RNA–Protein interactions for RNA: ENST00000375446.4

NINJ1-201, Transcript of ninjurin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NINJ1, Length 1,281 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-201ENST00000375446 MAP3K15Q6ZN16 1313 aa28.26■■■□□ 2.11
NINJ1-201ENST00000375446 ERVV-1B6SEH8 477 aa28.26■■■□□ 2.11
NINJ1-201ENST00000375446 HLFQ16534 295 aa28.26■■■□□ 2.11
NINJ1-201ENST00000375446 HDGFL1Q5TGJ6 251 aa28.26■■■□□ 2.11
NINJ1-201ENST00000375446 SALL2Q9Y467 1007 aaPredicted RBP28.26■■■□□ 2.11
NINJ1-201ENST00000375446 UTRNP46939 3433 aa28.25■■■□□ 2.11
NINJ1-201ENST00000375446 GOLGB1Q14789 3259 aaKnown RBP28.25■■■□□ 2.11
NINJ1-201ENST00000375446 ANXA1P04083 346 aa28.25■■■□□ 2.11
NINJ1-201ENST00000375446 NRXN2Q9P2S2 1712 aa28.25■■■□□ 2.11
NINJ1-201ENST00000375446 KIAA1551Q9HCM1 1747 aa28.24■■■□□ 2.11
NINJ1-201ENST00000375446 KCNA3P22001 575 aa28.24■■■□□ 2.11
NINJ1-201ENST00000375446 DDX21Q9NR30 783 aaKnown RBP eCLIP28.24■■■□□ 2.11
NINJ1-201ENST00000375446 IL16Q14005 1332 aa28.23■■■□□ 2.11
NINJ1-201ENST00000375446 CHRNA5P30532 468 aa28.23■■■□□ 2.11
NINJ1-201ENST00000375446 PRR5LQ6MZQ0 368 aa28.23■■■□□ 2.11
NINJ1-201ENST00000375446 NIP7Q9Y221 180 aaKnown RBP eCLIP28.23■■■□□ 2.11
NINJ1-201ENST00000375446 AFDNP55196 1824 aaKnown RBP28.22■■■□□ 2.11
NINJ1-201ENST00000375446 YY1P25490 414 aa28.22■■■□□ 2.11
NINJ1-201ENST00000375446 ZBTB3Q9H5J0 574 aa28.22■■■□□ 2.11
NINJ1-201ENST00000375446 CHPF2Q9P2E5 772 aa28.22■■■□□ 2.11
NINJ1-201ENST00000375446 CCER2I3L3R5 266 aa28.21■■■□□ 2.11
NINJ1-201ENST00000375446 ELL2O00472 640 aaPredicted RBP28.21■■■□□ 2.11
NINJ1-201ENST00000375446 CNBD1Q8NA66 436 aa28.21■■■□□ 2.11
NINJ1-201ENST00000375446 C8orf58Q8NAV2 365 aa28.21■■■□□ 2.11
NINJ1-201ENST00000375446 N4BP2Q86UW6 1770 aaPredicted RBP28.21■■■□□ 2.11
NINJ1-201ENST00000375446 NPHP1O15259 732 aa28.2■■■□□ 2.1
NINJ1-201ENST00000375446 NBPF5PQ86XG9 351 aaPredicted RBP28.2■■■□□ 2.1
NINJ1-201ENST00000375446 CCDC24Q8N4L8 307 aa28.2■■■□□ 2.1
NINJ1-201ENST00000375446 TSR2Q969E8 191 aaKnown RBP28.2■■■□□ 2.1
NINJ1-201ENST00000375446 PIM2Q9P1W9 311 aa28.2■■■□□ 2.1
NINJ1-201ENST00000375446 BCS1LQ9Y276 419 aa28.2■■■□□ 2.1
NINJ1-201ENST00000375446 COPS6Q7L5N1 327 aa28.19■■■□□ 2.1
NINJ1-201ENST00000375446 WDR63Q8IWG1 891 aa28.19■■■□□ 2.1
NINJ1-201ENST00000375446 XAGE3Q8WTP9 111 aa28.19■■■□□ 2.1
NINJ1-201ENST00000375446 BRIP1Q9BX63 1249 aa28.19■■■□□ 2.1
NINJ1-201ENST00000375446 DBF4Q9UBU7 674 aaPredicted RBP28.19■■■□□ 2.1
NINJ1-201ENST00000375446 ST5P78524 1137 aa28.17■■■□□ 2.1
NINJ1-201ENST00000375446 AIMP1Q12904 312 aaKnown RBP28.17■■■□□ 2.1
NINJ1-201ENST00000375446 GIGYF2Q6Y7W6 1299 aaKnown RBP28.17■■■□□ 2.1
NINJ1-201ENST00000375446 ATP10DQ9P241 1426 aa28.17■■■□□ 2.1
NINJ1-201ENST00000375446 TPTE2Q6XPS3 522 aa28.16■■■□□ 2.1
NINJ1-201ENST00000375446 C2CD5Q86YS7 1000 aa28.16■■■□□ 2.1
NINJ1-201ENST00000375446 FAM177BA6PVY3 158 aa28.15■■■□□ 2.1
NINJ1-201ENST00000375446 H0YIN7 160 aa28.15■■■□□ 2.1
NINJ1-201ENST00000375446 PDE6BP35913 854 aa28.15■■■□□ 2.1
NINJ1-201ENST00000375446 DALRD3Q5D0E6 543 aaKnown RBP28.15■■■□□ 2.1
NINJ1-201ENST00000375446 DIEXFQ68CQ4 756 aaKnown RBP28.15■■■□□ 2.1
NINJ1-201ENST00000375446 GPTP24298 496 aa28.14■■■□□ 2.1
NINJ1-201ENST00000375446 TSPYL6Q8N831 410 aa28.14■■■□□ 2.1
NINJ1-201ENST00000375446 HYPKQ9NX55 129 aa28.14■■■□□ 2.1
NINJ1-201ENST00000375446 PDZRN3Q9UPQ7 1066 aa28.14■■■□□ 2.1
NINJ1-201ENST00000375446 ZNF34Q8IZ26 560 aa28.13■■■□□ 2.09
NINJ1-201ENST00000375446 CHMP4AQ9BY43 222 aa28.13■■■□□ 2.09
NINJ1-201ENST00000375446 FANCIQ9NVI1 1328 aa28.12■■■□□ 2.09
NINJ1-201ENST00000375446 NYXQ9GZU5 481 aa28.11■■■□□ 2.09
NINJ1-201ENST00000375446 UBN2Q6ZU65 1347 aa28.11■■■□□ 2.09
NINJ1-201ENST00000375446 CCDC30Q5VVM6 783 aa28.1■■■□□ 2.09
NINJ1-201ENST00000375446 BRCA1P38398 1863 aaKnown RBP28.09■■■□□ 2.09
NINJ1-201ENST00000375446 GTF2E1P29083 439 aaPredicted RBP28.09■■■□□ 2.09
NINJ1-201ENST00000375446 NUP98P52948 1817 aa28.08■■■□□ 2.09
NINJ1-201ENST00000375446 TWISTNBQ3B726 338 aaPredicted RBP28.08■■■□□ 2.09
NINJ1-201ENST00000375446 PARP10Q53GL7 1025 aa28.08■■■□□ 2.09
NINJ1-201ENST00000375446 HSP90AB3PQ58FF7 597 aa28.08■■■□□ 2.09
NINJ1-201ENST00000375446 SUSD4Q5VX71 490 aa28.08■■■□□ 2.09
NINJ1-201ENST00000375446 TTLL6Q8N841 843 aa28.08■■■□□ 2.09
NINJ1-201ENST00000375446 PLBD2Q8NHP8 589 aa28.08■■■□□ 2.09
NINJ1-201ENST00000375446 SPINK5Q9NQ38 1064 aaPredicted RBP28.08■■■□□ 2.09
NINJ1-201ENST00000375446 ANKRD31Q8N7Z5 1873 aa28.08■■■□□ 2.09
NINJ1-201ENST00000375446 ANKRD13DQ6ZTN6 518 aa28.07■■■□□ 2.08
NINJ1-201ENST00000375446 ZNF622Q969S3 477 aaKnown RBP eCLIP28.07■■■□□ 2.08
NINJ1-201ENST00000375446 IBTKQ9P2D0 1353 aaPredicted RBP28.07■■■□□ 2.08
NINJ1-201ENST00000375446 CHD4Q14839 1912 aa28.06■■■□□ 2.08
NINJ1-201ENST00000375446 GOLGA2Q08379 1002 aa28.06■■■□□ 2.08
NINJ1-201ENST00000375446 TCIRG1Q13488 830 aa28.06■■■□□ 2.08
NINJ1-201ENST00000375446 ARHGAP27Q6ZUM4 889 aa28.06■■■□□ 2.08
NINJ1-201ENST00000375446 NUTM1Q86Y26 1132 aa28.06■■■□□ 2.08
NINJ1-201ENST00000375446 ZNF521Q96K83 1311 aa28.06■■■□□ 2.08
NINJ1-201ENST00000375446 SRGNP10124 158 aa28.05■■■□□ 2.08
NINJ1-201ENST00000375446 MYH16Q9H6N6 1097 aa28.05■■■□□ 2.08
NINJ1-201ENST00000375446 PHAXQ9H814 394 aaKnown RBP28.05■■■□□ 2.08
NINJ1-201ENST00000375446 KLRG2A4D1S0 409 aaPredicted RBP28.04■■■□□ 2.08
NINJ1-201ENST00000375446 NTSR2O95665 410 aa28.04■■■□□ 2.08
NINJ1-201ENST00000375446 ERFEQ4G0M1 354 aa28.04■■■□□ 2.08
NINJ1-201ENST00000375446 PPP1R42Q7Z4L9 355 aa28.04■■■□□ 2.08
NINJ1-201ENST00000375446 MIER1Q8N108 512 aa28.04■■■□□ 2.08
NINJ1-201ENST00000375446 ABCC12Q96J65 1359 aa28.03■■■□□ 2.08
NINJ1-201ENST00000375446 EXOSC9Q06265 439 aaKnown RBP28.03■■■□□ 2.08
NINJ1-201ENST00000375446 STYK1Q6J9G0 422 aa28.03■■■□□ 2.08
NINJ1-201ENST00000375446 MASTLQ96GX5 879 aa28.03■■■□□ 2.08
NINJ1-201ENST00000375446 DLEC1Q9Y238 1755 aa28.02■■■□□ 2.08
NINJ1-201ENST00000375446 NLRP10Q86W26 655 aa28.02■■■□□ 2.08
NINJ1-201ENST00000375446 UTP14AQ9BVJ6 771 aaKnown RBP28.02■■■□□ 2.08
NINJ1-201ENST00000375446 STK31Q9BXU1 1019 aa28.02■■■□□ 2.08
NINJ1-201ENST00000375446 TCERG1O14776 1098 aaKnown RBP28.01■■■□□ 2.07
NINJ1-201ENST00000375446 CNKSR1Q969H4 720 aa28.01■■■□□ 2.07
NINJ1-201ENST00000375446 COL11A2P13942 1736 aaPredicted RBP28.01■■■□□ 2.07
NINJ1-201ENST00000375446 RIC3Q7Z5B4 369 aa28■■■□□ 2.07
NINJ1-201ENST00000375446 ARFGEF1Q9Y6D6 1849 aa27.99■■■□□ 2.07
NINJ1-201ENST00000375446 NPR1P16066 1061 aa27.99■■■□□ 2.07
NINJ1-201ENST00000375446 VAMP4O75379 141 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms