RNA–Protein interactions for RNA: ENST00000382438.5

NKX3-2-201, Transcript of NK3 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX3-2, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2-201ENST00000382438 CT47A1Q5JQC4 288 aaPredicted RBP24.73■■□□□ 1.55
NKX3-2-201ENST00000382438 A0A087WWV3 80 aa24.73■■□□□ 1.55
NKX3-2-201ENST00000382438 HSPA4P34932 840 aa24.73■■□□□ 1.55
NKX3-2-201ENST00000382438 RASEFQ8IZ41 740 aa24.73■■□□□ 1.55
NKX3-2-201ENST00000382438 ORC3Q9UBD5 711 aaPredicted RBP24.73■■□□□ 1.55
NKX3-2-201ENST00000382438 CLGNO14967 610 aa24.72■■□□□ 1.55
NKX3-2-201ENST00000382438 TSGA10IPQ3SY00 556 aa24.72■■□□□ 1.55
NKX3-2-201ENST00000382438 GOLGA6L1Q8N7Z2 621 aa24.72■■□□□ 1.55
NKX3-2-201ENST00000382438 SBNO2Q9Y2G9 1366 aa24.72■■□□□ 1.55
NKX3-2-201ENST00000382438 ANKRD65E5RJM6 399 aa24.72■■□□□ 1.55
NKX3-2-201ENST00000382438 MAP4K4O95819 1239 aaPredicted RBP24.72■■□□□ 1.55
NKX3-2-201ENST00000382438 SAFB2Q14151 953 aaKnown RBP eCLIP24.72■■□□□ 1.55
NKX3-2-201ENST00000382438 CCDC93Q567U6 631 aa24.72■■□□□ 1.55
NKX3-2-201ENST00000382438 MSH6P52701 1360 aa24.72■■□□□ 1.55
NKX3-2-201ENST00000382438 NEMFO60524 1076 aa24.71■■□□□ 1.55
NKX3-2-201ENST00000382438 NR1I2O75469 434 aa24.71■■□□□ 1.55
NKX3-2-201ENST00000382438 GOLGA5Q8TBA6 731 aa24.71■■□□□ 1.55
NKX3-2-201ENST00000382438 TTC14Q96N46 770 aa24.71■■□□□ 1.55
NKX3-2-201ENST00000382438 CDC42BPBQ9Y5S2 1711 aa24.71■■□□□ 1.55
NKX3-2-201ENST00000382438 TTC31Q49AM3 519 aaPredicted RBP24.71■■□□□ 1.55
NKX3-2-201ENST00000382438 SNX14Q9Y5W7 946 aa24.71■■□□□ 1.55
NKX3-2-201ENST00000382438 A0A1B0GUL7 405 aa24.71■■□□□ 1.55
NKX3-2-201ENST00000382438 CDC25BP30305 580 aa24.71■■□□□ 1.55
NKX3-2-201ENST00000382438 KRT85P78386 507 aa24.71■■□□□ 1.55
NKX3-2-201ENST00000382438 E4F1Q66K89 784 aaPredicted RBP24.7■■□□□ 1.54
NKX3-2-201ENST00000382438 DDX54Q8TDD1 881 aaKnown RBP24.7■■□□□ 1.54
NKX3-2-201ENST00000382438 ABCA6Q8N139 1617 aa24.7■■□□□ 1.54
NKX3-2-201ENST00000382438 TBC1D8O95759 1140 aa24.7■■□□□ 1.54
NKX3-2-201ENST00000382438 ADAM21Q9UKJ8 722 aa24.7■■□□□ 1.54
NKX3-2-201ENST00000382438 FAM135BQ49AJ0 1406 aa24.69■■□□□ 1.54
NKX3-2-201ENST00000382438 CHGAP10645 457 aaKnown RBP24.69■■□□□ 1.54
NKX3-2-201ENST00000382438 C11orf57Q6ZUT1 292 aaPredicted RBP24.69■■□□□ 1.54
NKX3-2-201ENST00000382438 AATKQ6ZMQ8 1374 aa24.69■■□□□ 1.54
NKX3-2-201ENST00000382438 ABCA8O94911 1581 aa24.69■■□□□ 1.54
NKX3-2-201ENST00000382438 FOXR1Q6PIV2 292 aa24.69■■□□□ 1.54
NKX3-2-201ENST00000382438 UBXN6Q9BZV1 441 aa24.69■■□□□ 1.54
NKX3-2-201ENST00000382438 BRMS1Q9HCU9 246 aa24.69■■□□□ 1.54
NKX3-2-201ENST00000382438 COL3A1P02461 1466 aaPredicted RBP24.68■■□□□ 1.54
NKX3-2-201ENST00000382438 FAM83GA6ND36 823 aa24.68■■□□□ 1.54
NKX3-2-201ENST00000382438 NECAB1Q8N987 351 aa24.68■■□□□ 1.54
NKX3-2-201ENST00000382438 PPP1R13BQ96KQ4 1090 aa24.68■■□□□ 1.54
NKX3-2-201ENST00000382438 FCHSD2O94868 740 aa24.68■■□□□ 1.54
NKX3-2-201ENST00000382438 DCTN1Q14203 1278 aa24.68■■□□□ 1.54
NKX3-2-201ENST00000382438 TRPM2O94759 1503 aa24.68■■□□□ 1.54
NKX3-2-201ENST00000382438 CDC37L1Q7L3B6 337 aa24.67■■□□□ 1.54
NKX3-2-201ENST00000382438 AK7Q96M32 723 aa24.67■■□□□ 1.54
NKX3-2-201ENST00000382438 CLSTN2Q9H4D0 955 aa24.67■■□□□ 1.54
NKX3-2-201ENST00000382438 BANK1Q8NDB2 785 aa24.67■■□□□ 1.54
NKX3-2-201ENST00000382438 JPH4Q96JJ6 628 aa24.67■■□□□ 1.54
NKX3-2-201ENST00000382438 CARMIL2Q6F5E8 1435 aa24.67■■□□□ 1.54
NKX3-2-201ENST00000382438 KIF2AO00139 706 aaPredicted RBP24.67■■□□□ 1.54
NKX3-2-201ENST00000382438 IQCB1Q15051 598 aa24.67■■□□□ 1.54
NKX3-2-201ENST00000382438 NFE2L2Q16236 605 aa24.67■■□□□ 1.54
NKX3-2-201ENST00000382438 FBXW7Q969H0 707 aa24.67■■□□□ 1.54
NKX3-2-201ENST00000382438 MRFAP1L1Q96HT8 127 aa24.67■■□□□ 1.54
NKX3-2-201ENST00000382438 HOMER1Q86YM7 354 aa24.66■■□□□ 1.54
NKX3-2-201ENST00000382438 PLEKHG2Q9H7P9 1386 aa24.66■■□□□ 1.54
NKX3-2-201ENST00000382438 LARP1BQ659C4 914 aaKnown RBP24.66■■□□□ 1.54
NKX3-2-201ENST00000382438 MNS1Q8NEH6 495 aa24.66■■□□□ 1.54
NKX3-2-201ENST00000382438 BICD2Q8TD16 824 aa24.66■■□□□ 1.54
NKX3-2-201ENST00000382438 DNAI1Q9UI46 699 aa24.66■■□□□ 1.54
NKX3-2-201ENST00000382438 ELP1O95163 1332 aa24.66■■□□□ 1.54
NKX3-2-201ENST00000382438 HMMRO75330 724 aa24.65■■□□□ 1.54
NKX3-2-201ENST00000382438 ACTN2P35609 894 aa24.65■■□□□ 1.54
NKX3-2-201ENST00000382438 SPATA32Q96LK8 384 aa24.65■■□□□ 1.54
NKX3-2-201ENST00000382438 CARD6Q9BX69 1037 aa24.65■■□□□ 1.54
NKX3-2-201ENST00000382438 NSD2O96028 1365 aa24.65■■□□□ 1.54
NKX3-2-201ENST00000382438 ARHGAP5Q13017 1502 aa24.64■■□□□ 1.54
NKX3-2-201ENST00000382438 SLC4A10Q6U841 1118 aa24.64■■□□□ 1.54
NKX3-2-201ENST00000382438 DDX19AQ9NUU7 478 aaKnown RBP24.64■■□□□ 1.54
NKX3-2-201ENST00000382438 ZNF853P0CG23 659 aa24.64■■□□□ 1.53
NKX3-2-201ENST00000382438 STAG3Q9UJ98 1225 aa24.64■■□□□ 1.53
NKX3-2-201ENST00000382438 BECN2A8MW95 431 aa24.63■■□□□ 1.53
NKX3-2-201ENST00000382438 GNAI3P08754 354 aa24.63■■□□□ 1.53
NKX3-2-201ENST00000382438 ATP2B1P20020 1258 aa24.63■■□□□ 1.53
NKX3-2-201ENST00000382438 NOM1Q5C9Z4 860 aaKnown RBP24.63■■□□□ 1.53
NKX3-2-201ENST00000382438 KIF24Q5T7B8 1368 aa24.63■■□□□ 1.53
NKX3-2-201ENST00000382438 UGGT1Q9NYU2 1555 aa24.63■■□□□ 1.53
NKX3-2-201ENST00000382438 KIAA1210Q9ULL0 1709 aa24.63■■□□□ 1.53
NKX3-2-201ENST00000382438 FYB1O15117 783 aa24.63■■□□□ 1.53
NKX3-2-201ENST00000382438 IFIT2P09913 472 aaKnown RBP24.63■■□□□ 1.53
NKX3-2-201ENST00000382438 IL17RAQ96F46 866 aa24.63■■□□□ 1.53
NKX3-2-201ENST00000382438 SENP3Q9H4L4 574 aaPredicted RBP24.63■■□□□ 1.53
NKX3-2-201ENST00000382438 CC2D1AQ6P1N0 951 aaPredicted RBP24.62■■□□□ 1.53
NKX3-2-201ENST00000382438 RBM43Q6ZSC3 357 aaKnown RBP24.62■■□□□ 1.53
NKX3-2-201ENST00000382438 DEF6Q9H4E7 631 aa24.62■■□□□ 1.53
NKX3-2-201ENST00000382438 SALL3Q9BXA9 1300 aa24.62■■□□□ 1.53
NKX3-2-201ENST00000382438 URI1O94763 535 aaPredicted RBP24.62■■□□□ 1.53
NKX3-2-201ENST00000382438 MAGEA9P43362 315 aa24.62■■□□□ 1.53
NKX3-2-201ENST00000382438 ST3GAL1Q11201 340 aa24.62■■□□□ 1.53
NKX3-2-201ENST00000382438 SARM1Q6SZW1 724 aa24.62■■□□□ 1.53
NKX3-2-201ENST00000382438 HYPKQ9NX55 129 aa24.62■■□□□ 1.53
NKX3-2-201ENST00000382438 MAP3K4Q9Y6R4 1608 aa24.62■■□□□ 1.53
NKX3-2-201ENST00000382438 LRRCC1Q9C099 1032 aa24.62■■□□□ 1.53
NKX3-2-201ENST00000382438 EIF3CLB5ME19 914 aaKnown RBP24.61■■□□□ 1.53
NKX3-2-201ENST00000382438 H3BQF6 201 aa24.61■■□□□ 1.53
NKX3-2-201ENST00000382438 EIF3CQ99613 913 aaKnown RBP24.61■■□□□ 1.53
NKX3-2-201ENST00000382438 EXOC4Q96A65 974 aa24.61■■□□□ 1.53
NKX3-2-201ENST00000382438 SPG7Q9UQ90 795 aa24.61■■□□□ 1.53
NKX3-2-201ENST00000382438 GNL2Q13823 731 aaKnown RBP24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms