RNA–Protein interactions for RNA: ENST00000377798.8

POLR1E-202, Transcript of RNA polymerase I subunit E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR1E, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-202ENST00000377798 MYD88Q99836 296 aa18.47■□□□□ 0.55
POLR1E-202ENST00000377798 QTRT2Q9H974 415 aaKnown RBP18.47■□□□□ 0.55
POLR1E-202ENST00000377798 C9orf78Q9NZ63 289 aaPredicted RBP18.47■□□□□ 0.55
POLR1E-202ENST00000377798 PALLDQ8WX93 1383 aa18.47■□□□□ 0.55
POLR1E-202ENST00000377798 NEURL1BA8MQ27 555 aa18.46■□□□□ 0.55
POLR1E-202ENST00000377798 CHD1LQ86WJ1 897 aa18.46■□□□□ 0.55
POLR1E-202ENST00000377798 SMARCC1Q92922 1105 aaPredicted RBP18.46■□□□□ 0.55
POLR1E-202ENST00000377798 UTYO14607 1347 aa18.46■□□□□ 0.55
POLR1E-202ENST00000377798 ZNF831Q5JPB2 1677 aa18.46■□□□□ 0.55
POLR1E-202ENST00000377798 GRM8O00222 908 aa18.46■□□□□ 0.54
POLR1E-202ENST00000377798 ATP8B2P98198 1209 aa18.46■□□□□ 0.54
POLR1E-202ENST00000377798 HDAC5Q9UQL6 1122 aa18.46■□□□□ 0.54
POLR1E-202ENST00000377798 ANKRD45Q5TZF3 282 aa18.45■□□□□ 0.54
POLR1E-202ENST00000377798 LOC102724428A0A0B4J2F2 783 aa18.44■□□□□ 0.54
POLR1E-202ENST00000377798 PDE4AP27815 886 aa18.44■□□□□ 0.54
POLR1E-202ENST00000377798 SIK1P57059 783 aa18.44■□□□□ 0.54
POLR1E-202ENST00000377798 SEPT12Q8IYM1 358 aa18.44■□□□□ 0.54
POLR1E-202ENST00000377798 LNPKQ9C0E8 428 aa18.44■□□□□ 0.54
POLR1E-202ENST00000377798 BTAF1O14981 1849 aa18.44■□□□□ 0.54
POLR1E-202ENST00000377798 PNMA6EA0A0J9YXQ4 647 aa18.43■□□□□ 0.54
POLR1E-202ENST00000377798 GCKRQ14397 625 aa18.43■□□□□ 0.54
POLR1E-202ENST00000377798 SBF2Q86WG5 1849 aa18.43■□□□□ 0.54
POLR1E-202ENST00000377798 RREB1Q92766 1687 aa18.43■□□□□ 0.54
POLR1E-202ENST00000377798 ATP6V1AP38606 617 aa18.43■□□□□ 0.54
POLR1E-202ENST00000377798 ZBTB1Q9Y2K1 713 aa18.42■□□□□ 0.54
POLR1E-202ENST00000377798 ZNF330Q9Y3S2 320 aaPredicted RBP18.42■□□□□ 0.54
POLR1E-202ENST00000377798 COL5A3P25940 1745 aaPredicted RBP18.42■□□□□ 0.54
POLR1E-202ENST00000377798 SSH3Q8TE77 659 aa18.41■□□□□ 0.54
POLR1E-202ENST00000377798 ZBTB3Q9H5J0 574 aa18.41■□□□□ 0.54
POLR1E-202ENST00000377798 KIF6Q6ZMV9 814 aa18.41■□□□□ 0.54
POLR1E-202ENST00000377798 PPP1R42Q7Z4L9 355 aa18.41■□□□□ 0.54
POLR1E-202ENST00000377798 BACH2Q9BYV9 841 aa18.41■□□□□ 0.54
POLR1E-202ENST00000377798 RBM19Q9Y4C8 960 aaKnown RBP18.41■□□□□ 0.54
POLR1E-202ENST00000377798 ATP5J2-PTCD1G3V325 749 aa18.4■□□□□ 0.54
POLR1E-202ENST00000377798 IL6STP40189 918 aaPredicted RBP18.4■□□□□ 0.54
POLR1E-202ENST00000377798 MTX1Q13505 466 aa18.4■□□□□ 0.54
POLR1E-202ENST00000377798 POLA2Q14181 598 aa18.4■□□□□ 0.54
POLR1E-202ENST00000377798 FAM182BQ5T319 152 aa18.4■□□□□ 0.54
POLR1E-202ENST00000377798 ITPK1Q13572 414 aa18.39■□□□□ 0.54
POLR1E-202ENST00000377798 FAM161AQ3B820 660 aa18.39■□□□□ 0.54
POLR1E-202ENST00000377798 SRGAP3O43295 1099 aa18.39■□□□□ 0.53
POLR1E-202ENST00000377798 SUCLG2Q96I99 432 aa18.39■□□□□ 0.53
POLR1E-202ENST00000377798 ZBTB47Q9UFB7 747 aaPredicted RBP18.39■□□□□ 0.53
POLR1E-202ENST00000377798 BRWD3Q6RI45 1802 aa18.39■□□□□ 0.53
POLR1E-202ENST00000377798 ZNF772Q68DY9 489 aaPredicted RBP18.38■□□□□ 0.53
POLR1E-202ENST00000377798 MAP3K15Q6ZN16 1313 aa18.38■□□□□ 0.53
POLR1E-202ENST00000377798 PTF1AQ7RTS3 328 aa18.38■□□□□ 0.53
POLR1E-202ENST00000377798 MYH14Q7Z406 1995 aaKnown RBP18.38■□□□□ 0.53
POLR1E-202ENST00000377798 KAZALD1Q96I82 304 aa18.38■□□□□ 0.53
POLR1E-202ENST00000377798 CCDC87Q9NVE4 849 aa18.38■□□□□ 0.53
POLR1E-202ENST00000377798 COL15A1P39059 1388 aa18.37■□□□□ 0.53
POLR1E-202ENST00000377798 CRKLP46109 303 aaKnown RBP18.37■□□□□ 0.53
POLR1E-202ENST00000377798 INTS5Q6P9B9 1019 aaKnown RBP18.37■□□□□ 0.53
POLR1E-202ENST00000377798 CWC25Q9NXE8 425 aaPredicted RBP18.37■□□□□ 0.53
POLR1E-202ENST00000377798 EXOC6BQ9Y2D4 811 aa18.37■□□□□ 0.53
POLR1E-202ENST00000377798 ANKRD36CQ5JPF3 1778 aa18.37■□□□□ 0.53
POLR1E-202ENST00000377798 C8orf34Q49A92 452 aa18.37■□□□□ 0.53
POLR1E-202ENST00000377798 NPM2Q86SE8 214 aaKnown RBP18.37■□□□□ 0.53
POLR1E-202ENST00000377798 CCDC191Q8NCU4 936 aa18.37■□□□□ 0.53
POLR1E-202ENST00000377798 EP400Q96L91 3159 aa18.37■□□□□ 0.53
POLR1E-202ENST00000377798 LY75O60449 1722 aa18.36■□□□□ 0.53
POLR1E-202ENST00000377798 A0A087WZG4 1122 aa18.36■□□□□ 0.53
POLR1E-202ENST00000377798 TCIRG1Q13488 830 aa18.36■□□□□ 0.53
POLR1E-202ENST00000377798 ISCA1Q9BUE6 129 aa18.36■□□□□ 0.53
POLR1E-202ENST00000377798 BICC1Q9H694 974 aaKnown RBP18.36■□□□□ 0.53
POLR1E-202ENST00000377798 EIF5P55010 431 aaKnown RBP18.35■□□□□ 0.53
POLR1E-202ENST00000377798 UBE3BQ7Z3V4 1068 aa18.35■□□□□ 0.53
POLR1E-202ENST00000377798 NUP98P52948 1817 aa18.35■□□□□ 0.53
POLR1E-202ENST00000377798 APBB1O00213 710 aa18.35■□□□□ 0.53
POLR1E-202ENST00000377798 CASP7P55210 303 aa18.35■□□□□ 0.53
POLR1E-202ENST00000377798 TRIM28Q13263 835 aaKnown RBP18.35■□□□□ 0.53
POLR1E-202ENST00000377798 GIGYF2Q6Y7W6 1299 aaKnown RBP18.35■□□□□ 0.53
POLR1E-202ENST00000377798 ARXQ96QS3 562 aa18.35■□□□□ 0.53
POLR1E-202ENST00000377798 RBM6P78332 1123 aaKnown RBP18.34■□□□□ 0.53
POLR1E-202ENST00000377798 DZIP3Q86Y13 1208 aaKnown RBP18.34■□□□□ 0.53
POLR1E-202ENST00000377798 LRRCC1Q9C099 1032 aa18.34■□□□□ 0.53
POLR1E-202ENST00000377798 ERVV-1B6SEH8 477 aa18.33■□□□□ 0.53
POLR1E-202ENST00000377798 H7C1W4 665 aa18.33■□□□□ 0.53
POLR1E-202ENST00000377798 SMARCA5O60264 1052 aaPredicted RBP18.33■□□□□ 0.53
POLR1E-202ENST00000377798 HSP90AB3PQ58FF7 597 aa18.33■□□□□ 0.53
POLR1E-202ENST00000377798 RAB11FIP3O75154 756 aa18.33■□□□□ 0.52
POLR1E-202ENST00000377798 SURF6O75683 361 aaKnown RBP18.33■□□□□ 0.52
POLR1E-202ENST00000377798 KRT27Q7Z3Y8 459 aa18.33■□□□□ 0.52
POLR1E-202ENST00000377798 LINC00116Q8NCU8 138 aa18.33■□□□□ 0.52
POLR1E-202ENST00000377798 HLFQ16534 295 aa18.32■□□□□ 0.52
POLR1E-202ENST00000377798 HSP90AB4PQ58FF6 505 aa18.32■□□□□ 0.52
POLR1E-202ENST00000377798 JARID2Q92833 1246 aaPredicted RBP18.32■□□□□ 0.52
POLR1E-202ENST00000377798 RABL6Q3YEC7 729 aaPredicted RBP18.31■□□□□ 0.52
POLR1E-202ENST00000377798 EPHA10Q5JZY3 1008 aa18.31■□□□□ 0.52
POLR1E-202ENST00000377798 FAM196AQ6ZSG2 479 aa18.31■□□□□ 0.52
POLR1E-202ENST00000377798 PLEKHM2Q8IWE5 1019 aa18.31■□□□□ 0.52
POLR1E-202ENST00000377798 BCL11BQ9C0K0 894 aaPredicted RBP18.31■□□□□ 0.52
POLR1E-202ENST00000377798 TBC1D2BQ9UPU7 963 aa18.31■□□□□ 0.52
POLR1E-202ENST00000377798 NOP58Q9Y2X3 529 aaKnown RBP18.31■□□□□ 0.52
POLR1E-202ENST00000377798 CNTNAP4Q9C0A0 1308 aa18.31■□□□□ 0.52
POLR1E-202ENST00000377798 C16orf71Q8IYS4 520 aaPredicted RBP18.31■□□□□ 0.52
POLR1E-202ENST00000377798 TAF1LQ8IZX4 1826 aa18.3■□□□□ 0.52
POLR1E-202ENST00000377798 BMP2KLQ5H9B9 411 aa18.3■□□□□ 0.52
POLR1E-202ENST00000377798 BCORQ6W2J9 1755 aa18.29■□□□□ 0.52
POLR1E-202ENST00000377798 CCNL1Q9UK58 526 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms