RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 TRAF1Q13077 416 aa7.6□□□□□ -1.19
UBR4-204ENST00000375254 TSGA10Q9BZW7 698 aa7.6□□□□□ -1.19
UBR4-204ENST00000375254 LNPKQ9C0E8 428 aa7.6□□□□□ -1.19
UBR4-204ENST00000375254 ZSCAN16Q9H4T2 348 aaPredicted RBP7.6□□□□□ -1.19
UBR4-204ENST00000375254 GOLGA6AQ9NYA3 693 aa7.6□□□□□ -1.19
UBR4-204ENST00000375254 PPP1R12AO14974 1030 aaPredicted RBP7.6□□□□□ -1.19
UBR4-204ENST00000375254 CLUL1Q15846 466 aa7.6□□□□□ -1.19
UBR4-204ENST00000375254 ZNF131P52739 623 aa7.6□□□□□ -1.19
UBR4-204ENST00000375254 FKBP15Q5T1M5 1219 aa7.6□□□□□ -1.19
UBR4-204ENST00000375254 GDAP1L1Q96MZ0 367 aa7.6□□□□□ -1.19
UBR4-204ENST00000375254 PRPHP41219 470 aa7.59□□□□□ -1.19
UBR4-204ENST00000375254 KIAA0753Q2KHM9 967 aa7.59□□□□□ -1.19
UBR4-204ENST00000375254 RAB3IL1Q8TBN0 382 aa7.59□□□□□ -1.19
UBR4-204ENST00000375254 GOPCQ9HD26 462 aa7.59□□□□□ -1.19
UBR4-204ENST00000375254 RRAGDQ9NQL2 400 aaPredicted RBP7.59□□□□□ -1.19
UBR4-204ENST00000375254 HNRNPMP52272 730 aaKnown RBP eCLIP7.59□□□□□ -1.19
UBR4-204ENST00000375254 RPGRIP1Q96KN7 1286 aa7.59□□□□□ -1.19
UBR4-204ENST00000375254 PLVAPQ9BX97 442 aa7.59□□□□□ -1.19
UBR4-204ENST00000375254 RFC1P35251 1148 aaPredicted RBP7.59□□□□□ -1.19
UBR4-204ENST00000375254 SLC4A10Q6U841 1118 aa7.59□□□□□ -1.19
UBR4-204ENST00000375254 RALYLQ86SE5 291 aaKnown RBP7.59□□□□□ -1.19
UBR4-204ENST00000375254 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.59□□□□□ -1.198e-7■■■■□ 19.3
UBR4-204ENST00000375254 ATP5DP30049 168 aa7.59□□□□□ -1.19
UBR4-204ENST00000375254 SESN3P58005 492 aa7.59□□□□□ -1.19
UBR4-204ENST00000375254 CWC27Q6UX04 472 aaKnown RBP7.59□□□□□ -1.19
UBR4-204ENST00000375254 SENP3-EIF4A1A0A087X0R7 540 aa7.59□□□□□ -1.19
UBR4-204ENST00000375254 STMN1P16949 149 aa7.59□□□□□ -1.19
UBR4-204ENST00000375254 MPHOSPH6Q99547 160 aaKnown RBP7.59□□□□□ -1.19
UBR4-204ENST00000375254 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.59□□□□□ -1.191e-6■■■■■ 42.3
UBR4-204ENST00000375254 FAM114A2Q9NRY5 505 aa7.59□□□□□ -1.19
UBR4-204ENST00000375254 GNAI3P08754 354 aa7.59□□□□□ -1.19
UBR4-204ENST00000375254 SNCBQ16143 134 aa7.59□□□□□ -1.19
UBR4-204ENST00000375254 FHAD1B1AJZ9 1412 aa7.59□□□□□ -1.2
UBR4-204ENST00000375254 FERP16591 822 aa7.59□□□□□ -1.2
UBR4-204ENST00000375254 MAP3K21Q5TCX8 1036 aa7.59□□□□□ -1.2
UBR4-204ENST00000375254 SMARCC2Q8TAQ2 1214 aa7.59□□□□□ -1.2
UBR4-204ENST00000375254 APAF1O14727 1248 aa7.59□□□□□ -1.2
UBR4-204ENST00000375254 APBA1Q02410 837 aa7.58□□□□□ -1.2
UBR4-204ENST00000375254 CHD1LQ86WJ1 897 aa7.58□□□□□ -1.2
UBR4-204ENST00000375254 ZFP91Q96JP5 570 aaPredicted RBP7.58□□□□□ -1.2
UBR4-204ENST00000375254 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.58□□□□□ -1.2
UBR4-204ENST00000375254 POTEJP0CG39 1038 aa7.58□□□□□ -1.2
UBR4-204ENST00000375254 SMC1BQ8NDV3 1235 aa7.58□□□□□ -1.2
UBR4-204ENST00000375254 IQCGQ9H095 443 aaKnown RBP7.58□□□□□ -1.2
UBR4-204ENST00000375254 IBSPP21815 317 aaPredicted RBP7.58□□□□□ -1.2
UBR4-204ENST00000375254 BLVRAP53004 296 aa7.58□□□□□ -1.2
UBR4-204ENST00000375254 ANAPC15P60006 121 aa7.58□□□□□ -1.2
UBR4-204ENST00000375254 MICAL1Q8TDZ2 1067 aa7.58□□□□□ -1.2
UBR4-204ENST00000375254 BRPF1P55201 1214 aaPredicted RBP7.58□□□□□ -1.2
UBR4-204ENST00000375254 ZNF280CQ8ND82 737 aa7.58□□□□□ -1.2
UBR4-204ENST00000375254 TTC36A6NLP5 189 aa7.58□□□□□ -1.2
UBR4-204ENST00000375254 UBE4AQ14139 1066 aa7.58□□□□□ -1.2
UBR4-204ENST00000375254 INTS4Q96HW7 963 aaKnown RBP7.58□□□□□ -1.2
UBR4-204ENST00000375254 CABS1Q96KC9 395 aa7.58□□□□□ -1.2
UBR4-204ENST00000375254 CETN3O15182 167 aa7.58□□□□□ -1.2
UBR4-204ENST00000375254 NFXL1Q6ZNB6 911 aa7.58□□□□□ -1.2
UBR4-204ENST00000375254 RPGRIP1LQ68CZ1 1315 aa7.58□□□□□ -1.2
UBR4-204ENST00000375254 NPM1P06748 294 aaKnown RBP eCLIP7.58□□□□□ -1.2
UBR4-204ENST00000375254 ZBTB16Q05516 673 aa7.58□□□□□ -1.2
UBR4-204ENST00000375254 ZFYVE27Q5T4F4 411 aa7.58□□□□□ -1.2
UBR4-204ENST00000375254 GNAI1P63096 354 aa7.58□□□□□ -1.2
UBR4-204ENST00000375254 CCDC27Q2M243 656 aa7.58□□□□□ -1.2
UBR4-204ENST00000375254 CEP85LQ5SZL2 805 aa7.58□□□□□ -1.2
UBR4-204ENST00000375254 LZICQ8WZA0 190 aa7.58□□□□□ -1.2
UBR4-204ENST00000375254 HLTFQ14527 1009 aaKnown RBP eCLIP7.57□□□□□ -1.24e-7■□□□□ 10.6
UBR4-204ENST00000375254 TRIM6Q9C030 488 aaPredicted RBP7.57□□□□□ -1.2
UBR4-204ENST00000375254 CHCHD3Q9NX63 227 aaKnown RBP7.57□□□□□ -1.2
UBR4-204ENST00000375254 PPP1R1BQ9UD71 204 aaPredicted RBP7.57□□□□□ -1.2
UBR4-204ENST00000375254 RWDD2BP57060 319 aa7.57□□□□□ -1.2
UBR4-204ENST00000375254 JAKMIP1Q96N16 626 aaKnown RBP7.57□□□□□ -1.2
UBR4-204ENST00000375254 AMOTL1Q8IY63 956 aa7.57□□□□□ -1.2
UBR4-204ENST00000375254 PPP2R5EQ16537 467 aa7.57□□□□□ -1.2
UBR4-204ENST00000375254 PDRG1Q9NUG6 133 aa7.57□□□□□ -1.2
UBR4-204ENST00000375254 MAATS1Q7Z4T9 603 aa7.57□□□□□ -1.2
UBR4-204ENST00000375254 FBXW7Q969H0 707 aa7.57□□□□□ -1.2
UBR4-204ENST00000375254 DNAI1Q9UI46 699 aa7.57□□□□□ -1.2
UBR4-204ENST00000375254 CHUKO15111 745 aa7.57□□□□□ -1.2
UBR4-204ENST00000375254 TRIM22Q8IYM9 498 aa7.57□□□□□ -1.2
UBR4-204ENST00000375254 CCDC68Q9H2F9 335 aa7.57□□□□□ -1.2
UBR4-204ENST00000375254 RASAL2Q9UJF2 1139 aa7.57□□□□□ -1.2
UBR4-204ENST00000375254 UBASH3AP57075 661 aa7.57□□□□□ -1.2
UBR4-204ENST00000375254 NBPF10Q6P3W6 841 aaKnown RBP7.57□□□□□ -1.2
UBR4-204ENST00000375254 DIAPH1O60610 1272 aaKnown RBP7.57□□□□□ -1.2
UBR4-204ENST00000375254 SLC3A2P08195 630 aaKnown RBP7.57□□□□□ -1.2
UBR4-204ENST00000375254 TMED1Q13445 227 aa7.57□□□□□ -1.2
UBR4-204ENST00000375254 ACTN2P35609 894 aa7.57□□□□□ -1.2
UBR4-204ENST00000375254 SPAG1Q07617 926 aa7.56□□□□□ -1.2
UBR4-204ENST00000375254 IFT20Q8IY31 132 aa7.56□□□□□ -1.2
UBR4-204ENST00000375254 LOC102724159A0A0B4J2E5 919 aa7.56□□□□□ -1.2
UBR4-204ENST00000375254 PWP2Q15269 919 aaKnown RBP7.56□□□□□ -1.2
UBR4-204ENST00000375254 CNPY4Q8N129 248 aa7.56□□□□□ -1.2
UBR4-204ENST00000375254 ATAD2Q6PL18 1390 aa7.56□□□□□ -1.2
UBR4-204ENST00000375254 RAB3GAP1Q15042 981 aa7.56□□□□□ -1.2
UBR4-204ENST00000375254 SLC4A8Q2Y0W8 1093 aa7.56□□□□□ -1.2
UBR4-204ENST00000375254 P3H4Q92791 437 aa7.56□□□□□ -1.2
UBR4-204ENST00000375254 SPDL1Q96EA4 605 aa7.56□□□□□ -1.2
UBR4-204ENST00000375254 MACROD2A1Z1Q3 448 aa7.56□□□□□ -1.2
UBR4-204ENST00000375254 KIAA1524Q8TCG1 905 aa7.56□□□□□ -1.2
UBR4-204ENST00000375254 HOXA7P31268 230 aaPredicted RBP7.56□□□□□ -1.2
UBR4-204ENST00000375254 NAA16Q6N069 864 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms