RNA–Protein interactions for RNA: ENST00000393888.1

CNP-201, Transcript of 2',3'-cyclic nucleotide 3' phosphodiesterase, humanhuman

TSL 1 (best) BASIC

Gene CNP, Length 2,583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNP-201ENST00000393888 FAM200AQ8TCP9 573 aa19.58■□□□□ 0.72
CNP-201ENST00000393888 DLC1Q96QB1 1528 aa19.58■□□□□ 0.72
CNP-201ENST00000393888 ME3Q16798 604 aa19.57■□□□□ 0.72
CNP-201ENST00000393888 CNTROBQ8N137 903 aa19.57■□□□□ 0.72
CNP-201ENST00000393888 PHAXQ9H814 394 aaKnown RBP19.57■□□□□ 0.72
CNP-201ENST00000393888 METP08581 1390 aa19.57■□□□□ 0.72
CNP-201ENST00000393888 MAP3K11Q16584 847 aa19.57■□□□□ 0.72
CNP-201ENST00000393888 ANO6Q4KMQ2 910 aa19.57■□□□□ 0.72
CNP-201ENST00000393888 NUP62CLQ9H1M0 184 aa19.57■□□□□ 0.72
CNP-201ENST00000393888 TFIP11Q9UBB9 837 aaKnown RBP19.57■□□□□ 0.72
CNP-201ENST00000393888 SRGAP3O43295 1099 aa19.56■□□□□ 0.72
CNP-201ENST00000393888 CDC37L1Q7L3B6 337 aa19.56■□□□□ 0.72
CNP-201ENST00000393888 SSH3Q8TE77 659 aa19.56■□□□□ 0.72
CNP-201ENST00000393888 CBX8Q9HC52 389 aa19.56■□□□□ 0.72
CNP-201ENST00000393888 AOX1Q06278 1338 aa19.56■□□□□ 0.72
CNP-201ENST00000393888 TTC21BQ7Z4L5 1316 aa19.56■□□□□ 0.72
CNP-201ENST00000393888 ZNF771Q7L3S4 317 aaPredicted RBP19.56■□□□□ 0.72
CNP-201ENST00000393888 ZNF592Q92610 1267 aa19.56■□□□□ 0.72
CNP-201ENST00000393888 TRIM5Q9C035 493 aa19.56■□□□□ 0.72
CNP-201ENST00000393888 C3P01024 1663 aa19.56■□□□□ 0.72
CNP-201ENST00000393888 SPATA31D1Q6ZQQ2 1576 aa19.56■□□□□ 0.72
CNP-201ENST00000393888 TNNT1P13805 278 aa19.55■□□□□ 0.72
CNP-201ENST00000393888 DACT1Q9NYF0 836 aa19.55■□□□□ 0.72
CNP-201ENST00000393888 NRKQ7Z2Y5 1582 aa19.55■□□□□ 0.72
CNP-201ENST00000393888 MON2Q7Z3U7 1717 aa19.55■□□□□ 0.72
CNP-201ENST00000393888 TNRQ92752 1358 aa19.55■□□□□ 0.72
CNP-201ENST00000393888 LARP1BQ659C4 914 aaKnown RBP19.55■□□□□ 0.72
CNP-201ENST00000393888 TCEANC2Q96MN5 208 aa19.55■□□□□ 0.72
CNP-201ENST00000393888 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.54■□□□□ 0.72
CNP-201ENST00000393888 PEAK1Q9H792 1746 aa19.54■□□□□ 0.72
CNP-201ENST00000393888 TNMDQ9H2S6 317 aa19.54■□□□□ 0.72
CNP-201ENST00000393888 EPB41L2O43491 1005 aaKnown RBP19.53■□□□□ 0.72
CNP-201ENST00000393888 NBPF7P0C2Y1 421 aaPredicted RBP19.53■□□□□ 0.72
CNP-201ENST00000393888 ZSCAN25Q6NSZ9 544 aa19.53■□□□□ 0.72
CNP-201ENST00000393888 ADAMTSL3P82987 1691 aa19.53■□□□□ 0.72
CNP-201ENST00000393888 XRN1Q8IZH2 1706 aaKnown RBP19.53■□□□□ 0.72
CNP-201ENST00000393888 OGFRQ9NZT2 677 aa19.53■□□□□ 0.72
CNP-201ENST00000393888 TPCN1Q9ULQ1 816 aa19.53■□□□□ 0.72
CNP-201ENST00000393888 CYP46A1Q9Y6A2 500 aa19.53■□□□□ 0.72
CNP-201ENST00000393888 KRT85P78386 507 aa19.52■□□□□ 0.72
CNP-201ENST00000393888 CTNNA3Q9UI47 895 aa19.52■□□□□ 0.72
CNP-201ENST00000393888 ACEP12821 1306 aa19.52■□□□□ 0.72
CNP-201ENST00000393888 TPD52L1Q16890 204 aaPredicted RBP19.52■□□□□ 0.72
CNP-201ENST00000393888 VPS53Q5VIR6 699 aa19.52■□□□□ 0.72
CNP-201ENST00000393888 RAB11FIP3O75154 756 aa19.51■□□□□ 0.71
CNP-201ENST00000393888 ZNF75DP51815 510 aa19.51■□□□□ 0.71
CNP-201ENST00000393888 OS9Q13438 667 aaPredicted RBP19.51■□□□□ 0.71
CNP-201ENST00000393888 FEZ1Q99689 392 aa19.51■□□□□ 0.71
CNP-201ENST00000393888 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.51■□□□□ 0.71
CNP-201ENST00000393888 V9GYY5 206 aaPredicted RBP19.51■□□□□ 0.71
CNP-201ENST00000393888 SMTNL1A8MU46 457 aa19.51■□□□□ 0.71
CNP-201ENST00000393888 CCDC144BQ3MJ40 725 aa19.51■□□□□ 0.71
CNP-201ENST00000393888 CCDC144CPQ8IYA2 1237 aa19.51■□□□□ 0.71
CNP-201ENST00000393888 CACTINQ8WUQ7 758 aaKnown RBP19.51■□□□□ 0.71
CNP-201ENST00000393888 KIF1BPQ96EK5 621 aa19.51■□□□□ 0.71
CNP-201ENST00000393888 DNAJC25Q9H1X3 360 aa19.51■□□□□ 0.71
CNP-201ENST00000393888 GOLGA6L4A6NEF3 574 aa19.5■□□□□ 0.71
CNP-201ENST00000393888 ZSWIM6Q9HCJ5 1215 aa19.5■□□□□ 0.71
CNP-201ENST00000393888 ARHGEF10O15013 1369 aa19.5■□□□□ 0.71
CNP-201ENST00000393888 EIF2S2P20042 333 aaKnown RBP19.5■□□□□ 0.71
CNP-201ENST00000393888 POLA2Q14181 598 aa19.5■□□□□ 0.71
CNP-201ENST00000393888 ARID5BQ14865 1188 aa19.5■□□□□ 0.71
CNP-201ENST00000393888 EYA1Q99502 592 aa19.5■□□□□ 0.71
CNP-201ENST00000393888 ITSN1Q15811 1721 aa19.5■□□□□ 0.71
CNP-201ENST00000393888 CCDC112Q8NEF3 446 aa19.49■□□□□ 0.71
CNP-201ENST00000393888 CGNQ9P2M7 1197 aaKnown RBP19.49■□□□□ 0.71
CNP-201ENST00000393888 KCNJ4P48050 445 aa19.49■□□□□ 0.71
CNP-201ENST00000393888 STK3Q13188 491 aa19.49■□□□□ 0.71
CNP-201ENST00000393888 ZSCAN31Q96LW9 406 aaPredicted RBP19.49■□□□□ 0.71
CNP-201ENST00000393888 SH2B1Q9NRF2 756 aaPredicted RBP19.49■□□□□ 0.71
CNP-201ENST00000393888 CLIP2Q9UDT6 1046 aa19.49■□□□□ 0.71
CNP-201ENST00000393888 PLA2G4DQ86XP0 818 aa19.48■□□□□ 0.71
CNP-201ENST00000393888 SPATA32Q96LK8 384 aa19.48■□□□□ 0.71
CNP-201ENST00000393888 AKAP12Q02952 1782 aa19.48■□□□□ 0.71
CNP-201ENST00000393888 SETD1AO15047 1707 aaKnown RBP19.48■□□□□ 0.71
CNP-201ENST00000393888 USP27XA6NNY8 438 aa19.48■□□□□ 0.71
CNP-201ENST00000393888 NR1I2O75469 434 aa19.48■□□□□ 0.71
CNP-201ENST00000393888 A2ML1A8K2U0 1454 aa19.48■□□□□ 0.71
CNP-201ENST00000393888 HDGFL1Q5TGJ6 251 aa19.47■□□□□ 0.71
CNP-201ENST00000393888 KDM4FA0A1W2PPD8 638 aa19.47■□□□□ 0.71
CNP-201ENST00000393888 ZNF165P49910 485 aa19.47■□□□□ 0.71
CNP-201ENST00000393888 LARP1Q6PKG0 1096 aaKnown RBP19.47■□□□□ 0.71
CNP-201ENST00000393888 IL17REQ8NFR9 667 aa19.46■□□□□ 0.71
CNP-201ENST00000393888 RBM8AQ9Y5S9 174 aaKnown RBP19.46■□□□□ 0.71
CNP-201ENST00000393888 TAF6LQ9Y6J9 622 aa19.46■□□□□ 0.71
CNP-201ENST00000393888 FAM208AQ9UK61 1670 aaKnown RBP19.46■□□□□ 0.71
CNP-201ENST00000393888 RGPD1P0DJD0 1748 aa19.46■□□□□ 0.71
CNP-201ENST00000393888 ANXA1P04083 346 aa19.46■□□□□ 0.71
CNP-201ENST00000393888 FAM227BQ96M60 508 aa19.46■□□□□ 0.71
CNP-201ENST00000393888 DDX41Q9UJV9 622 aaKnown RBP19.46■□□□□ 0.71
CNP-201ENST00000393888 A0A087WWV3 80 aa19.45■□□□□ 0.7
CNP-201ENST00000393888 TAF7Q15545 349 aaPredicted RBP19.45■□□□□ 0.7
CNP-201ENST00000393888 CEP135Q66GS9 1140 aa19.45■□□□□ 0.7
CNP-201ENST00000393888 CREB3L3Q68CJ9 461 aa19.45■□□□□ 0.7
CNP-201ENST00000393888 BICD2Q8TD16 824 aa19.45■□□□□ 0.7
CNP-201ENST00000393888 OVOS2A0A0J9YW53 1432 aa19.45■□□□□ 0.7
CNP-201ENST00000393888 OVOS2Q6IE36 1432 aa19.45■□□□□ 0.7
CNP-201ENST00000393888 GNAT3A8MTJ3 354 aa19.45■□□□□ 0.7
CNP-201ENST00000393888 ZBTB22O15209 634 aa19.45■□□□□ 0.7
CNP-201ENST00000393888 GLRX3O76003 335 aaKnown RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms