RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 SPATA31A7Q8IWB4 1347 aa27.41■■□□□ 1.98
HMGA2-203ENST00000393578 HSP90AB4PQ58FF6 505 aa27.41■■□□□ 1.98
HMGA2-203ENST00000393578 CDC45O75419 566 aa27.4■■□□□ 1.98
HMGA2-203ENST00000393578 A1BGP04217 495 aa27.4■■□□□ 1.98
HMGA2-203ENST00000393578 PDE1AP54750 535 aa27.4■■□□□ 1.98
HMGA2-203ENST00000393578 SALL3Q9BXA9 1300 aa27.4■■□□□ 1.98
HMGA2-203ENST00000393578 TBC1D9Q6ZT07 1266 aa27.4■■□□□ 1.98
HMGA2-203ENST00000393578 DDB1Q16531 1140 aa27.39■■□□□ 1.97
HMGA2-203ENST00000393578 SUCLG2Q96I99 432 aa27.39■■□□□ 1.97
HMGA2-203ENST00000393578 C22orf23Q9BZE7 217 aa27.39■■□□□ 1.97
HMGA2-203ENST00000393578 KAZALD1Q96I82 304 aa27.38■■□□□ 1.97
HMGA2-203ENST00000393578 JCADQ9P266 1359 aa27.37■■□□□ 1.97
HMGA2-203ENST00000393578 BARGINQ6ZT62 677 aa27.37■■□□□ 1.97
HMGA2-203ENST00000393578 EIF5BO60841 1220 aaKnown RBP27.37■■□□□ 1.97
HMGA2-203ENST00000393578 KIF1BPQ96EK5 621 aa27.37■■□□□ 1.97
HMGA2-203ENST00000393578 MX1P20591 662 aa27.36■■□□□ 1.97
HMGA2-203ENST00000393578 RHPN1Q8TCX5 695 aa27.36■■□□□ 1.97
HMGA2-203ENST00000393578 BICC1Q9H694 974 aaKnown RBP27.35■■□□□ 1.97
HMGA2-203ENST00000393578 DAXXQ9UER7 740 aaPredicted RBP27.35■■□□□ 1.97
HMGA2-203ENST00000393578 STAP2Q9UGK3 403 aa27.35■■□□□ 1.97
HMGA2-203ENST00000393578 SDSP20132 328 aa27.35■■□□□ 1.97
HMGA2-203ENST00000393578 AFDNP55196 1824 aaKnown RBP27.34■■□□□ 1.97
HMGA2-203ENST00000393578 STARD3NLO95772 234 aa27.34■■□□□ 1.97
HMGA2-203ENST00000393578 TTLL7Q6ZT98 887 aa27.34■■□□□ 1.97
HMGA2-203ENST00000393578 UNC5CLQ8IV45 518 aa27.33■■□□□ 1.97
HMGA2-203ENST00000393578 RBM42Q9BTD8 480 aaKnown RBP27.33■■□□□ 1.97
HMGA2-203ENST00000393578 CCDC9Q9Y3X0 531 aaKnown RBP27.33■■□□□ 1.97
HMGA2-203ENST00000393578 COL15A1P39059 1388 aa27.33■■□□□ 1.97
HMGA2-203ENST00000393578 NUP188Q5SRE5 1749 aa27.33■■□□□ 1.97
HMGA2-203ENST00000393578 DNAJC10Q8IXB1 793 aa27.33■■□□□ 1.97
HMGA2-203ENST00000393578 AOX1Q06278 1338 aa27.32■■□□□ 1.96
HMGA2-203ENST00000393578 SYTL4Q96C24 671 aaPredicted RBP27.32■■□□□ 1.96
HMGA2-203ENST00000393578 IL1RAPL2Q9NP60 686 aa27.32■■□□□ 1.96
HMGA2-203ENST00000393578 ATP5J2-PTCD1G3V325 749 aa27.31■■□□□ 1.96
HMGA2-203ENST00000393578 PRIM1P49642 420 aaKnown RBP27.31■■□□□ 1.96
HMGA2-203ENST00000393578 AEBP2Q6ZN18 517 aaPredicted RBP27.31■■□□□ 1.96
HMGA2-203ENST00000393578 DOT1LQ8TEK3 1739 aa27.31■■□□□ 1.96
HMGA2-203ENST00000393578 RBM25P49756 843 aaKnown RBP27.3■■□□□ 1.96
HMGA2-203ENST00000393578 ERC1Q8IUD2 1116 aa27.3■■□□□ 1.96
HMGA2-203ENST00000393578 OS9Q13438 667 aaPredicted RBP27.29■■□□□ 1.96
HMGA2-203ENST00000393578 CERKQ8TCT0 537 aa27.29■■□□□ 1.96
HMGA2-203ENST00000393578 ANP32EQ9BTT0 268 aa27.29■■□□□ 1.96
HMGA2-203ENST00000393578 A0A087WZG4 1122 aa27.29■■□□□ 1.96
HMGA2-203ENST00000393578 CASC1Q6TDU7 716 aa27.29■■□□□ 1.96
HMGA2-203ENST00000393578 NGLY1Q96IV0 654 aa27.29■■□□□ 1.96
HMGA2-203ENST00000393578 UBE3BQ7Z3V4 1068 aa27.28■■□□□ 1.96
HMGA2-203ENST00000393578 MARCH10Q8NA82 808 aaPredicted RBP27.28■■□□□ 1.96
HMGA2-203ENST00000393578 KAT6BQ8WYB5 2073 aa27.28■■□□□ 1.96
HMGA2-203ENST00000393578 BECN1Q14457 450 aa27.28■■□□□ 1.96
HMGA2-203ENST00000393578 C8orf37Q96NL8 207 aa27.28■■□□□ 1.96
HMGA2-203ENST00000393578 BCL9LQ86UU0 1499 aa27.27■■□□□ 1.96
HMGA2-203ENST00000393578 ZBTB3Q9H5J0 574 aa27.27■■□□□ 1.96
HMGA2-203ENST00000393578 CASP7P55210 303 aa27.26■■□□□ 1.95
HMGA2-203ENST00000393578 VPS72Q15906 364 aa27.26■■□□□ 1.95
HMGA2-203ENST00000393578 SLC4A9Q96Q91 983 aa27.26■■□□□ 1.95
HMGA2-203ENST00000393578 CWC25Q9NXE8 425 aaPredicted RBP27.26■■□□□ 1.95
HMGA2-203ENST00000393578 PA2G4Q9UQ80 394 aaKnown RBP27.26■■□□□ 1.95
HMGA2-203ENST00000393578 TUBGCP6Q96RT7 1819 aa27.26■■□□□ 1.95
HMGA2-203ENST00000393578 SPATA31A6Q5VVP1 1343 aa27.26■■□□□ 1.95
HMGA2-203ENST00000393578 SLC4A3P48751 1232 aa27.26■■□□□ 1.95
HMGA2-203ENST00000393578 EPHA10Q5JZY3 1008 aa27.26■■□□□ 1.95
HMGA2-203ENST00000393578 TSHZ3Q63HK5 1081 aa27.26■■□□□ 1.95
HMGA2-203ENST00000393578 CCDC191Q8NCU4 936 aa27.26■■□□□ 1.95
HMGA2-203ENST00000393578 H7C1W4 665 aa27.25■■□□□ 1.95
HMGA2-203ENST00000393578 CYP19A1P11511 503 aaPredicted RBP27.25■■□□□ 1.95
HMGA2-203ENST00000393578 RABL6Q3YEC7 729 aaPredicted RBP27.25■■□□□ 1.95
HMGA2-203ENST00000393578 NUTM1Q86Y26 1132 aa27.24■■□□□ 1.95
HMGA2-203ENST00000393578 FNBP4Q8N3X1 1017 aaPredicted RBP27.24■■□□□ 1.95
HMGA2-203ENST00000393578 CLASRPQ8N2M8 674 aaKnown RBP27.24■■□□□ 1.95
HMGA2-203ENST00000393578 G3BP1Q13283 466 aaKnown RBP eCLIP27.23■■□□□ 1.95
HMGA2-203ENST00000393578 KIF6Q6ZMV9 814 aa27.23■■□□□ 1.95
HMGA2-203ENST00000393578 JARID2Q92833 1246 aaPredicted RBP27.22■■□□□ 1.95
HMGA2-203ENST00000393578 USP42Q9H9J4 1324 aaKnown RBP27.22■■□□□ 1.95
HMGA2-203ENST00000393578 ZNF330Q9Y3S2 320 aaPredicted RBP27.21■■□□□ 1.95
HMGA2-203ENST00000393578 TCIRG1Q13488 830 aa27.2■■□□□ 1.95
HMGA2-203ENST00000393578 ISCA1Q9BUE6 129 aa27.2■■□□□ 1.95
HMGA2-203ENST00000393578 TJP1Q07157 1748 aa27.2■■□□□ 1.94
HMGA2-203ENST00000393578 TRIM28Q13263 835 aaKnown RBP27.2■■□□□ 1.94
HMGA2-203ENST00000393578 FAM98CQ17RN3 349 aaKnown RBP27.2■■□□□ 1.94
HMGA2-203ENST00000393578 COPRSQ9NQ92 184 aa27.2■■□□□ 1.94
HMGA2-203ENST00000393578 TTC41PQ6P2S7 1318 aa27.2■■□□□ 1.94
HMGA2-203ENST00000393578 PI4K2BQ8TCG2 481 aa27.19■■□□□ 1.94
HMGA2-203ENST00000393578 ACSBG1Q96GR2 724 aa27.19■■□□□ 1.94
HMGA2-203ENST00000393578 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.19■■□□□ 1.94
HMGA2-203ENST00000393578 SASH1O94885 1247 aa27.18■■□□□ 1.94
HMGA2-203ENST00000393578 TRIM6-TRIM34B2RNG4 842 aa27.18■■□□□ 1.94
HMGA2-203ENST00000393578 MAP3K15Q6ZN16 1313 aa27.18■■□□□ 1.94
HMGA2-203ENST00000393578 RFX5P48382 616 aaPredicted RBP27.17■■□□□ 1.94
HMGA2-203ENST00000393578 FOXO4P98177 505 aa27.17■■□□□ 1.94
HMGA2-203ENST00000393578 REC8O95072 547 aa27.16■■□□□ 1.94
HMGA2-203ENST00000393578 IFIT2P09913 472 aaKnown RBP27.16■■□□□ 1.94
HMGA2-203ENST00000393578 RILPL2Q969X0 211 aa27.16■■□□□ 1.94
HMGA2-203ENST00000393578 ZBTB1Q9Y2K1 713 aa27.16■■□□□ 1.94
HMGA2-203ENST00000393578 ERC2O15083 957 aa27.15■■□□□ 1.94
HMGA2-203ENST00000393578 PTPN12Q05209 780 aaKnown RBP27.15■■□□□ 1.94
HMGA2-203ENST00000393578 KLHDC4Q8TBB5 520 aa27.15■■□□□ 1.94
HMGA2-203ENST00000393578 GPATCH3Q96I76 525 aa27.15■■□□□ 1.94
HMGA2-203ENST00000393578 TBC1D2Q9BYX2 928 aa27.15■■□□□ 1.94
HMGA2-203ENST00000393578 SIL1Q9H173 461 aa27.15■■□□□ 1.94
HMGA2-203ENST00000393578 A0A0G2JS52 829 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms