RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 RHOQP17081 205 aa5.38□□□□□ -1.55
PTPRC-205ENST00000391970 ATP4AP20648 1035 aa5.38□□□□□ -1.55
PTPRC-205ENST00000391970 NPAS4Q8IUM7 802 aa5.38□□□□□ -1.55
PTPRC-205ENST00000391970 RHPN1Q8TCX5 695 aa5.38□□□□□ -1.55
PTPRC-205ENST00000391970 AIDAQ96BJ3 306 aa5.38□□□□□ -1.55
PTPRC-205ENST00000391970 ZFP42Q96MM3 310 aa5.38□□□□□ -1.55
PTPRC-205ENST00000391970 RBCK1Q9BYM8 510 aa5.38□□□□□ -1.55
PTPRC-205ENST00000391970 GPC6Q9Y625 555 aaPredicted RBP5.38□□□□□ -1.55
PTPRC-205ENST00000391970 A0A1B0GTH6 734 aa5.37□□□□□ -1.55
PTPRC-205ENST00000391970 TGFBR3LH3BV60 316 aa5.37□□□□□ -1.55
PTPRC-205ENST00000391970 NDUFB5O43674 189 aa5.37□□□□□ -1.55
PTPRC-205ENST00000391970 TATP17735 454 aaPredicted RBP5.37□□□□□ -1.55
PTPRC-205ENST00000391970 ZSCAN29Q8IWY8 852 aaPredicted RBP5.37□□□□□ -1.55
PTPRC-205ENST00000391970 RGL4Q8IZJ4 473 aa5.37□□□□□ -1.55
PTPRC-205ENST00000391970 KLRG1Q96E93 195 aa5.37□□□□□ -1.55
PTPRC-205ENST00000391970 IFT43Q96FT9 208 aa5.37□□□□□ -1.55
PTPRC-205ENST00000391970 DNMT3LQ9UJW3 386 aa5.37□□□□□ -1.55
PTPRC-205ENST00000391970 BRPF3Q9ULD4 1205 aa5.37□□□□□ -1.55
PTPRC-205ENST00000391970 BCS1LQ9Y276 419 aa5.37□□□□□ -1.55
PTPRC-205ENST00000391970 FIGNL2A6NMB9 653 aa5.36□□□□□ -1.55
PTPRC-205ENST00000391970 ZAP70P43403 619 aa5.36□□□□□ -1.55
PTPRC-205ENST00000391970 HIF1AQ16665 826 aa5.36□□□□□ -1.55
PTPRC-205ENST00000391970 IER5Q5VY09 327 aa5.36□□□□□ -1.55
PTPRC-205ENST00000391970 ATCAYQ86WG3 371 aa5.36□□□□□ -1.55
PTPRC-205ENST00000391970 CITED4Q96RK1 184 aa5.36□□□□□ -1.55
PTPRC-205ENST00000391970 TIMMDC1Q9NPL8 285 aa5.36□□□□□ -1.55
PTPRC-205ENST00000391970 ATP13A2Q9NQ11 1180 aa5.36□□□□□ -1.55
PTPRC-205ENST00000391970 AAASQ9NRG9 546 aa5.36□□□□□ -1.55
PTPRC-205ENST00000391970 CCDC87Q9NVE4 849 aa5.36□□□□□ -1.55
PTPRC-205ENST00000391970 RBM47A0AV96 593 aaKnown RBP5.35□□□□□ -1.55
PTPRC-205ENST00000391970 ST8SIA5O15466 376 aa5.35□□□□□ -1.55
PTPRC-205ENST00000391970 MSX1P28360 303 aa5.35□□□□□ -1.55
PTPRC-205ENST00000391970 AAMPQ13685 434 aa5.35□□□□□ -1.55
PTPRC-205ENST00000391970 BICDL1Q6ZP65 573 aa5.35□□□□□ -1.55
PTPRC-205ENST00000391970 TMC7Q7Z402 723 aa5.35□□□□□ -1.55
PTPRC-205ENST00000391970 TREML1Q86YW5 311 aa5.35□□□□□ -1.55
PTPRC-205ENST00000391970 ZNF428Q96B54 188 aa5.35□□□□□ -1.55
PTPRC-205ENST00000391970 HSH2DQ96JZ2 352 aa5.35□□□□□ -1.55
PTPRC-205ENST00000391970 SUSD3Q96L08 255 aa5.35□□□□□ -1.55
PTPRC-205ENST00000391970 MICAL2O94851 1124 aa5.34□□□□□ -1.55
PTPRC-205ENST00000391970 IGHA2P01877 340 aa5.34□□□□□ -1.55
PTPRC-205ENST00000391970 MZF1P28698 734 aaPredicted RBP5.34□□□□□ -1.55
PTPRC-205ENST00000391970 RBM25P49756 843 aaKnown RBP5.34□□□□□ -1.55
PTPRC-205ENST00000391970 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.34□□□□□ -1.55
PTPRC-205ENST00000391970 ZNF280CQ8ND82 737 aa5.34□□□□□ -1.55
PTPRC-205ENST00000391970 EDEM1Q92611 657 aa5.34□□□□□ -1.55
PTPRC-205ENST00000391970 ZIC5Q96T25 663 aa5.34□□□□□ -1.55
PTPRC-205ENST00000391970 FAM129BQ96TA1 746 aa5.34□□□□□ -1.55
PTPRC-205ENST00000391970 BCL2L13Q9BXK5 485 aa5.34□□□□□ -1.55
PTPRC-205ENST00000391970 CRISPLD1Q9H336 500 aa5.34□□□□□ -1.55
PTPRC-205ENST00000391970 DMGDHQ9UI17 866 aaKnown RBP5.34□□□□□ -1.55
PTPRC-205ENST00000391970 POLIQ9UNA4 740 aa5.34□□□□□ -1.55
PTPRC-205ENST00000391970 DYRK1BQ9Y463 629 aa5.34□□□□□ -1.55
PTPRC-205ENST00000391970 A0A1W2PNR3 127 aa5.33□□□□□ -1.56
PTPRC-205ENST00000391970 TREHO43280 583 aa5.33□□□□□ -1.56
PTPRC-205ENST00000391970 MAN1A2O60476 641 aa5.33□□□□□ -1.56
PTPRC-205ENST00000391970 PDGFAP04085 211 aa5.33□□□□□ -1.56
PTPRC-205ENST00000391970 DNM1Q05193 864 aaKnown RBP5.33□□□□□ -1.56
PTPRC-205ENST00000391970 COL19A1Q14993 1142 aa5.33□□□□□ -1.56
PTPRC-205ENST00000391970 ARSJQ5FYB0 599 aaPredicted RBP5.33□□□□□ -1.56
PTPRC-205ENST00000391970 FBXO33Q7Z6M2 555 aa5.33□□□□□ -1.56
PTPRC-205ENST00000391970 GJD3Q8N144 294 aa5.33□□□□□ -1.56
PTPRC-205ENST00000391970 DMRTB1Q96MA1 342 aa5.33□□□□□ -1.56
PTPRC-205ENST00000391970 ANKIB1Q9P2G1 1089 aa5.33□□□□□ -1.56
PTPRC-205ENST00000391970 DACH1Q9UI36 760 aa5.33□□□□□ -1.56
PTPRC-205ENST00000391970 SENP3-EIF4A1A0A087X0R7 540 aa5.32□□□□□ -1.56
PTPRC-205ENST00000391970 OPLAHO14841 1288 aa5.32□□□□□ -1.56
PTPRC-205ENST00000391970 GPR182O15218 404 aa5.32□□□□□ -1.56
PTPRC-205ENST00000391970 F11P03951 625 aa5.32□□□□□ -1.56
PTPRC-205ENST00000391970 USP5P45974 858 aa5.32□□□□□ -1.56
PTPRC-205ENST00000391970 RANGAP1P46060 587 aaPredicted RBP5.32□□□□□ -1.56
PTPRC-205ENST00000391970 IDH3AP50213 366 aa5.32□□□□□ -1.56
PTPRC-205ENST00000391970 FMR1Q06787 632 aaKnown RBP eCLIP5.32□□□□□ -1.56
PTPRC-205ENST00000391970 PDE3BQ13370 1112 aa5.32□□□□□ -1.56
PTPRC-205ENST00000391970 DSC3Q14574 896 aa5.32□□□□□ -1.56
PTPRC-205ENST00000391970 LRRC69Q6ZNQ3 347 aa5.32□□□□□ -1.56
PTPRC-205ENST00000391970 BTLAQ7Z6A9 289 aa5.32□□□□□ -1.56
PTPRC-205ENST00000391970 TMC1Q8TDI8 760 aa5.32□□□□□ -1.56
PTPRC-205ENST00000391970 GPR152Q8TDT2 470 aa5.32□□□□□ -1.56
PTPRC-205ENST00000391970 RUBCNLQ9H714 662 aa5.32□□□□□ -1.56
PTPRC-205ENST00000391970 GPAMQ9HCL2 828 aa5.32□□□□□ -1.56
PTPRC-205ENST00000391970 FAM13BQ9NYF5 915 aa5.32□□□□□ -1.56
PTPRC-205ENST00000391970 SOBPA7XYQ1 873 aa5.31□□□□□ -1.56
PTPRC-205ENST00000391970 P4HBP07237 508 aaKnown RBP5.31□□□□□ -1.56
PTPRC-205ENST00000391970 ZNF16P17020 682 aaPredicted RBP5.31□□□□□ -1.56
PTPRC-205ENST00000391970 INPP5BP32019 993 aa5.31□□□□□ -1.56
PTPRC-205ENST00000391970 ARSDP51689 593 aa5.31□□□□□ -1.56
PTPRC-205ENST00000391970 TYRO3Q06418 890 aa5.31□□□□□ -1.56
PTPRC-205ENST00000391970 GIPC2Q8TF65 315 aa5.31□□□□□ -1.56
PTPRC-205ENST00000391970 ALKBH8Q96BT7 664 aaKnown RBP5.31□□□□□ -1.56
PTPRC-205ENST00000391970 NUDT16Q96DE0 195 aaKnown RBP5.31□□□□□ -1.56
PTPRC-205ENST00000391970 NEUROD4Q9HD90 331 aa5.31□□□□□ -1.56
PTPRC-205ENST00000391970 SLC35F4A4IF30 521 aa5.3□□□□□ -1.56
PTPRC-205ENST00000391970 UNCXA6NJT0 531 aa5.3□□□□□ -1.56
PTPRC-205ENST00000391970 PCSK2P16519 638 aa5.3□□□□□ -1.56
PTPRC-205ENST00000391970 PTSQ03393 145 aa5.3□□□□□ -1.56
PTPRC-205ENST00000391970 LBRQ14739 615 aaKnown RBP5.3□□□□□ -1.56
PTPRC-205ENST00000391970 SAMD5Q5TGI4 173 aa5.3□□□□□ -1.56
PTPRC-205ENST00000391970 NLRP8Q86W28 1048 aa5.3□□□□□ -1.56
PTPRC-205ENST00000391970 PGBD3Q8N328 593 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms