RNA–Protein interactions for RNA: ENST00000376757.9

SSH3-203, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2 BASIC

Gene SSH3, Length 2,990 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-203ENST00000376757 KLHDC4Q8TBB5 520 aa18.89■□□□□ 0.61
SSH3-203ENST00000376757 KIF1BPQ96EK5 621 aa18.89■□□□□ 0.61
SSH3-203ENST00000376757 NDUFB9Q9Y6M9 179 aa18.89■□□□□ 0.61
SSH3-203ENST00000376757 MON2Q7Z3U7 1717 aa18.89■□□□□ 0.61
SSH3-203ENST00000376757 NRXN3Q9Y4C0 1643 aa18.89■□□□□ 0.61
SSH3-203ENST00000376757 CDC37L1Q7L3B6 337 aa18.89■□□□□ 0.61
SSH3-203ENST00000376757 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.89■□□□□ 0.61
SSH3-203ENST00000376757 LIG1P18858 919 aa18.88■□□□□ 0.61
SSH3-203ENST00000376757 ABTB2Q8N961 1025 aa18.88■□□□□ 0.61
SSH3-203ENST00000376757 IGSF1Q8N6C5 1336 aa18.88■□□□□ 0.61
SSH3-203ENST00000376757 SETD1AO15047 1707 aaKnown RBP18.88■□□□□ 0.61
SSH3-203ENST00000376757 CHGBP05060 677 aa18.88■□□□□ 0.61
SSH3-203ENST00000376757 AIMP1Q12904 312 aaKnown RBP18.88■□□□□ 0.61
SSH3-203ENST00000376757 MPRIPQ6WCQ1 1025 aa18.88■□□□□ 0.61
SSH3-203ENST00000376757 AMOTL2Q9Y2J4 779 aa18.88■□□□□ 0.61
SSH3-203ENST00000376757 PLEKHG3A1L390 1219 aa18.87■□□□□ 0.61
SSH3-203ENST00000376757 LRMPQ12912 555 aa18.87■□□□□ 0.61
SSH3-203ENST00000376757 EDC3Q96F86 508 aaKnown RBP18.87■□□□□ 0.61
SSH3-203ENST00000376757 ITSN1Q15811 1721 aa18.87■□□□□ 0.61
SSH3-203ENST00000376757 ARHGEF10O15013 1369 aa18.87■□□□□ 0.61
SSH3-203ENST00000376757 HOXC9P31274 260 aa18.87■□□□□ 0.61
SSH3-203ENST00000376757 A0A087WWV3 80 aa18.87■□□□□ 0.61
SSH3-203ENST00000376757 PTGS1P23219 599 aa18.87■□□□□ 0.61
SSH3-203ENST00000376757 CEBPZQ03701 1054 aaKnown RBP18.87■□□□□ 0.61
SSH3-203ENST00000376757 PROSER3Q2NL68 480 aa18.87■□□□□ 0.61
SSH3-203ENST00000376757 TPCN1Q9ULQ1 816 aa18.87■□□□□ 0.61
SSH3-203ENST00000376757 LARP1BQ659C4 914 aaKnown RBP18.86■□□□□ 0.61
SSH3-203ENST00000376757 TTC6Q86TZ1 520 aa18.86■□□□□ 0.61
SSH3-203ENST00000376757 AACSQ86V21 672 aa18.86■□□□□ 0.61
SSH3-203ENST00000376757 FAM184AQ8NB25 1140 aa18.86■□□□□ 0.61
SSH3-203ENST00000376757 DDX11Q96FC9 970 aa18.86■□□□□ 0.61
SSH3-203ENST00000376757 C9orf78Q9NZ63 289 aaPredicted RBP18.86■□□□□ 0.61
SSH3-203ENST00000376757 NRBP1Q9UHY1 535 aa18.86■□□□□ 0.61
SSH3-203ENST00000376757 RAB11FIP3O75154 756 aa18.86■□□□□ 0.61
SSH3-203ENST00000376757 PPP4R3BQ5MIZ7 849 aa18.86■□□□□ 0.61
SSH3-203ENST00000376757 DRC7Q8IY82 874 aa18.86■□□□□ 0.61
SSH3-203ENST00000376757 DNAAF4Q8WXU2 420 aa18.86■□□□□ 0.61
SSH3-203ENST00000376757 TLR7Q9NYK1 1049 aaKnown RBP18.86■□□□□ 0.61
SSH3-203ENST00000376757 BOLA2Q9H3K6 86 aa18.85■□□□□ 0.61
SSH3-203ENST00000376757 PRDM4Q9UKN5 801 aa18.85■□□□□ 0.61
SSH3-203ENST00000376757 SBNO1A3KN83 1393 aa18.85■□□□□ 0.61
SSH3-203ENST00000376757 IFIT2P09913 472 aaKnown RBP18.85■□□□□ 0.61
SSH3-203ENST00000376757 FBXW7Q969H0 707 aa18.85■□□□□ 0.61
SSH3-203ENST00000376757 LRRC59Q96AG4 307 aaKnown RBP18.85■□□□□ 0.61
SSH3-203ENST00000376757 MAP7D2Q96T17 732 aa18.85■□□□□ 0.61
SSH3-203ENST00000376757 CYP46A1Q9Y6A2 500 aa18.85■□□□□ 0.61
SSH3-203ENST00000376757 CLASRPQ8N2M8 674 aaKnown RBP18.84■□□□□ 0.61
SSH3-203ENST00000376757 ATP2B3Q16720 1220 aa18.84■□□□□ 0.61
SSH3-203ENST00000376757 BCL2L12Q9HB09 334 aa18.84■□□□□ 0.61
SSH3-203ENST00000376757 RBM8AQ9Y5S9 174 aaKnown RBP18.84■□□□□ 0.61
SSH3-203ENST00000376757 SSH2Q76I76 1423 aa18.84■□□□□ 0.61
SSH3-203ENST00000376757 POLA2Q14181 598 aa18.84■□□□□ 0.61
SSH3-203ENST00000376757 BEND3Q5T5X7 828 aa18.84■□□□□ 0.61
SSH3-203ENST00000376757 NRKQ7Z2Y5 1582 aa18.83■□□□□ 0.61
SSH3-203ENST00000376757 RIOK3O14730 519 aaKnown RBP18.83■□□□□ 0.61
SSH3-203ENST00000376757 KIF3AQ9Y496 699 aa18.83■□□□□ 0.61
SSH3-203ENST00000376757 MAP3K5Q99683 1374 aa18.83■□□□□ 0.6
SSH3-203ENST00000376757 C16orf45Q96MC5 204 aaPredicted RBP18.83■□□□□ 0.6
SSH3-203ENST00000376757 DACT1Q9NYF0 836 aa18.83■□□□□ 0.6
SSH3-203ENST00000376757 HDGFP51858 240 aaKnown RBP18.82■□□□□ 0.6
SSH3-203ENST00000376757 NAA30Q147X3 362 aaPredicted RBP18.82■□□□□ 0.6
SSH3-203ENST00000376757 TMEM87AQ8NBN3 555 aa18.82■□□□□ 0.6
SSH3-203ENST00000376757 FUCA2Q9BTY2 467 aa18.82■□□□□ 0.6
SSH3-203ENST00000376757 LRRC2Q9BYS8 371 aa18.82■□□□□ 0.6
SSH3-203ENST00000376757 TAOK2Q9UL54 1235 aa18.82■□□□□ 0.6
SSH3-203ENST00000376757 MAP3K2Q9Y2U5 619 aa18.82■□□□□ 0.6
SSH3-203ENST00000376757 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.82■□□□□ 0.6
SSH3-203ENST00000376757 NMIQ13287 307 aaPredicted RBP18.82■□□□□ 0.6
SSH3-203ENST00000376757 UVSSAQ2YD98 709 aa18.82■□□□□ 0.6
SSH3-203ENST00000376757 AKAP12Q02952 1782 aa18.82■□□□□ 0.6
SSH3-203ENST00000376757 KDRP35968 1356 aa18.81■□□□□ 0.6
SSH3-203ENST00000376757 USP31Q70CQ4 1352 aa18.81■□□□□ 0.6
SSH3-203ENST00000376757 GLRX3O76003 335 aaKnown RBP18.81■□□□□ 0.6
SSH3-203ENST00000376757 PIP4K2AP48426 406 aaPredicted RBP18.81■□□□□ 0.6
SSH3-203ENST00000376757 CCDC94Q9BW85 323 aaPredicted RBP18.81■□□□□ 0.6
SSH3-203ENST00000376757 ATP6V1DQ9Y5K8 247 aa18.81■□□□□ 0.6
SSH3-203ENST00000376757 A0A0D9SFI3 127 aa18.81■□□□□ 0.6
SSH3-203ENST00000376757 GOLGA6L4A6NEF3 574 aa18.81■□□□□ 0.6
SSH3-203ENST00000376757 CREB3L3Q68CJ9 461 aa18.81■□□□□ 0.6
SSH3-203ENST00000376757 CCDC186Q7Z3E2 898 aa18.81■□□□□ 0.6
SSH3-203ENST00000376757 ANO6Q4KMQ2 910 aa18.8■□□□□ 0.6
SSH3-203ENST00000376757 NBPF6Q5VWK0 638 aa18.8■□□□□ 0.6
SSH3-203ENST00000376757 LARP1Q6PKG0 1096 aaKnown RBP18.8■□□□□ 0.6
SSH3-203ENST00000376757 NBPF4Q96M43 638 aa18.8■□□□□ 0.6
SSH3-203ENST00000376757 ECHDC1Q9NTX5 307 aa18.8■□□□□ 0.6
SSH3-203ENST00000376757 JAK2O60674 1132 aa18.8■□□□□ 0.6
SSH3-203ENST00000376757 U2AF2P26368 475 aaKnown RBP eCLIP18.8■□□□□ 0.6
SSH3-203ENST00000376757 EIF4A1P60842 406 aaKnown RBP18.8■□□□□ 0.6
SSH3-203ENST00000376757 TEFQ10587 303 aa18.8■□□□□ 0.6
SSH3-203ENST00000376757 TMEM2Q9UHN6 1383 aa18.8■□□□□ 0.6
SSH3-203ENST00000376757 CCDC192P0DO97 292 aa18.79■□□□□ 0.6
SSH3-203ENST00000376757 ZKSCAN1P17029 563 aaPredicted RBP18.79■□□□□ 0.6
SSH3-203ENST00000376757 LMOD2Q6P5Q4 547 aa18.79■□□□□ 0.6
SSH3-203ENST00000376757 KIAA1524Q8TCG1 905 aa18.79■□□□□ 0.6
SSH3-203ENST00000376757 BTBD11A6QL63 1104 aa18.79■□□□□ 0.6
SSH3-203ENST00000376757 TYRO3Q06418 890 aa18.79■□□□□ 0.6
SSH3-203ENST00000376757 ERCC4Q92889 916 aaPredicted RBP18.79■□□□□ 0.6
SSH3-203ENST00000376757 NUP62CLQ9H1M0 184 aa18.79■□□□□ 0.6
SSH3-203ENST00000376757 TUBGCP6Q96RT7 1819 aa18.79■□□□□ 0.6
SSH3-203ENST00000376757 ZNF592Q92610 1267 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms