RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 ATG3Q9NT62 314 aa13.15□□□□□ -0.3
C9orf85-202ENST00000377027 SPG7Q9UQ90 795 aa13.15□□□□□ -0.3
C9orf85-202ENST00000377027 ADAMTS7Q9UKP4 1686 aa13.15□□□□□ -0.31
C9orf85-202ENST00000377027 LOC102724428A0A0B4J2F2 783 aa13.14□□□□□ -0.31
C9orf85-202ENST00000377027 POTEB3A0JP26 581 aa13.14□□□□□ -0.31
C9orf85-202ENST00000377027 SIK1P57059 783 aa13.14□□□□□ -0.31
C9orf85-202ENST00000377027 POTEBQ6S5H4 581 aa13.14□□□□□ -0.31
C9orf85-202ENST00000377027 AEBP1Q8IUX7 1158 aa13.14□□□□□ -0.31
C9orf85-202ENST00000377027 SMARCC1Q92922 1105 aaPredicted RBP13.14□□□□□ -0.31
C9orf85-202ENST00000377027 N4BP2Q86UW6 1770 aaPredicted RBP13.13□□□□□ -0.31
C9orf85-202ENST00000377027 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.13□□□□□ -0.31
C9orf85-202ENST00000377027 PHF14O94880 888 aa13.13□□□□□ -0.31
C9orf85-202ENST00000377027 VARS2Q5ST30 1063 aaKnown RBP13.13□□□□□ -0.31
C9orf85-202ENST00000377027 IFNL2Q8IZJ0 200 aa13.13□□□□□ -0.31
C9orf85-202ENST00000377027 BRCA1P38398 1863 aaKnown RBP13.12□□□□□ -0.31
C9orf85-202ENST00000377027 AK7Q96M32 723 aa13.12□□□□□ -0.31
C9orf85-202ENST00000377027 HS3ST6Q96QI5 342 aa13.12□□□□□ -0.31
C9orf85-202ENST00000377027 TMOD3Q9NYL9 352 aa13.12□□□□□ -0.31
C9orf85-202ENST00000377027 SSFA2P28290 1259 aa13.1□□□□□ -0.31
C9orf85-202ENST00000377027 FLAD1Q8NFF5 587 aa13.1□□□□□ -0.31
C9orf85-202ENST00000377027 KIF7Q2M1P5 1343 aa13.1□□□□□ -0.31
C9orf85-202ENST00000377027 ADCY9O60503 1353 aa13.09□□□□□ -0.31
C9orf85-202ENST00000377027 ATP6V1AP38606 617 aa13.09□□□□□ -0.31
C9orf85-202ENST00000377027 CD2APQ9Y5K6 639 aa13.09□□□□□ -0.31
C9orf85-202ENST00000377027 GNPATO15228 680 aa13.08□□□□□ -0.32
C9orf85-202ENST00000377027 IL13P35225 146 aa13.08□□□□□ -0.32
C9orf85-202ENST00000377027 FOSBP53539 338 aa13.08□□□□□ -0.32
C9orf85-202ENST00000377027 CCER1Q8TC90 406 aaPredicted RBP13.08□□□□□ -0.32
C9orf85-202ENST00000377027 PXDNLA1KZ92 1463 aa13.08□□□□□ -0.32
C9orf85-202ENST00000377027 MRC1P22897 1456 aa13.08□□□□□ -0.32
C9orf85-202ENST00000377027 ERVV-2B6SEH9 535 aa13.07□□□□□ -0.32
C9orf85-202ENST00000377027 C1QTNF8P60827 252 aa13.07□□□□□ -0.32
C9orf85-202ENST00000377027 ZNF530Q6P9A1 599 aaPredicted RBP13.07□□□□□ -0.32
C9orf85-202ENST00000377027 WWC3Q9ULE0 1092 aa13.07□□□□□ -0.32
C9orf85-202ENST00000377027 COL3A1P02461 1466 aaPredicted RBP13.07□□□□□ -0.32
C9orf85-202ENST00000377027 UBR2Q8IWV8 1755 aa13.07□□□□□ -0.32
C9orf85-202ENST00000377027 ATP10DQ9P241 1426 aa13.06□□□□□ -0.32
C9orf85-202ENST00000377027 MORC1Q86VD1 984 aa13.06□□□□□ -0.32
C9orf85-202ENST00000377027 ZNF454Q8N9F8 522 aa13.06□□□□□ -0.32
C9orf85-202ENST00000377027 DCAF5Q96JK2 942 aa13.06□□□□□ -0.32
C9orf85-202ENST00000377027 C10orf71Q711Q0 1435 aa13.05□□□□□ -0.32
C9orf85-202ENST00000377027 KCPQ6ZWJ8 1503 aa13.05□□□□□ -0.32
C9orf85-202ENST00000377027 PER1O15534 1290 aaPredicted RBP13.05□□□□□ -0.32
C9orf85-202ENST00000377027 SULT6B1Q6IMI4 303 aa13.05□□□□□ -0.32
C9orf85-202ENST00000377027 DDX12PQ92771 950 aa13.05□□□□□ -0.32
C9orf85-202ENST00000377027 CNTNAP4Q9C0A0 1308 aa13.05□□□□□ -0.32
C9orf85-202ENST00000377027 SIPA1L3O60292 1781 aaPredicted RBP13.04□□□□□ -0.32
C9orf85-202ENST00000377027 SEMA3EO15041 775 aa13.04□□□□□ -0.32
C9orf85-202ENST00000377027 PLEKHO1Q53GL0 409 aaPredicted RBP13.04□□□□□ -0.32
C9orf85-202ENST00000377027 PPP4R3BQ5MIZ7 849 aa13.04□□□□□ -0.32
C9orf85-202ENST00000377027 PCDHGA10Q9Y5H3 936 aa13.04□□□□□ -0.32
C9orf85-202ENST00000377027 GRIN3BO60391 1043 aa13.03□□□□□ -0.32
C9orf85-202ENST00000377027 MMP10P09238 476 aa13.03□□□□□ -0.32
C9orf85-202ENST00000377027 GYS1P13807 737 aa13.03□□□□□ -0.32
C9orf85-202ENST00000377027 AMOTQ4VCS5 1084 aa13.03□□□□□ -0.32
C9orf85-202ENST00000377027 ZNF687Q8N1G0 1237 aa13.03□□□□□ -0.32
C9orf85-202ENST00000377027 AFDNP55196 1824 aaKnown RBP13.03□□□□□ -0.32
C9orf85-202ENST00000377027 ARFGEF1Q9Y6D6 1849 aa13.03□□□□□ -0.32
C9orf85-202ENST00000377027 HSP90AB1P08238 724 aaKnown RBP13.02□□□□□ -0.33
C9orf85-202ENST00000377027 RC3H1Q5TC82 1133 aaKnown RBP13.02□□□□□ -0.33
C9orf85-202ENST00000377027 NFATC2IPQ8NCF5 419 aa13.02□□□□□ -0.33
C9orf85-202ENST00000377027 KNSTRNQ9Y448 316 aa13.02□□□□□ -0.33
C9orf85-202ENST00000377027 PTCD1O75127 700 aaKnown RBP13.01□□□□□ -0.33
C9orf85-202ENST00000377027 RPS6KA4O75676 772 aa13.01□□□□□ -0.33
C9orf85-202ENST00000377027 HMGB2P26583 209 aaKnown RBP13.01□□□□□ -0.33
C9orf85-202ENST00000377027 MTHFSP49914 203 aa13.01□□□□□ -0.33
C9orf85-202ENST00000377027 CABP4P57796 275 aa13.01□□□□□ -0.33
C9orf85-202ENST00000377027 LGR6Q9HBX8 967 aa13.01□□□□□ -0.33
C9orf85-202ENST00000377027 RTCBQ9Y3I0 505 aaKnown RBP13.01□□□□□ -0.33
C9orf85-202ENST00000377027 NRXN2Q9P2S2 1712 aa13.01□□□□□ -0.33
C9orf85-202ENST00000377027 SENP3-EIF4A1A0A087X0R7 540 aa13□□□□□ -0.33
C9orf85-202ENST00000377027 GRXCR2A6NFK2 248 aa13□□□□□ -0.33
C9orf85-202ENST00000377027 GIGYF1O75420 1035 aaPredicted RBP13□□□□□ -0.33
C9orf85-202ENST00000377027 MLLT3P42568 568 aaPredicted RBP13□□□□□ -0.33
C9orf85-202ENST00000377027 CRKLP46109 303 aaKnown RBP13□□□□□ -0.33
C9orf85-202ENST00000377027 ZDHHC16Q969W1 377 aa13□□□□□ -0.33
C9orf85-202ENST00000377027 EPAS1Q99814 870 aa13□□□□□ -0.33
C9orf85-202ENST00000377027 SRP68Q9UHB9 627 aaKnown RBP13□□□□□ -0.33
C9orf85-202ENST00000377027 HMOX1P09601 288 aa12.99□□□□□ -0.33
C9orf85-202ENST00000377027 TRAPPC3LQ5T215 181 aa12.99□□□□□ -0.33
C9orf85-202ENST00000377027 INTS5Q6P9B9 1019 aaKnown RBP12.99□□□□□ -0.33
C9orf85-202ENST00000377027 CDAN1Q8IWY9 1227 aa12.99□□□□□ -0.33
C9orf85-202ENST00000377027 DLEC1Q9Y238 1755 aa12.99□□□□□ -0.33
C9orf85-202ENST00000377027 USP42Q9H9J4 1324 aaKnown RBP12.98□□□□□ -0.33
C9orf85-202ENST00000377027 KCNA3P22001 575 aa12.98□□□□□ -0.33
C9orf85-202ENST00000377027 DDR1Q08345 913 aa12.98□□□□□ -0.33
C9orf85-202ENST00000377027 AKAP4Q5JQC9 854 aa12.98□□□□□ -0.33
C9orf85-202ENST00000377027 C1orf141Q5JVX7 400 aa12.98□□□□□ -0.33
C9orf85-202ENST00000377027 TYW1BQ6NUM6 668 aa12.98□□□□□ -0.33
C9orf85-202ENST00000377027 SLC52A2Q9HAB3 445 aa12.98□□□□□ -0.33
C9orf85-202ENST00000377027 A0A0G2JLW4 131 aa12.97□□□□□ -0.33
C9orf85-202ENST00000377027 TESPA1A2RU30 521 aaPredicted RBP12.97□□□□□ -0.33
C9orf85-202ENST00000377027 RNMTO43148 476 aaKnown RBP12.97□□□□□ -0.33
C9orf85-202ENST00000377027 SLC39A6Q13433 755 aa12.97□□□□□ -0.33
C9orf85-202ENST00000377027 MTHFSDQ2M296 383 aaKnown RBP12.97□□□□□ -0.33
C9orf85-202ENST00000377027 CC2D1BQ5T0F9 858 aaKnown RBP12.97□□□□□ -0.33
C9orf85-202ENST00000377027 DNAJC10Q8IXB1 793 aa12.97□□□□□ -0.33
C9orf85-202ENST00000377027 FBXW7Q969H0 707 aa12.97□□□□□ -0.33
C9orf85-202ENST00000377027 SBF1O95248 1867 aa12.97□□□□□ -0.33
C9orf85-202ENST00000377027 NPC1L1Q9UHC9 1359 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms