RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 KIAA0753Q2KHM9 967 aa9.6□□□□□ -0.87
HSPG2-203ENST00000374695 CCDC14Q49A88 953 aa9.6□□□□□ -0.87
HSPG2-203ENST00000374695 USH1CQ9Y6N9 552 aa9.6□□□□□ -0.87
HSPG2-203ENST00000374695 KIF1BPQ96EK5 621 aa9.6□□□□□ -0.87
HSPG2-203ENST00000374695 ALDH3A1P30838 453 aa9.6□□□□□ -0.87
HSPG2-203ENST00000374695 LRP2BPQ9P2M1 347 aa9.6□□□□□ -0.87
HSPG2-203ENST00000374695 MTHFSP49914 203 aa9.59□□□□□ -0.87
HSPG2-203ENST00000374695 RBM5P52756 815 aaKnown RBP eCLIP9.59□□□□□ -0.87
HSPG2-203ENST00000374695 CATIPQ7Z7H3 387 aa9.59□□□□□ -0.87
HSPG2-203ENST00000374695 KLHL34Q8N239 644 aa9.59□□□□□ -0.87
HSPG2-203ENST00000374695 GAPVD1Q14C86 1478 aa9.59□□□□□ -0.87
HSPG2-203ENST00000374695 MAP3K9P80192 1104 aa9.59□□□□□ -0.87
HSPG2-203ENST00000374695 MAP7D1Q3KQU3 841 aa9.59□□□□□ -0.87
HSPG2-203ENST00000374695 OGFRQ9NZT2 677 aa9.59□□□□□ -0.87
HSPG2-203ENST00000374695 CCDC160A6NGH7 325 aa9.59□□□□□ -0.87
HSPG2-203ENST00000374695 NLRP6P59044 892 aa9.59□□□□□ -0.87
HSPG2-203ENST00000374695 GABPB1Q06547 395 aaPredicted RBP9.59□□□□□ -0.87
HSPG2-203ENST00000374695 TDRD9Q8NDG6 1382 aaKnown RBP9.59□□□□□ -0.87
HSPG2-203ENST00000374695 CNGA1P29973 690 aa9.59□□□□□ -0.87
HSPG2-203ENST00000374695 KIAA1524Q8TCG1 905 aa9.59□□□□□ -0.87
HSPG2-203ENST00000374695 CASKIN1Q8WXD9 1431 aa9.59□□□□□ -0.87
HSPG2-203ENST00000374695 GMNNO75496 209 aa9.59□□□□□ -0.87
HSPG2-203ENST00000374695 TCP11L1Q9NUJ3 509 aa9.59□□□□□ -0.87
HSPG2-203ENST00000374695 HYPKQ9NX55 129 aa9.59□□□□□ -0.87
HSPG2-203ENST00000374695 SRGAP3O43295 1099 aa9.59□□□□□ -0.87
HSPG2-203ENST00000374695 PRKAR2BP31323 418 aa9.59□□□□□ -0.87
HSPG2-203ENST00000374695 ZNF622Q969S3 477 aaKnown RBP eCLIP9.59□□□□□ -0.87
HSPG2-203ENST00000374695 CCDC129Q6ZRS4 1044 aa9.58□□□□□ -0.88
HSPG2-203ENST00000374695 DZIP1Q86YF9 867 aaKnown RBP9.58□□□□□ -0.88
HSPG2-203ENST00000374695 TDRD12Q587J7 1177 aaKnown RBP9.58□□□□□ -0.88
HSPG2-203ENST00000374695 TACC1O75410 805 aa9.58□□□□□ -0.88
HSPG2-203ENST00000374695 NOP2P46087 812 aaKnown RBP9.58□□□□□ -0.88
HSPG2-203ENST00000374695 TTC31Q49AM3 519 aaPredicted RBP9.58□□□□□ -0.88
HSPG2-203ENST00000374695 TMC6Q7Z403 805 aa9.58□□□□□ -0.88
HSPG2-203ENST00000374695 MIPOL1Q8TD10 442 aa9.58□□□□□ -0.88
HSPG2-203ENST00000374695 JADE2Q9NQC1 790 aa9.58□□□□□ -0.88
HSPG2-203ENST00000374695 CTAGE9A4FU28 777 aa9.58□□□□□ -0.88
HSPG2-203ENST00000374695 EBAG9O00559 213 aa9.58□□□□□ -0.88
HSPG2-203ENST00000374695 USP5P45974 858 aa9.58□□□□□ -0.88
HSPG2-203ENST00000374695 ZNF652Q9Y2D9 606 aa9.58□□□□□ -0.88
HSPG2-203ENST00000374695 ERBINQ96RT1 1412 aa9.58□□□□□ -0.88
HSPG2-203ENST00000374695 CUL7Q14999 1698 aa9.58□□□□□ -0.88
HSPG2-203ENST00000374695 SCLT1Q96NL6 688 aa9.58□□□□□ -0.88
HSPG2-203ENST00000374695 ATP5DP30049 168 aa9.58□□□□□ -0.88
HSPG2-203ENST00000374695 ABCC11Q96J66 1382 aa9.58□□□□□ -0.88
HSPG2-203ENST00000374695 LIMCH1Q9UPQ0 1083 aa9.58□□□□□ -0.88
HSPG2-203ENST00000374695 BAG4O95429 457 aaKnown RBP9.58□□□□□ -0.88
HSPG2-203ENST00000374695 HMG20BQ9P0W2 317 aa9.58□□□□□ -0.88
HSPG2-203ENST00000374695 IQCA1Q86XH1 822 aa9.58□□□□□ -0.88
HSPG2-203ENST00000374695 FAM114A2Q9NRY5 505 aa9.58□□□□□ -0.88
HSPG2-203ENST00000374695 BMP15O95972 392 aa9.58□□□□□ -0.88
HSPG2-203ENST00000374695 SSRP1Q08945 709 aaKnown RBP9.58□□□□□ -0.88
HSPG2-203ENST00000374695 TSGA10Q9BZW7 698 aa9.58□□□□□ -0.88
HSPG2-203ENST00000374695 PRDM10Q9NQV6 1147 aa9.58□□□□□ -0.88
HSPG2-203ENST00000374695 ODF2LQ9ULJ1 636 aa9.58□□□□□ -0.88
HSPG2-203ENST00000374695 PTPN23Q9H3S7 1636 aa9.58□□□□□ -0.88
HSPG2-203ENST00000374695 KIF5AQ12840 1032 aa9.57□□□□□ -0.88
HSPG2-203ENST00000374695 ATP2A2P16615 1042 aaKnown RBP9.57□□□□□ -0.88
HSPG2-203ENST00000374695 LMBR1Q8WVP7 490 aa9.57□□□□□ -0.88
HSPG2-203ENST00000374695 NAPBQ9H115 298 aa9.57□□□□□ -0.88
HSPG2-203ENST00000374695 UBE2HP62256 183 aa9.57□□□□□ -0.88
HSPG2-203ENST00000374695 ERCC6LQ2NKX8 1250 aa9.57□□□□□ -0.88
HSPG2-203ENST00000374695 CYLC1P35663 651 aaPredicted RBP9.57□□□□□ -0.88
HSPG2-203ENST00000374695 PPM1FP49593 454 aaPredicted RBP9.57□□□□□ -0.88
HSPG2-203ENST00000374695 UBA5Q9GZZ9 404 aa9.57□□□□□ -0.88
HSPG2-203ENST00000374695 SLC12A7Q9Y666 1083 aa9.57□□□□□ -0.88
HSPG2-203ENST00000374695 A0A1B0GUA9 196 aa9.57□□□□□ -0.88
HSPG2-203ENST00000374695 ZBTB16Q05516 673 aa9.57□□□□□ -0.88
HSPG2-203ENST00000374695 CCDC194A0A1B0GVG4 234 aa9.57□□□□□ -0.88
HSPG2-203ENST00000374695 CCDC40Q4G0X9 1142 aa9.57□□□□□ -0.88
HSPG2-203ENST00000374695 ERMNQ8TAM6 284 aa9.57□□□□□ -0.88
HSPG2-203ENST00000374695 GOLGA1Q92805 767 aa9.57□□□□□ -0.88
HSPG2-203ENST00000374695 LACTBP83111 547 aaPredicted RBP9.57□□□□□ -0.88
HSPG2-203ENST00000374695 EIF2AK4Q9P2K8 1649 aaKnown RBP9.57□□□□□ -0.88
HSPG2-203ENST00000374695 SYNCQ9H7C4 482 aa9.57□□□□□ -0.88
HSPG2-203ENST00000374695 CIB2O75838 187 aa9.57□□□□□ -0.88
HSPG2-203ENST00000374695 CABP4P57796 275 aa9.57□□□□□ -0.88
HSPG2-203ENST00000374695 PRPF4BQ13523 1007 aaKnown RBP9.57□□□□□ -0.88
HSPG2-203ENST00000374695 NUTM1Q86Y26 1132 aa9.57□□□□□ -0.88
HSPG2-203ENST00000374695 JPH4Q96JJ6 628 aa9.57□□□□□ -0.88
HSPG2-203ENST00000374695 NCOA2Q15596 1464 aa9.57□□□□□ -0.88
HSPG2-203ENST00000374695 MRPS9P82933 396 aaKnown RBP9.57□□□□□ -0.88
HSPG2-203ENST00000374695 RPAP2Q8IXW5 612 aaPredicted RBP9.57□□□□□ -0.88
HSPG2-203ENST00000374695 WDR97A6NE52 1622 aa9.57□□□□□ -0.88
HSPG2-203ENST00000374695 IFT74Q96LB3 600 aa9.56□□□□□ -0.88
HSPG2-203ENST00000374695 MX1P20591 662 aa9.56□□□□□ -0.88
HSPG2-203ENST00000374695 EXOSC9Q06265 439 aaKnown RBP9.56□□□□□ -0.88
HSPG2-203ENST00000374695 SIL1Q9H173 461 aa9.56□□□□□ -0.88
HSPG2-203ENST00000374695 ATAD2Q6PL18 1390 aa9.56□□□□□ -0.88
HSPG2-203ENST00000374695 GOLGA8BA8MQT2 603 aa9.56□□□□□ -0.88
HSPG2-203ENST00000374695 PUS7Q96PZ0 661 aaKnown RBP9.56□□□□□ -0.88
HSPG2-203ENST00000374695 FAM184BQ9ULE4 1060 aa9.56□□□□□ -0.88
HSPG2-203ENST00000374695 B4GALNT4Q76KP1 1039 aa9.56□□□□□ -0.88
HSPG2-203ENST00000374695 ZSCAN29Q8IWY8 852 aaPredicted RBP9.56□□□□□ -0.88
HSPG2-203ENST00000374695 MPNDQ8N594 471 aa9.56□□□□□ -0.88
HSPG2-203ENST00000374695 ARFGAP2Q8N6H7 521 aa9.56□□□□□ -0.88
HSPG2-203ENST00000374695 TPD52P55327 224 aaPredicted RBP9.56□□□□□ -0.88
HSPG2-203ENST00000374695 XPCQ01831 940 aaPredicted RBP9.56□□□□□ -0.88
HSPG2-203ENST00000374695 CACNA2D3Q8IZS8 1091 aa9.56□□□□□ -0.88
HSPG2-203ENST00000374695 FSIP1Q8NA03 581 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms