RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 CCDC173Q0VFZ6 552 aa12.58□□□□□ -0.4
CALD1-203ENST00000393118 BICD2Q8TD16 824 aa12.58□□□□□ -0.4
CALD1-203ENST00000393118 SETD1BQ9UPS6 1966 aaKnown RBP12.58□□□□□ -0.4
CALD1-203ENST00000393118 FAM177BA6PVY3 158 aa12.57□□□□□ -0.4
CALD1-203ENST00000393118 GNL2Q13823 731 aaKnown RBP12.57□□□□□ -0.4
CALD1-203ENST00000393118 UNC5CLQ8IV45 518 aa12.57□□□□□ -0.4
CALD1-203ENST00000393118 KIF24Q5T7B8 1368 aa12.57□□□□□ -0.4
CALD1-203ENST00000393118 NPHP1O15259 732 aa12.57□□□□□ -0.4
CALD1-203ENST00000393118 LARP1BQ659C4 914 aaKnown RBP12.57□□□□□ -0.4
CALD1-203ENST00000393118 TOMM22Q9NS69 142 aa12.57□□□□□ -0.4
CALD1-203ENST00000393118 PALD1Q9ULE6 856 aa12.57□□□□□ -0.4
CALD1-203ENST00000393118 HIP1O00291 1037 aa12.57□□□□□ -0.4
CALD1-203ENST00000393118 CEBPZQ03701 1054 aaKnown RBP12.57□□□□□ -0.4
CALD1-203ENST00000393118 TSPY26PQ9H489 355 aa12.57□□□□□ -0.4
CALD1-203ENST00000393118 APPP05067 770 aa12.56□□□□□ -0.4
CALD1-203ENST00000393118 IFNL2Q8IZJ0 200 aa12.56□□□□□ -0.4
CALD1-203ENST00000393118 ZBTB3Q9H5J0 574 aa12.56□□□□□ -0.4
CALD1-203ENST00000393118 LIMCH1Q9UPQ0 1083 aa12.56□□□□□ -0.4
CALD1-203ENST00000393118 SIGLEC1Q9BZZ2 1709 aa12.56□□□□□ -0.4
CALD1-203ENST00000393118 ANKRD13DQ6ZTN6 518 aa12.56□□□□□ -0.4
CALD1-203ENST00000393118 PRAMEF22A3QJZ6 481 aa12.56□□□□□ -0.4
CALD1-203ENST00000393118 VGLL3A8MV65 326 aa12.56□□□□□ -0.4
CALD1-203ENST00000393118 ZSCAN23Q3MJ62 389 aa12.56□□□□□ -0.4
CALD1-203ENST00000393118 CGNQ9P2M7 1197 aaKnown RBP12.56□□□□□ -0.4
CALD1-203ENST00000393118 NECAB1Q8N987 351 aa12.55□□□□□ -0.4
CALD1-203ENST00000393118 FKBP4Q02790 459 aaKnown RBP eCLIP12.55□□□□□ -0.4
CALD1-203ENST00000393118 PROSER3Q2NL68 480 aa12.55□□□□□ -0.4
CALD1-203ENST00000393118 LINS1Q8NG48 757 aa12.55□□□□□ -0.4
CALD1-203ENST00000393118 FBXW7Q969H0 707 aa12.55□□□□□ -0.4
CALD1-203ENST00000393118 BICC1Q9H694 974 aaKnown RBP12.55□□□□□ -0.4
CALD1-203ENST00000393118 PPFIA3O75145 1194 aa12.54□□□□□ -0.4
CALD1-203ENST00000393118 KDM4AO75164 1064 aa12.54□□□□□ -0.4
CALD1-203ENST00000393118 SF3A1Q15459 793 aaKnown RBP12.54□□□□□ -0.4
CALD1-203ENST00000393118 EVI5LQ96CN4 794 aa12.54□□□□□ -0.4
CALD1-203ENST00000393118 DDX11Q96FC9 970 aa12.54□□□□□ -0.4
CALD1-203ENST00000393118 FMNL2Q96PY5 1086 aa12.54□□□□□ -0.4
CALD1-203ENST00000393118 SHPRHQ149N8 1683 aa12.54□□□□□ -0.4
CALD1-203ENST00000393118 ALDH1L1O75891 902 aa12.54□□□□□ -0.4
CALD1-203ENST00000393118 KAT6BQ8WYB5 2073 aa12.53□□□□□ -0.4
CALD1-203ENST00000393118 MYO5BQ9ULV0 1848 aa12.53□□□□□ -0.4
CALD1-203ENST00000393118 ANAPC15P60006 121 aa12.53□□□□□ -0.4
CALD1-203ENST00000393118 KIF2CQ99661 725 aa12.53□□□□□ -0.4
CALD1-203ENST00000393118 SNRPA1P09661 255 aaKnown RBP12.53□□□□□ -0.4
CALD1-203ENST00000393118 SSH3Q8TE77 659 aa12.53□□□□□ -0.4
CALD1-203ENST00000393118 C19orf44Q9H6X5 657 aa12.53□□□□□ -0.4
CALD1-203ENST00000393118 ADAMTS13Q76LX8 1427 aa12.53□□□□□ -0.4
CALD1-203ENST00000393118 MAP2P11137 1827 aaKnown RBP12.53□□□□□ -0.4
CALD1-203ENST00000393118 IGSF3O75054 1194 aa12.53□□□□□ -0.4
CALD1-203ENST00000393118 PRIM1P49642 420 aaKnown RBP12.53□□□□□ -0.4
CALD1-203ENST00000393118 HSPA2P54652 639 aa12.53□□□□□ -0.4
CALD1-203ENST00000393118 AK2P54819 239 aa12.53□□□□□ -0.4
CALD1-203ENST00000393118 KIF3AQ9Y496 699 aa12.53□□□□□ -0.4
CALD1-203ENST00000393118 ZNF790Q6PG37 636 aa12.52□□□□□ -0.4
CALD1-203ENST00000393118 DDX46Q7L014 1031 aaKnown RBP12.52□□□□□ -0.4
CALD1-203ENST00000393118 DLC1Q96QB1 1528 aa12.52□□□□□ -0.4
CALD1-203ENST00000393118 GJB2P29033 226 aa12.52□□□□□ -0.41
CALD1-203ENST00000393118 GAS2L3Q86XJ1 694 aa12.52□□□□□ -0.41
CALD1-203ENST00000393118 DDX21Q9NR30 783 aaKnown RBP eCLIP12.52□□□□□ -0.41
CALD1-203ENST00000393118 BABAM1Q9NWV8 329 aa12.52□□□□□ -0.41
CALD1-203ENST00000393118 RBM8AQ9Y5S9 174 aaKnown RBP12.52□□□□□ -0.41
CALD1-203ENST00000393118 STX6O43752 255 aa12.52□□□□□ -0.41
CALD1-203ENST00000393118 GIGYF1O75420 1035 aaPredicted RBP12.52□□□□□ -0.41
CALD1-203ENST00000393118 BEND3Q5T5X7 828 aa12.52□□□□□ -0.41
CALD1-203ENST00000393118 NDUFB9Q9Y6M9 179 aa12.52□□□□□ -0.41
CALD1-203ENST00000393118 IFT172Q9UG01 1749 aa12.52□□□□□ -0.41
CALD1-203ENST00000393118 CPLX1O14810 134 aa12.51□□□□□ -0.41
CALD1-203ENST00000393118 PDCP20941 246 aa12.51□□□□□ -0.41
CALD1-203ENST00000393118 SUCLG2Q96I99 432 aa12.51□□□□□ -0.41
CALD1-203ENST00000393118 IBTKQ9P2D0 1353 aaPredicted RBP12.51□□□□□ -0.41
CALD1-203ENST00000393118 CCDC57Q2TAC2 916 aa12.51□□□□□ -0.41
CALD1-203ENST00000393118 NMIQ13287 307 aaPredicted RBP12.51□□□□□ -0.41
CALD1-203ENST00000393118 CDC42BPGQ6DT37 1551 aa12.51□□□□□ -0.41
CALD1-203ENST00000393118 LMBR1LQ6UX01 489 aa12.51□□□□□ -0.41
CALD1-203ENST00000393118 ZNF496Q96IT1 587 aaPredicted RBP12.51□□□□□ -0.41
CALD1-203ENST00000393118 ZSCAN31Q96LW9 406 aaPredicted RBP12.51□□□□□ -0.41
CALD1-203ENST00000393118 CEP126Q9P2H0 1117 aa12.51□□□□□ -0.41
CALD1-203ENST00000393118 CNPY2Q9Y2B0 182 aa12.51□□□□□ -0.41
CALD1-203ENST00000393118 RIMBP3CA6NJZ7 1639 aa12.51□□□□□ -0.41
CALD1-203ENST00000393118 RIMBP3BA6NNM3 1639 aa12.51□□□□□ -0.41
CALD1-203ENST00000393118 RIMBP3Q9UFD9 1639 aa12.51□□□□□ -0.41
CALD1-203ENST00000393118 SGSM2O43147 1006 aa12.5□□□□□ -0.41
CALD1-203ENST00000393118 PAXIP1Q6ZW49 1069 aaPredicted RBP12.5□□□□□ -0.41
CALD1-203ENST00000393118 SNRKQ9NRH2 765 aa12.5□□□□□ -0.41
CALD1-203ENST00000393118 KRT85P78386 507 aa12.5□□□□□ -0.41
CALD1-203ENST00000393118 LRRC2Q9BYS8 371 aa12.5□□□□□ -0.41
CALD1-203ENST00000393118 AGLP35573 1532 aa12.5□□□□□ -0.41
CALD1-203ENST00000393118 RICTORQ6R327 1708 aa12.5□□□□□ -0.41
CALD1-203ENST00000393118 OVOS2A0A0J9YW53 1432 aa12.5□□□□□ -0.41
CALD1-203ENST00000393118 OVOS2Q6IE36 1432 aa12.5□□□□□ -0.41
CALD1-203ENST00000393118 GOLIM4O00461 696 aa12.5□□□□□ -0.41
CALD1-203ENST00000393118 HOXB7P09629 217 aa12.5□□□□□ -0.41
CALD1-203ENST00000393118 CAMK4Q16566 473 aa12.5□□□□□ -0.41
CALD1-203ENST00000393118 FAM227BQ96M60 508 aa12.5□□□□□ -0.41
CALD1-203ENST00000393118 TFIP11Q9UBB9 837 aaKnown RBP12.5□□□□□ -0.41
CALD1-203ENST00000393118 USP32Q8NFA0 1604 aa12.5□□□□□ -0.41
CALD1-203ENST00000393118 GTF2E1P29083 439 aaPredicted RBP12.49□□□□□ -0.41
CALD1-203ENST00000393118 USP48Q86UV5 1035 aa12.49□□□□□ -0.41
CALD1-203ENST00000393118 ADGRB2O60241 1585 aa12.49□□□□□ -0.41
CALD1-203ENST00000393118 CRB1P82279 1406 aa12.49□□□□□ -0.41
CALD1-203ENST00000393118 ANKRD1Q15327 319 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms