RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 IL25Q9H293 177 aa24.42■■□□□ 1.5
TMEFF1-201ENST00000374879 SMC3Q9UQE7 1217 aa24.42■■□□□ 1.5
TMEFF1-201ENST00000374879 AATKQ6ZMQ8 1374 aa24.42■■□□□ 1.5
TMEFF1-201ENST00000374879 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.41■■□□□ 1.5
TMEFF1-201ENST00000374879 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.41■■□□□ 1.5
TMEFF1-201ENST00000374879 BMS1Q14692 1282 aaKnown RBP24.41■■□□□ 1.5
TMEFF1-201ENST00000374879 ZFP91Q96JP5 570 aaPredicted RBP24.41■■□□□ 1.5
TMEFF1-201ENST00000374879 CCDC61Q9Y6R9 512 aa24.41■■□□□ 1.5
TMEFF1-201ENST00000374879 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.4■■□□□ 1.5
TMEFF1-201ENST00000374879 NUP62CLQ9H1M0 184 aa24.4■■□□□ 1.5
TMEFF1-201ENST00000374879 RAD50Q92878 1312 aa24.4■■□□□ 1.5
TMEFF1-201ENST00000374879 LIG1P18858 919 aa24.4■■□□□ 1.5
TMEFF1-201ENST00000374879 ARID5BQ14865 1188 aa24.4■■□□□ 1.5
TMEFF1-201ENST00000374879 NYAP1Q6ZVC0 841 aa24.4■■□□□ 1.5
TMEFF1-201ENST00000374879 CPS1P31327 1500 aa24.39■■□□□ 1.49
TMEFF1-201ENST00000374879 CCDC171Q6TFL3 1326 aa24.39■■□□□ 1.49
TMEFF1-201ENST00000374879 HSPA4P34932 840 aa24.39■■□□□ 1.49
TMEFF1-201ENST00000374879 AK2P54819 239 aa24.39■■□□□ 1.49
TMEFF1-201ENST00000374879 FHOD1Q9Y613 1164 aa24.39■■□□□ 1.49
TMEFF1-201ENST00000374879 FAM83GA6ND36 823 aa24.38■■□□□ 1.49
TMEFF1-201ENST00000374879 LMOD3Q0VAK6 560 aa24.38■■□□□ 1.49
TMEFF1-201ENST00000374879 MTMR6Q9Y217 621 aa24.38■■□□□ 1.49
TMEFF1-201ENST00000374879 EXOC6BQ9Y2D4 811 aa24.38■■□□□ 1.49
TMEFF1-201ENST00000374879 SSH2Q76I76 1423 aa24.38■■□□□ 1.49
TMEFF1-201ENST00000374879 SLU7O95391 586 aaKnown RBP24.38■■□□□ 1.49
TMEFF1-201ENST00000374879 RUFY3Q7L099 469 aa24.38■■□□□ 1.49
TMEFF1-201ENST00000374879 UNC5CLQ8IV45 518 aa24.38■■□□□ 1.49
TMEFF1-201ENST00000374879 LRRC8AQ8IWT6 810 aa24.38■■□□□ 1.49
TMEFF1-201ENST00000374879 SALL3Q9BXA9 1300 aa24.37■■□□□ 1.49
TMEFF1-201ENST00000374879 TTC14Q96N46 770 aa24.37■■□□□ 1.49
TMEFF1-201ENST00000374879 TRMT1Q9NXH9 659 aaKnown RBP24.37■■□□□ 1.49
TMEFF1-201ENST00000374879 HMMRO75330 724 aa24.36■■□□□ 1.49
TMEFF1-201ENST00000374879 H2AFXP16104 143 aaPredicted RBP24.36■■□□□ 1.49
TMEFF1-201ENST00000374879 DCTN1Q14203 1278 aa24.36■■□□□ 1.49
TMEFF1-201ENST00000374879 RGS22Q8NE09 1264 aa24.36■■□□□ 1.49
TMEFF1-201ENST00000374879 TDRD7Q8NHU6 1098 aaKnown RBP24.36■■□□□ 1.49
TMEFF1-201ENST00000374879 LIMCH1Q9UPQ0 1083 aa24.36■■□□□ 1.49
TMEFF1-201ENST00000374879 TTC6Q86TZ1 520 aa24.35■■□□□ 1.49
TMEFF1-201ENST00000374879 NEK11Q8NG66 645 aa24.35■■□□□ 1.49
TMEFF1-201ENST00000374879 DLG5Q8TDM6 1919 aa24.35■■□□□ 1.49
TMEFF1-201ENST00000374879 GJB2P29033 226 aa24.35■■□□□ 1.49
TMEFF1-201ENST00000374879 PLA2G4AP47712 749 aa24.35■■□□□ 1.49
TMEFF1-201ENST00000374879 LARGE1O95461 756 aa24.34■■□□□ 1.49
TMEFF1-201ENST00000374879 TNNT3P45378 269 aaPredicted RBP24.34■■□□□ 1.49
TMEFF1-201ENST00000374879 ERCC6LQ2NKX8 1250 aa24.34■■□□□ 1.49
TMEFF1-201ENST00000374879 NFATC2IPQ8NCF5 419 aa24.34■■□□□ 1.49
TMEFF1-201ENST00000374879 TNMDQ9H2S6 317 aa24.34■■□□□ 1.49
TMEFF1-201ENST00000374879 ESF1Q9H501 851 aaKnown RBP24.34■■□□□ 1.49
TMEFF1-201ENST00000374879 RSPH14Q9UHP6 348 aa24.34■■□□□ 1.49
TMEFF1-201ENST00000374879 MON2Q7Z3U7 1717 aa24.34■■□□□ 1.49
TMEFF1-201ENST00000374879 CLCN6P51797 869 aa24.33■■□□□ 1.49
TMEFF1-201ENST00000374879 SNX14Q9Y5W7 946 aa24.33■■□□□ 1.49
TMEFF1-201ENST00000374879 PTPRCP08575 1304 aa24.33■■□□□ 1.48
TMEFF1-201ENST00000374879 KIAA0232Q92628 1395 aa24.33■■□□□ 1.48
TMEFF1-201ENST00000374879 VPS37CA5D8V6 355 aaPredicted RBP24.32■■□□□ 1.48
TMEFF1-201ENST00000374879 SKILP12757 684 aa24.32■■□□□ 1.48
TMEFF1-201ENST00000374879 DACT1Q9NYF0 836 aa24.32■■□□□ 1.48
TMEFF1-201ENST00000374879 PNMA6AP0CW24 399 aaPredicted RBP24.32■■□□□ 1.48
TMEFF1-201ENST00000374879 CCDC83Q8IWF9 413 aa24.32■■□□□ 1.48
TMEFF1-201ENST00000374879 TUBGCP6Q96RT7 1819 aa24.32■■□□□ 1.48
TMEFF1-201ENST00000374879 ZNF165P49910 485 aa24.31■■□□□ 1.48
TMEFF1-201ENST00000374879 DNAJC25Q9H1X3 360 aa24.31■■□□□ 1.48
TMEFF1-201ENST00000374879 EFCC1Q9HA90 598 aa24.31■■□□□ 1.48
TMEFF1-201ENST00000374879 PRR36Q9H6K5 1346 aa24.31■■□□□ 1.48
TMEFF1-201ENST00000374879 CPA1P15085 419 aa24.31■■□□□ 1.48
TMEFF1-201ENST00000374879 LRRN4CLQ8ND94 238 aa24.31■■□□□ 1.48
TMEFF1-201ENST00000374879 POLR3GO15318 223 aaPredicted RBP24.31■■□□□ 1.48
TMEFF1-201ENST00000374879 RNF20Q5VTR2 975 aa24.31■■□□□ 1.48
TMEFF1-201ENST00000374879 SIRT1Q96EB6 747 aa24.31■■□□□ 1.48
TMEFF1-201ENST00000374879 TECPR2O15040 1411 aa24.3■■□□□ 1.48
TMEFF1-201ENST00000374879 SYT10Q6XYQ8 523 aa24.3■■□□□ 1.48
TMEFF1-201ENST00000374879 RASEFQ8IZ41 740 aa24.3■■□□□ 1.48
TMEFF1-201ENST00000374879 HDGFP51858 240 aaKnown RBP24.3■■□□□ 1.48
TMEFF1-201ENST00000374879 FAM173BQ6P4H8 233 aa24.3■■□□□ 1.48
TMEFF1-201ENST00000374879 LRRCC1Q9C099 1032 aa24.3■■□□□ 1.48
TMEFF1-201ENST00000374879 C3P01024 1663 aa24.29■■□□□ 1.48
TMEFF1-201ENST00000374879 HTATSF1O43719 755 aaKnown RBP24.29■■□□□ 1.48
TMEFF1-201ENST00000374879 CDC25BP30305 580 aa24.29■■□□□ 1.48
TMEFF1-201ENST00000374879 RASSF4Q9H2L5 321 aa24.29■■□□□ 1.48
TMEFF1-201ENST00000374879 KRBA2Q6ZNG9 492 aa24.29■■□□□ 1.48
TMEFF1-201ENST00000374879 CCAR2Q8N163 923 aaKnown RBP24.29■■□□□ 1.48
TMEFF1-201ENST00000374879 ITSN1Q15811 1721 aa24.28■■□□□ 1.48
TMEFF1-201ENST00000374879 TEX2Q8IWB9 1127 aa24.28■■□□□ 1.48
TMEFF1-201ENST00000374879 AKAP12Q02952 1782 aa24.28■■□□□ 1.48
TMEFF1-201ENST00000374879 SULT6B1Q6IMI4 303 aa24.27■■□□□ 1.48
TMEFF1-201ENST00000374879 NEMFO60524 1076 aa24.27■■□□□ 1.48
TMEFF1-201ENST00000374879 NOP2P46087 812 aaKnown RBP24.27■■□□□ 1.48
TMEFF1-201ENST00000374879 KRT85P78386 507 aa24.27■■□□□ 1.48
TMEFF1-201ENST00000374879 ST5P78524 1137 aa24.27■■□□□ 1.48
TMEFF1-201ENST00000374879 CCZ1BP86790 482 aa24.27■■□□□ 1.48
TMEFF1-201ENST00000374879 CCZ1P86791 482 aaPredicted RBP24.27■■□□□ 1.48
TMEFF1-201ENST00000374879 EIF4A2Q14240 407 aaKnown RBP24.27■■□□□ 1.48
TMEFF1-201ENST00000374879 MUM1L1Q5H9M0 696 aa24.27■■□□□ 1.48
TMEFF1-201ENST00000374879 TEX35Q5T0J7 233 aa24.27■■□□□ 1.48
TMEFF1-201ENST00000374879 TRIM66O15016 1216 aa24.26■■□□□ 1.47
TMEFF1-201ENST00000374879 FERMT3Q86UX7 667 aa24.26■■□□□ 1.47
TMEFF1-201ENST00000374879 TMX1Q9H3N1 280 aa24.26■■□□□ 1.47
TMEFF1-201ENST00000374879 CCDC69A6NI79 296 aa24.26■■□□□ 1.47
TMEFF1-201ENST00000374879 TXLNBQ8N3L3 684 aa24.26■■□□□ 1.47
TMEFF1-201ENST00000374879 RBM43Q6ZSC3 357 aaKnown RBP24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms