST00000394180 CRYBG1Q9Y4K1 1723 aa25.8■■□□□ 1.72
CLDND1-202ENST00000394180 HAP1P54257 671 aaPredicted RBP25.8■■□□□ 1.72
CLDND1-202ENST00000394180 TEX35Q5T0J7 233 aa25.8■■□□□ 1.72
CLDND1-202ENST00000394180 GIMAP6Q6P9H5 292 aa25.8■■□□□ 1.72
CLDND1-202ENST00000394180 NYAP1Q6ZVC0 841 aa25.8■■□□□ 1.72
CLDND1-202ENST00000394180 RAD50Q92878 1312 aa25.8■■□□□ 1.72
CLDND1-202ENST00000394180 F13A1P00488 732 aa25.79■■□□□ 1.72
CLDND1-202ENST00000394180 TUBB4AP04350 444 aa25.79■■□□□ 1.72
CLDND1-202ENST00000394180 HNRNPH2P55795 449 aaKnown RBP25.79■■□□□ 1.72
CLDND1-202ENST00000394180 CHRNA2Q15822 529 aa25.79■■□□□ 1.72
CLDND1-202ENST00000394180 CEP85Q6P2H3 762 aa25.79■■□□□ 1.72
CLDND1-202ENST00000394180 EYA1Q99502 592 aa25.79■■□□□ 1.72
CLDND1-202ENST00000394180 AHDC1Q5TGY3 1603 aaPredicted RBP25.79■■□□□ 1.72
CLDND1-202ENST00000394180 H2AFXP16104 143 aaPredicted RBP25.78■■□□□ 1.72
CLDND1-202ENST00000394180 FBXO38Q6PIJ6 1188 aa25.78■■□□□ 1.72
CLDND1-202ENST00000394180 TDRD7Q8NHU6 1098 aaKnown RBP25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms