RNA–Protein interactions for RNA: ENST00000389759.7

PKP4-202, Transcript of plakophilin 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PKP4, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-202ENST00000389759 TUBB4AP04350 444 aa10.04□□□□□ -0.8
PKP4-202ENST00000389759 RHPN1Q8TCX5 695 aa10.04□□□□□ -0.8
PKP4-202ENST00000389759 RAI14Q9P0K7 980 aa10.04□□□□□ -0.8
PKP4-202ENST00000389759 HMG20BQ9P0W2 317 aa10.04□□□□□ -0.8
PKP4-202ENST00000389759 ZFYVE27Q5T4F4 411 aa10.03□□□□□ -0.8
PKP4-202ENST00000389759 CCDC43Q96MW1 224 aaKnown RBP10.03□□□□□ -0.8
PKP4-202ENST00000389759 NEK1Q96PY6 1258 aa10.03□□□□□ -0.8
PKP4-202ENST00000389759 SRRTQ9BXP5 876 aaKnown RBP10.03□□□□□ -0.8
PKP4-202ENST00000389759 SPA17Q15506 151 aa10.03□□□□□ -0.8
PKP4-202ENST00000389759 ANKRD36BQ8N2N9 1353 aa10.03□□□□□ -0.8
PKP4-202ENST00000389759 PLB1Q6P1J6 1458 aa10.03□□□□□ -0.8
PKP4-202ENST00000389759 WAPLQ7Z5K2 1190 aa10.03□□□□□ -0.8
PKP4-202ENST00000389759 TATP17735 454 aaPredicted RBP10.02□□□□□ -0.8
PKP4-202ENST00000389759 LARP1Q6PKG0 1096 aaKnown RBP10.02□□□□□ -0.8
PKP4-202ENST00000389759 TAX1BP1Q86VP1 789 aa10.02□□□□□ -0.8
PKP4-202ENST00000389759 KRT18P05783 430 aaKnown RBP10.02□□□□□ -0.81
PKP4-202ENST00000389759 TDO2P48775 406 aa10.02□□□□□ -0.81
PKP4-202ENST00000389759 UBASH3AP57075 661 aa10.02□□□□□ -0.81
PKP4-202ENST00000389759 TAF4BQ92750 862 aa10.02□□□□□ -0.81
PKP4-202ENST00000389759 TCEANC2Q96MN5 208 aa10.02□□□□□ -0.81
PKP4-202ENST00000389759 C14orf93Q9H972 538 aaKnown RBP10.02□□□□□ -0.81
PKP4-202ENST00000389759 IDH1O75874 414 aaKnown RBP10.02□□□□□ -0.81
PKP4-202ENST00000389759 C8orf58Q8NAV2 365 aa10.02□□□□□ -0.81
PKP4-202ENST00000389759 NUP160Q12769 1436 aa10.02□□□□□ -0.81
PKP4-202ENST00000389759 GOLGA8BA8MQT2 603 aa10.02□□□□□ -0.81
PKP4-202ENST00000389759 VAMP4O75379 141 aa10.02□□□□□ -0.81
PKP4-202ENST00000389759 IVLP07476 585 aa10.02□□□□□ -0.81
PKP4-202ENST00000389759 PAFAH1B1P43034 410 aa10.02□□□□□ -0.81
PKP4-202ENST00000389759 MCM6Q14566 821 aa10.02□□□□□ -0.81
PKP4-202ENST00000389759 ISM2Q6H9L7 571 aa10.02□□□□□ -0.81
PKP4-202ENST00000389759 ORC3Q9UBD5 711 aaPredicted RBP10.02□□□□□ -0.81
PKP4-202ENST00000389759 POLR3DP05423 398 aaPredicted RBP10.01□□□□□ -0.81
PKP4-202ENST00000389759 CCDC102BQ68D86 513 aa10.01□□□□□ -0.81
PKP4-202ENST00000389759 KIF6Q6ZMV9 814 aa10.01□□□□□ -0.81
PKP4-202ENST00000389759 AOPEPQ8N6M6 819 aa10.01□□□□□ -0.81
PKP4-202ENST00000389759 BRF1Q92994 677 aa10.01□□□□□ -0.81
PKP4-202ENST00000389759 PPP1R9BQ96SB3 815 aa10.01□□□□□ -0.81
PKP4-202ENST00000389759 NUP88Q99567 741 aaPredicted RBP10.01□□□□□ -0.81
PKP4-202ENST00000389759 YEATS4O95619 227 aa10.01□□□□□ -0.81
PKP4-202ENST00000389759 IFIT1P09914 478 aaKnown RBP10.01□□□□□ -0.81
PKP4-202ENST00000389759 SYT1P21579 422 aa10.01□□□□□ -0.81
PKP4-202ENST00000389759 CTR9Q6PD62 1173 aa10.01□□□□□ -0.81
PKP4-202ENST00000389759 LMBRD1Q9NUN5 540 aa10.01□□□□□ -0.81
PKP4-202ENST00000389759 UGGT2Q9NYU1 1516 aa10.01□□□□□ -0.81
PKP4-202ENST00000389759 RIOK3O14730 519 aaKnown RBP10.01□□□□□ -0.81
PKP4-202ENST00000389759 CEP85Q6P2H3 762 aa10.01□□□□□ -0.81
PKP4-202ENST00000389759 MICALCLQ6ZW33 695 aa10.01□□□□□ -0.81
PKP4-202ENST00000389759 LUZP1Q86V48 1076 aa10.01□□□□□ -0.81
PKP4-202ENST00000389759 RBM8AQ9Y5S9 174 aaKnown RBP10.01□□□□□ -0.81
PKP4-202ENST00000389759 USP16Q9Y5T5 823 aa10.01□□□□□ -0.81
PKP4-202ENST00000389759 INSRP06213 1382 aa10.01□□□□□ -0.81
PKP4-202ENST00000389759 SNAPC4Q5SXM2 1469 aa10.01□□□□□ -0.81
PKP4-202ENST00000389759 AK2P54819 239 aa10□□□□□ -0.81
PKP4-202ENST00000389759 GPATCH11Q8N954 259 aa10□□□□□ -0.81
PKP4-202ENST00000389759 MRPS27Q92552 414 aaKnown RBP10□□□□□ -0.81
PKP4-202ENST00000389759 DBF4Q9UBU7 674 aaPredicted RBP10□□□□□ -0.81
PKP4-202ENST00000389759 CUL7Q14999 1698 aa10□□□□□ -0.81
PKP4-202ENST00000389759 CCDC196A0A1B0GTZ2 297 aa10□□□□□ -0.81
PKP4-202ENST00000389759 DHX37Q8IY37 1157 aaKnown RBP10□□□□□ -0.81
PKP4-202ENST00000389759 IPO4Q8TEX9 1081 aaKnown RBP10□□□□□ -0.81
PKP4-202ENST00000389759 AIDAQ96BJ3 306 aa10□□□□□ -0.81
PKP4-202ENST00000389759 ZFP91Q96JP5 570 aaPredicted RBP10□□□□□ -0.81
PKP4-202ENST00000389759 FAM135AQ9P2D6 1515 aa10□□□□□ -0.81
PKP4-202ENST00000389759 ZBTB7BO15156 539 aaPredicted RBP10□□□□□ -0.81
PKP4-202ENST00000389759 ZNF500O60304 480 aaPredicted RBP10□□□□□ -0.81
PKP4-202ENST00000389759 PPFIA3O75145 1194 aa10□□□□□ -0.81
PKP4-202ENST00000389759 U2AF2P26368 475 aaKnown RBP eCLIP10□□□□□ -0.813e-7■■■■□ 21.5
PKP4-202ENST00000389759 MNAT1P51948 309 aa10□□□□□ -0.81
PKP4-202ENST00000389759 SYCP1Q15431 976 aa10□□□□□ -0.81
PKP4-202ENST00000389759 ESCO1Q5FWF5 840 aa10□□□□□ -0.81
PKP4-202ENST00000389759 FSD2A1L4K1 749 aa10□□□□□ -0.81
PKP4-202ENST00000389759 RNF187Q5TA31 235 aaPredicted RBP10□□□□□ -0.81
PKP4-202ENST00000389759 PI4KAP2A4QPH2 592 aa9.99□□□□□ -0.81
PKP4-202ENST00000389759 ZNF213O14771 459 aa9.99□□□□□ -0.81
PKP4-202ENST00000389759 USO1O60763 962 aaKnown RBP9.99□□□□□ -0.81
PKP4-202ENST00000389759 NEFHP12036 1026 aa9.99□□□□□ -0.81
PKP4-202ENST00000389759 IBSPP21815 317 aaPredicted RBP9.99□□□□□ -0.81
PKP4-202ENST00000389759 SYKP43405 635 aa9.99□□□□□ -0.81
PKP4-202ENST00000389759 CABP4P57796 275 aa9.99□□□□□ -0.81
PKP4-202ENST00000389759 ATP8B2P98198 1209 aa9.99□□□□□ -0.81
PKP4-202ENST00000389759 TSPYL6Q8N831 410 aa9.99□□□□□ -0.81
PKP4-202ENST00000389759 PI4KAP1Q8N8J0 262 aa9.99□□□□□ -0.81
PKP4-202ENST00000389759 KCNG4Q8TDN1 519 aa9.99□□□□□ -0.81
PKP4-202ENST00000389759 RBM33Q96EV2 1170 aaKnown RBP9.99□□□□□ -0.81
PKP4-202ENST00000389759 CARD14Q9BXL6 1004 aa9.99□□□□□ -0.81
PKP4-202ENST00000389759 BMP2KQ9NSY1 1161 aaPredicted RBP9.99□□□□□ -0.81
PKP4-202ENST00000389759 GNL3LQ9NVN8 582 aaKnown RBP9.99□□□□□ -0.81
PKP4-202ENST00000389759 GPATCH8Q9UKJ3 1502 aaKnown RBP9.99□□□□□ -0.81
PKP4-202ENST00000389759 CAPN2P17655 700 aa9.99□□□□□ -0.81
PKP4-202ENST00000389759 ERO1AQ96HE7 468 aa9.99□□□□□ -0.81
PKP4-202ENST00000389759 ZHX3Q9H4I2 956 aa9.99□□□□□ -0.81
PKP4-202ENST00000389759 NOS1P29475 1434 aa9.99□□□□□ -0.81
PKP4-202ENST00000389759 CHMLP26374 656 aa9.99□□□□□ -0.81
PKP4-202ENST00000389759 GTF2A1P52655 376 aaPredicted RBP9.99□□□□□ -0.81
PKP4-202ENST00000389759 GABPB1Q06547 395 aaPredicted RBP9.99□□□□□ -0.81
PKP4-202ENST00000389759 GAS2L3Q86XJ1 694 aa9.99□□□□□ -0.81
PKP4-202ENST00000389759 C17orf53Q8N3J3 647 aaPredicted RBP9.99□□□□□ -0.81
PKP4-202ENST00000389759 TMEM63CQ9P1W3 806 aa9.99□□□□□ -0.81
PKP4-202ENST00000389759 DMRT2Q9Y5R5 561 aa9.99□□□□□ -0.81
PKP4-202ENST00000389759 PIK3R4Q99570 1358 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms