RNA–Protein interactions for RNA: ENST00000380535.8

TNFSF13-203, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-203ENST00000380535 FNBP4Q8N3X1 1017 aaPredicted RBP17.13■□□□□ 0.33
TNFSF13-203ENST00000380535 ARFGEF2Q9Y6D5 1785 aa17.13■□□□□ 0.33
TNFSF13-203ENST00000380535 ANXA1P04083 346 aa17.12■□□□□ 0.33
TNFSF13-203ENST00000380535 ANKRD13DQ6ZTN6 518 aa17.12■□□□□ 0.33
TNFSF13-203ENST00000380535 XAGE3Q8WTP9 111 aa17.12■□□□□ 0.33
TNFSF13-203ENST00000380535 METTL22Q9BUU2 404 aaPredicted RBP17.12■□□□□ 0.33
TNFSF13-203ENST00000380535 COPS6Q7L5N1 327 aa17.12■□□□□ 0.33
TNFSF13-203ENST00000380535 LRP10Q7Z4F1 713 aa17.12■□□□□ 0.33
TNFSF13-203ENST00000380535 PLBD2Q8NHP8 589 aa17.12■□□□□ 0.33
TNFSF13-203ENST00000380535 NGLY1Q96IV0 654 aa17.12■□□□□ 0.33
TNFSF13-203ENST00000380535 C9orf78Q9NZ63 289 aaPredicted RBP17.12■□□□□ 0.33
TNFSF13-203ENST00000380535 LRRFIP2Q9Y608 721 aaKnown RBP17.12■□□□□ 0.33
TNFSF13-203ENST00000380535 HSP90AB4PQ58FF6 505 aa17.11■□□□□ 0.33
TNFSF13-203ENST00000380535 PIGBQ92521 554 aa17.11■□□□□ 0.33
TNFSF13-203ENST00000380535 LNPKQ9C0E8 428 aa17.11■□□□□ 0.33
TNFSF13-203ENST00000380535 CICQ96RK0 1608 aaPredicted RBP17.11■□□□□ 0.33
TNFSF13-203ENST00000380535 SEC24BO95487 1268 aa17.11■□□□□ 0.33
TNFSF13-203ENST00000380535 STARD3NLO95772 234 aa17.11■□□□□ 0.33
TNFSF13-203ENST00000380535 MYL6BP14649 208 aa17.11■□□□□ 0.33
TNFSF13-203ENST00000380535 MTX1Q13505 466 aa17.11■□□□□ 0.33
TNFSF13-203ENST00000380535 SSH3Q8TE77 659 aa17.11■□□□□ 0.33
TNFSF13-203ENST00000380535 CCDC9Q9Y3X0 531 aaKnown RBP17.11■□□□□ 0.33
TNFSF13-203ENST00000380535 COL15A1P39059 1388 aa17.1■□□□□ 0.33
TNFSF13-203ENST00000380535 RAB11FIP3O75154 756 aa17.1■□□□□ 0.33
TNFSF13-203ENST00000380535 BMP2KLQ5H9B9 411 aa17.1■□□□□ 0.33
TNFSF13-203ENST00000380535 BCL9LQ86UU0 1499 aa17.1■□□□□ 0.33
TNFSF13-203ENST00000380535 AIMP1Q12904 312 aaKnown RBP17.09■□□□□ 0.33
TNFSF13-203ENST00000380535 NUP188Q5SRE5 1749 aa17.09■□□□□ 0.33
TNFSF13-203ENST00000380535 GRM8O00222 908 aa17.09■□□□□ 0.33
TNFSF13-203ENST00000380535 ATG3Q9NT62 314 aa17.09■□□□□ 0.33
TNFSF13-203ENST00000380535 AFDNP55196 1824 aaKnown RBP17.09■□□□□ 0.33
TNFSF13-203ENST00000380535 POLA2Q14181 598 aa17.08■□□□□ 0.33
TNFSF13-203ENST00000380535 UPF2Q9HAU5 1272 aaKnown RBP17.08■□□□□ 0.33
TNFSF13-203ENST00000380535 PTCD1O75127 700 aaKnown RBP17.08■□□□□ 0.32
TNFSF13-203ENST00000380535 HMGB1P09429 215 aaKnown RBP17.08■□□□□ 0.32
TNFSF13-203ENST00000380535 C8orf37Q96NL8 207 aa17.08■□□□□ 0.32
TNFSF13-203ENST00000380535 ZNF831Q5JPB2 1677 aa17.07■□□□□ 0.32
TNFSF13-203ENST00000380535 PLCB2Q00722 1185 aa17.07■□□□□ 0.32
TNFSF13-203ENST00000380535 NEURL1BA8MQ27 555 aa17.06■□□□□ 0.32
TNFSF13-203ENST00000380535 LRRCC1Q9C099 1032 aa17.06■□□□□ 0.32
TNFSF13-203ENST00000380535 NBPF7P0C2Y1 421 aaPredicted RBP17.06■□□□□ 0.32
TNFSF13-203ENST00000380535 SMARCC1Q92922 1105 aaPredicted RBP17.06■□□□□ 0.32
TNFSF13-203ENST00000380535 GCKRQ14397 625 aa17.05■□□□□ 0.32
TNFSF13-203ENST00000380535 ASAP1Q9ULH1 1129 aa17.05■□□□□ 0.32
TNFSF13-203ENST00000380535 NBPF26B4DH59 902 aa17.05■□□□□ 0.32
TNFSF13-203ENST00000380535 NBPF14Q5TI25 921 aa17.05■□□□□ 0.32
TNFSF13-203ENST00000380535 NBPF10Q6P3W6 841 aaKnown RBP17.05■□□□□ 0.32
TNFSF13-203ENST00000380535 NBPF15Q8N660 670 aa17.05■□□□□ 0.32
TNFSF13-203ENST00000380535 MYD88Q99836 296 aa17.05■□□□□ 0.32
TNFSF13-203ENST00000380535 USP21Q9UK80 565 aa17.05■□□□□ 0.32
TNFSF13-203ENST00000380535 THSD7AQ9UPZ6 1657 aa17.05■□□□□ 0.32
TNFSF13-203ENST00000380535 PPP1R42Q7Z4L9 355 aa17.04■□□□□ 0.32
TNFSF13-203ENST00000380535 ERC1Q8IUD2 1116 aa17.04■□□□□ 0.32
TNFSF13-203ENST00000380535 TJP1Q07157 1748 aa17.04■□□□□ 0.32
TNFSF13-203ENST00000380535 PNMA6EA0A0J9YXQ4 647 aa17.04■□□□□ 0.32
TNFSF13-203ENST00000380535 IGKV5-2P06315 115 aa17.04■□□□□ 0.32
TNFSF13-203ENST00000380535 RBM42Q9BTD8 480 aaKnown RBP17.04■□□□□ 0.32
TNFSF13-203ENST00000380535 OSBPL3Q9H4L5 887 aa17.04■□□□□ 0.32
TNFSF13-203ENST00000380535 SRGAP3O43295 1099 aa17.03■□□□□ 0.32
TNFSF13-203ENST00000380535 PRIM1P49642 420 aaKnown RBP17.03■□□□□ 0.32
TNFSF13-203ENST00000380535 CWF19L2Q2TBE0 894 aaKnown RBP17.03■□□□□ 0.32
TNFSF13-203ENST00000380535 MEX3CQ5U5Q3 659 aaKnown RBP17.03■□□□□ 0.32
TNFSF13-203ENST00000380535 KIF6Q6ZMV9 814 aa17.03■□□□□ 0.32
TNFSF13-203ENST00000380535 PLEKHM2Q8IWE5 1019 aa17.03■□□□□ 0.32
TNFSF13-203ENST00000380535 MARCH10Q8NA82 808 aaPredicted RBP17.03■□□□□ 0.32
TNFSF13-203ENST00000380535 AOX1Q06278 1338 aa17.02■□□□□ 0.32
TNFSF13-203ENST00000380535 SLC4A3P48751 1232 aa17.02■□□□□ 0.32
TNFSF13-203ENST00000380535 NAP1L2Q9ULW6 460 aaPredicted RBP17.02■□□□□ 0.32
TNFSF13-203ENST00000380535 SYTL4Q96C24 671 aaPredicted RBP17.02■□□□□ 0.31
TNFSF13-203ENST00000380535 KIF1BPQ96EK5 621 aa17.02■□□□□ 0.31
TNFSF13-203ENST00000380535 A1BGP04217 495 aa17.01■□□□□ 0.31
TNFSF13-203ENST00000380535 HSP90AB3PQ58FF7 597 aa17.01■□□□□ 0.31
TNFSF13-203ENST00000380535 DNAJC10Q8IXB1 793 aa17.01■□□□□ 0.31
TNFSF13-203ENST00000380535 CCDC191Q8NCU4 936 aa17.01■□□□□ 0.31
TNFSF13-203ENST00000380535 TBC1D32Q96NH3 1257 aa17.01■□□□□ 0.31
TNFSF13-203ENST00000380535 RREB1Q92766 1687 aa17.01■□□□□ 0.31
TNFSF13-203ENST00000380535 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.01■□□□□ 0.31
TNFSF13-203ENST00000380535 TRIM28Q13263 835 aaKnown RBP17■□□□□ 0.31
TNFSF13-203ENST00000380535 TTC22Q5TAA0 569 aa17■□□□□ 0.31
TNFSF13-203ENST00000380535 CWC25Q9NXE8 425 aaPredicted RBP17■□□□□ 0.31
TNFSF13-203ENST00000380535 SURF6O75683 361 aaKnown RBP16.99■□□□□ 0.31
TNFSF13-203ENST00000380535 CYP19A1P11511 503 aaPredicted RBP16.99■□□□□ 0.31
TNFSF13-203ENST00000380535 HSPA1LP34931 641 aa16.99■□□□□ 0.31
TNFSF13-203ENST00000380535 FAM98CQ17RN3 349 aaKnown RBP16.99■□□□□ 0.31
TNFSF13-203ENST00000380535 EXOC6BQ9Y2D4 811 aa16.99■□□□□ 0.31
TNFSF13-203ENST00000380535 IL6STP40189 918 aaPredicted RBP16.99■□□□□ 0.31
TNFSF13-203ENST00000380535 KAT6BQ8WYB5 2073 aa16.99■□□□□ 0.31
TNFSF13-203ENST00000380535 ANKRD36CQ5JPF3 1778 aa16.98■□□□□ 0.31
TNFSF13-203ENST00000380535 CDC45O75419 566 aa16.98■□□□□ 0.31
TNFSF13-203ENST00000380535 CASC1Q6TDU7 716 aa16.98■□□□□ 0.31
TNFSF13-203ENST00000380535 SUCLG2Q96I99 432 aa16.98■□□□□ 0.31
TNFSF13-203ENST00000380535 STAP2Q9UGK3 403 aa16.98■□□□□ 0.31
TNFSF13-203ENST00000380535 ATRNO75882 1429 aa16.97■□□□□ 0.31
TNFSF13-203ENST00000380535 NFKBIBQ15653 356 aa16.97■□□□□ 0.31
TNFSF13-203ENST00000380535 TRPC5Q9UL62 973 aaPredicted RBP16.97■□□□□ 0.31
TNFSF13-203ENST00000380535 NHSQ6T4R5 1651 aa16.97■□□□□ 0.31
TNFSF13-203ENST00000380535 MAP3K15Q6ZN16 1313 aa16.97■□□□□ 0.31
TNFSF13-203ENST00000380535 A0A087WZG4 1122 aa16.96■□□□□ 0.31
TNFSF13-203ENST00000380535 ERVV-1B6SEH8 477 aa16.96■□□□□ 0.31
TNFSF13-203ENST00000380535 H7C1W4 665 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 158 ms