RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 USP44Q9H0E7 712 aa30.79■■■□□ 2.52
ECHDC3-201ENST00000379215 C1orf115Q9H7X2 142 aa30.79■■■□□ 2.52
ECHDC3-201ENST00000379215 ZBTB1Q9Y2K1 713 aa30.78■■■□□ 2.52
ECHDC3-201ENST00000379215 RREB1Q92766 1687 aa30.78■■■□□ 2.52
ECHDC3-201ENST00000379215 ITPK1Q13572 414 aa30.77■■■□□ 2.52
ECHDC3-201ENST00000379215 ARFGEF2Q9Y6D5 1785 aa30.77■■■□□ 2.52
ECHDC3-201ENST00000379215 ANKRD44Q8N8A2 993 aa30.76■■■□□ 2.52
ECHDC3-201ENST00000379215 HMGB2P26583 209 aaKnown RBP30.76■■■□□ 2.51
ECHDC3-201ENST00000379215 CRKLP46109 303 aaKnown RBP30.76■■■□□ 2.51
ECHDC3-201ENST00000379215 TTLL7Q6ZT98 887 aa30.76■■■□□ 2.51
ECHDC3-201ENST00000379215 MYD88Q99836 296 aa30.76■■■□□ 2.51
ECHDC3-201ENST00000379215 RGS17Q9UGC6 210 aaPredicted RBP30.76■■■□□ 2.51
ECHDC3-201ENST00000379215 C9orf78Q9NZ63 289 aaPredicted RBP30.75■■■□□ 2.51
ECHDC3-201ENST00000379215 COL5A3P25940 1745 aaPredicted RBP30.75■■■□□ 2.51
ECHDC3-201ENST00000379215 HMMRO75330 724 aa30.74■■■□□ 2.51
ECHDC3-201ENST00000379215 PTF1AQ7RTS3 328 aa30.74■■■□□ 2.51
ECHDC3-201ENST00000379215 ZNF330Q9Y3S2 320 aaPredicted RBP30.74■■■□□ 2.51
ECHDC3-201ENST00000379215 NUP188Q5SRE5 1749 aa30.74■■■□□ 2.51
ECHDC3-201ENST00000379215 CNTNAP4Q9C0A0 1308 aa30.74■■■□□ 2.51
ECHDC3-201ENST00000379215 NEURL1BA8MQ27 555 aa30.73■■■□□ 2.51
ECHDC3-201ENST00000379215 CEP85Q6P2H3 762 aa30.73■■■□□ 2.51
ECHDC3-201ENST00000379215 INTS5Q6P9B9 1019 aaKnown RBP30.73■■■□□ 2.51
ECHDC3-201ENST00000379215 IGKV5-2P06315 115 aa30.73■■■□□ 2.51
ECHDC3-201ENST00000379215 UTYO14607 1347 aa30.72■■■□□ 2.51
ECHDC3-201ENST00000379215 MAP3K15Q6ZN16 1313 aa30.72■■■□□ 2.51
ECHDC3-201ENST00000379215 LY75O60449 1722 aa30.72■■■□□ 2.51
ECHDC3-201ENST00000379215 GRM8O00222 908 aa30.72■■■□□ 2.51
ECHDC3-201ENST00000379215 CWF19L2Q2TBE0 894 aaKnown RBP30.72■■■□□ 2.51
ECHDC3-201ENST00000379215 GCC1Q96CN9 775 aa30.72■■■□□ 2.51
ECHDC3-201ENST00000379215 CCNL1Q9UK58 526 aaPredicted RBP30.72■■■□□ 2.51
ECHDC3-201ENST00000379215 EIF5P55010 431 aaKnown RBP30.71■■■□□ 2.51
ECHDC3-201ENST00000379215 HSP90AB3PQ58FF7 597 aa30.71■■■□□ 2.51
ECHDC3-201ENST00000379215 RC3H1Q5TC82 1133 aaKnown RBP30.7■■■□□ 2.51
ECHDC3-201ENST00000379215 SMC5Q8IY18 1101 aa30.7■■■□□ 2.51
ECHDC3-201ENST00000379215 ZBTB3Q9H5J0 574 aa30.7■■■□□ 2.51
ECHDC3-201ENST00000379215 ERVV-1B6SEH8 477 aa30.69■■■□□ 2.5
ECHDC3-201ENST00000379215 GCKRQ14397 625 aa30.69■■■□□ 2.5
ECHDC3-201ENST00000379215 POTEAQ6S8J7 498 aa30.69■■■□□ 2.5
ECHDC3-201ENST00000379215 LRRFIP2Q9Y608 721 aaKnown RBP30.69■■■□□ 2.5
ECHDC3-201ENST00000379215 A0A087WZG4 1122 aa30.68■■■□□ 2.5
ECHDC3-201ENST00000379215 SIRT2Q8IXJ6 389 aa30.68■■■□□ 2.5
ECHDC3-201ENST00000379215 LINC00116Q8NCU8 138 aa30.68■■■□□ 2.5
ECHDC3-201ENST00000379215 NBPF7P0C2Y1 421 aaPredicted RBP30.67■■■□□ 2.5
ECHDC3-201ENST00000379215 CCDC191Q8NCU4 936 aa30.67■■■□□ 2.5
ECHDC3-201ENST00000379215 TCIRG1Q13488 830 aa30.66■■■□□ 2.5
ECHDC3-201ENST00000379215 DZIP3Q86Y13 1208 aaKnown RBP30.66■■■□□ 2.5
ECHDC3-201ENST00000379215 TRIM37O94972 964 aa30.65■■■□□ 2.5
ECHDC3-201ENST00000379215 TRIM28Q13263 835 aaKnown RBP30.65■■■□□ 2.5
ECHDC3-201ENST00000379215 SLC27A3Q5K4L6 730 aa30.65■■■□□ 2.5
ECHDC3-201ENST00000379215 GIGYF2Q6Y7W6 1299 aaKnown RBP30.65■■■□□ 2.5
ECHDC3-201ENST00000379215 CWC25Q9NXE8 425 aaPredicted RBP30.65■■■□□ 2.5
ECHDC3-201ENST00000379215 ARXQ96QS3 562 aa30.65■■■□□ 2.5
ECHDC3-201ENST00000379215 ATP8B2P98198 1209 aa30.64■■■□□ 2.5
ECHDC3-201ENST00000379215 COL15A1P39059 1388 aa30.64■■■□□ 2.5
ECHDC3-201ENST00000379215 ISCA1Q9BUE6 129 aa30.63■■■□□ 2.49
ECHDC3-201ENST00000379215 ATP5J2-PTCD1G3V325 749 aa30.62■■■□□ 2.49
ECHDC3-201ENST00000379215 RGL2O15211 777 aa30.62■■■□□ 2.49
ECHDC3-201ENST00000379215 AFDNP55196 1824 aaKnown RBP30.62■■■□□ 2.49
ECHDC3-201ENST00000379215 DCTPP1Q9H773 170 aa30.62■■■□□ 2.49
ECHDC3-201ENST00000379215 MTX1Q13505 466 aa30.6■■■□□ 2.49
ECHDC3-201ENST00000379215 MYH14Q7Z406 1995 aaKnown RBP30.59■■■□□ 2.49
ECHDC3-201ENST00000379215 RPS6KA4O75676 772 aa30.58■■■□□ 2.49
ECHDC3-201ENST00000379215 ZNF652Q9Y2D9 606 aa30.58■■■□□ 2.49
ECHDC3-201ENST00000379215 PDZRN3Q9UPQ7 1066 aa30.58■■■□□ 2.49
ECHDC3-201ENST00000379215 TBC1D2BQ9UPU7 963 aa30.58■■■□□ 2.49
ECHDC3-201ENST00000379215 SSH3Q8TE77 659 aa30.57■■■□□ 2.48
ECHDC3-201ENST00000379215 H7C1W4 665 aa30.56■■■□□ 2.48
ECHDC3-201ENST00000379215 PLSCR1O15162 318 aa30.56■■■□□ 2.48
ECHDC3-201ENST00000379215 NUCB1Q02818 461 aa30.56■■■□□ 2.48
ECHDC3-201ENST00000379215 TAF1LQ8IZX4 1826 aa30.56■■■□□ 2.48
ECHDC3-201ENST00000379215 UBE3BQ7Z3V4 1068 aa30.55■■■□□ 2.48
ECHDC3-201ENST00000379215 PPP1R42Q7Z4L9 355 aa30.55■■■□□ 2.48
ECHDC3-201ENST00000379215 SUCLG2Q96I99 432 aa30.55■■■□□ 2.48
ECHDC3-201ENST00000379215 ZBTB47Q9UFB7 747 aaPredicted RBP30.55■■■□□ 2.48
ECHDC3-201ENST00000379215 RTCBQ9Y3I0 505 aaKnown RBP30.55■■■□□ 2.48
ECHDC3-201ENST00000379215 C4BP0C0L5 1744 aa30.55■■■□□ 2.48
ECHDC3-201ENST00000379215 ANKRD36CQ5JPF3 1778 aa30.55■■■□□ 2.48
ECHDC3-201ENST00000379215 CAMTA2O94983 1202 aa30.55■■■□□ 2.48
ECHDC3-201ENST00000379215 KCNQ4P56696 695 aa30.55■■■□□ 2.48
ECHDC3-201ENST00000379215 POLA2Q14181 598 aa30.55■■■□□ 2.48
ECHDC3-201ENST00000379215 HLFQ16534 295 aa30.55■■■□□ 2.48
ECHDC3-201ENST00000379215 GNPATO15228 680 aa30.54■■■□□ 2.48
ECHDC3-201ENST00000379215 SRGAP3O43295 1099 aa30.54■■■□□ 2.48
ECHDC3-201ENST00000379215 CLEC4GQ6UXB4 293 aa30.54■■■□□ 2.48
ECHDC3-201ENST00000379215 AK7Q96M32 723 aa30.54■■■□□ 2.48
ECHDC3-201ENST00000379215 PNMA6EA0A0J9YXQ4 647 aa30.53■■■□□ 2.48
ECHDC3-201ENST00000379215 CASP7P55210 303 aa30.52■■■□□ 2.48
ECHDC3-201ENST00000379215 CHD1LQ86WJ1 897 aa30.52■■■□□ 2.48
ECHDC3-201ENST00000379215 ADRA2BP18089 450 aa30.51■■■□□ 2.48
ECHDC3-201ENST00000379215 BICC1Q9H694 974 aaKnown RBP30.51■■■□□ 2.48
ECHDC3-201ENST00000379215 PCCAP05165 728 aaPredicted RBP30.51■■■□□ 2.47
ECHDC3-201ENST00000379215 PARP10Q53GL7 1025 aa30.51■■■□□ 2.47
ECHDC3-201ENST00000379215 NLRP10Q86W26 655 aa30.51■■■□□ 2.47
ECHDC3-201ENST00000379215 ZNF34Q8IZ26 560 aa30.51■■■□□ 2.47
ECHDC3-201ENST00000379215 ZBTB38Q8NAP3 1195 aaPredicted RBP30.51■■■□□ 2.47
ECHDC3-201ENST00000379215 BCORQ6W2J9 1755 aa30.5■■■□□ 2.47
ECHDC3-201ENST00000379215 APBA3O96018 575 aa30.5■■■□□ 2.47
ECHDC3-201ENST00000379215 HSP90AB4PQ58FF6 505 aa30.5■■■□□ 2.47
ECHDC3-201ENST00000379215 ANKRD45Q5TZF3 282 aa30.5■■■□□ 2.47
ECHDC3-201ENST00000379215 KAZALD1Q96I82 304 aa30.5■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms