RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 MAP3K15Q6ZN16 1313 aa19.27■□□□□ 0.68
HSPG2-201ENST00000374673 ANKRD36CQ5JPF3 1778 aa19.27■□□□□ 0.68
HSPG2-201ENST00000374673 ERVV-1B6SEH8 477 aa19.27■□□□□ 0.68
HSPG2-201ENST00000374673 TCERG1O14776 1098 aaKnown RBP19.27■□□□□ 0.68
HSPG2-201ENST00000374673 SLC4A2P04920 1241 aa19.27■□□□□ 0.68
HSPG2-201ENST00000374673 NLGN1Q8N2Q7 840 aa19.27■□□□□ 0.68
HSPG2-201ENST00000374673 ARXQ96QS3 562 aa19.27■□□□□ 0.68
HSPG2-201ENST00000374673 PHAXQ9H814 394 aaKnown RBP19.27■□□□□ 0.68
HSPG2-201ENST00000374673 FKBP8Q14318 412 aa19.26■□□□□ 0.67
HSPG2-201ENST00000374673 ALDH1L2Q3SY69 923 aa19.26■□□□□ 0.67
HSPG2-201ENST00000374673 CLEC4GQ6UXB4 293 aa19.26■□□□□ 0.67
HSPG2-201ENST00000374673 SPON1Q9HCB6 807 aa19.26■□□□□ 0.67
HSPG2-201ENST00000374673 AIMP1Q12904 312 aaKnown RBP19.25■□□□□ 0.67
HSPG2-201ENST00000374673 MSL1Q68DK7 614 aa19.25■□□□□ 0.67
HSPG2-201ENST00000374673 SGIP1Q9BQI5 828 aa19.25■□□□□ 0.67
HSPG2-201ENST00000374673 ATF5Q9Y2D1 282 aaPredicted RBP19.25■□□□□ 0.67
HSPG2-201ENST00000374673 ZNF652Q9Y2D9 606 aa19.25■□□□□ 0.67
HSPG2-201ENST00000374673 ZBTB3Q9H5J0 574 aa19.24■□□□□ 0.67
HSPG2-201ENST00000374673 PTGER2P43116 358 aa19.23■□□□□ 0.67
HSPG2-201ENST00000374673 HLFQ16534 295 aa19.23■□□□□ 0.67
HSPG2-201ENST00000374673 GIGYF2Q6Y7W6 1299 aaKnown RBP19.23■□□□□ 0.67
HSPG2-201ENST00000374673 ANKRD13DQ6ZTN6 518 aa19.23■□□□□ 0.67
HSPG2-201ENST00000374673 G2E3Q7L622 706 aa19.23■□□□□ 0.67
HSPG2-201ENST00000374673 PLBD2Q8NHP8 589 aa19.23■□□□□ 0.67
HSPG2-201ENST00000374673 SSH1Q8WYL5 1049 aa19.23■□□□□ 0.67
HSPG2-201ENST00000374673 ATP10DQ9P241 1426 aa19.23■□□□□ 0.67
HSPG2-201ENST00000374673 NRXN2Q9P2S2 1712 aa19.22■□□□□ 0.67
HSPG2-201ENST00000374673 TM4SF1P30408 202 aa19.22■□□□□ 0.67
HSPG2-201ENST00000374673 FLIIQ13045 1269 aa19.22■□□□□ 0.67
HSPG2-201ENST00000374673 MRPL50Q8N5N7 158 aaKnown RBP19.22■□□□□ 0.67
HSPG2-201ENST00000374673 AFDNP55196 1824 aaKnown RBP19.22■□□□□ 0.67
HSPG2-201ENST00000374673 DDX58O95786 925 aaKnown RBP19.21■□□□□ 0.67
HSPG2-201ENST00000374673 POLD1P28340 1107 aa19.21■□□□□ 0.67
HSPG2-201ENST00000374673 RARSP54136 660 aaKnown RBP19.21■□□□□ 0.67
HSPG2-201ENST00000374673 NFIXQ14938 502 aa19.21■□□□□ 0.67
HSPG2-201ENST00000374673 TBC1D9BQ66K14 1250 aa19.21■□□□□ 0.67
HSPG2-201ENST00000374673 MMP10P09238 476 aa19.2■□□□□ 0.66
HSPG2-201ENST00000374673 BRPF1P55201 1214 aaPredicted RBP19.2■□□□□ 0.66
HSPG2-201ENST00000374673 HSP90AB3PQ58FF7 597 aa19.2■□□□□ 0.66
HSPG2-201ENST00000374673 SMC4Q9NTJ3 1288 aa19.2■□□□□ 0.66
HSPG2-201ENST00000374673 KSR2Q6VAB6 950 aa19.19■□□□□ 0.66
HSPG2-201ENST00000374673 RIC3Q7Z5B4 369 aa19.19■□□□□ 0.66
HSPG2-201ENST00000374673 BCL2L13Q9BXK5 485 aa19.19■□□□□ 0.66
HSPG2-201ENST00000374673 ADCY9O60503 1353 aa19.19■□□□□ 0.66
HSPG2-201ENST00000374673 CARMIL3Q8ND23 1372 aa19.19■□□□□ 0.66
HSPG2-201ENST00000374673 POLRMTO00411 1230 aaKnown RBP19.18■□□□□ 0.66
HSPG2-201ENST00000374673 DDR1Q08345 913 aa19.18■□□□□ 0.66
HSPG2-201ENST00000374673 FKBP5Q13451 457 aaPredicted RBP19.18■□□□□ 0.66
HSPG2-201ENST00000374673 ZNF34Q8IZ26 560 aa19.18■□□□□ 0.66
HSPG2-201ENST00000374673 PARP3Q9Y6F1 533 aa19.18■□□□□ 0.66
HSPG2-201ENST00000374673 KIF13BQ9NQT8 1826 aa19.17■□□□□ 0.66
HSPG2-201ENST00000374673 PI4KAP2A4QPH2 592 aa19.17■□□□□ 0.66
HSPG2-201ENST00000374673 TCIRG1Q13488 830 aa19.17■□□□□ 0.66
HSPG2-201ENST00000374673 BICDL1Q6ZP65 573 aa19.17■□□□□ 0.66
HSPG2-201ENST00000374673 PI4KAP1Q8N8J0 262 aa19.17■□□□□ 0.66
HSPG2-201ENST00000374673 SETDB2Q96T68 719 aa19.17■□□□□ 0.66
HSPG2-201ENST00000374673 NIP7Q9Y221 180 aaKnown RBP eCLIP19.17■□□□□ 0.66
HSPG2-201ENST00000374673 PTPRCP08575 1304 aa19.17■□□□□ 0.66
HSPG2-201ENST00000374673 MAP3K2Q9Y2U5 619 aa19.16■□□□□ 0.66
HSPG2-201ENST00000374673 ISCA1Q9BUE6 129 aa19.15■□□□□ 0.66
HSPG2-201ENST00000374673 METTL22Q9BUU2 404 aaPredicted RBP19.15■□□□□ 0.66
HSPG2-201ENST00000374673 UBN2Q6ZU65 1347 aa19.15■□□□□ 0.66
HSPG2-201ENST00000374673 KIF16BQ96L93 1317 aa19.15■□□□□ 0.66
HSPG2-201ENST00000374673 IBTKQ9P2D0 1353 aaPredicted RBP19.15■□□□□ 0.66
HSPG2-201ENST00000374673 N4BP2Q86UW6 1770 aaPredicted RBP19.14■□□□□ 0.66
HSPG2-201ENST00000374673 SERPINB2P05120 415 aa19.14■□□□□ 0.65
HSPG2-201ENST00000374673 PARP10Q53GL7 1025 aa19.14■□□□□ 0.65
HSPG2-201ENST00000374673 DNAAF4Q8WXU2 420 aa19.14■□□□□ 0.65
HSPG2-201ENST00000374673 GPTP24298 496 aa19.13■□□□□ 0.65
HSPG2-201ENST00000374673 TRIM28Q13263 835 aaKnown RBP19.13■□□□□ 0.65
HSPG2-201ENST00000374673 MYD88Q99836 296 aa19.13■□□□□ 0.65
HSPG2-201ENST00000374673 C10orf71Q711Q0 1435 aa19.13■□□□□ 0.65
HSPG2-201ENST00000374673 PXDNLA1KZ92 1463 aa19.12■□□□□ 0.65
HSPG2-201ENST00000374673 BCAR3O75815 825 aa19.12■□□□□ 0.65
HSPG2-201ENST00000374673 NLRP10Q86W26 655 aa19.12■□□□□ 0.65
HSPG2-201ENST00000374673 ANKRD31Q8N7Z5 1873 aa19.11■□□□□ 0.65
HSPG2-201ENST00000374673 F6X3S4 739 aa19.11■□□□□ 0.65
HSPG2-201ENST00000374673 NEXNQ0ZGT2 675 aa19.11■□□□□ 0.65
HSPG2-201ENST00000374673 SUSD4Q5VX71 490 aa19.11■□□□□ 0.65
HSPG2-201ENST00000374673 PPP1R42Q7Z4L9 355 aa19.11■□□□□ 0.65
HSPG2-201ENST00000374673 ARHGAP45Q92619 1136 aa19.11■□□□□ 0.65
HSPG2-201ENST00000374673 NYXQ9GZU5 481 aa19.11■□□□□ 0.65
HSPG2-201ENST00000374673 PPP1R1BQ9UD71 204 aaPredicted RBP19.11■□□□□ 0.65
HSPG2-201ENST00000374673 NOB1Q9ULX3 412 aaKnown RBP19.11■□□□□ 0.65
HSPG2-201ENST00000374673 ATP5J2-PTCD1G3V325 749 aa19.1■□□□□ 0.65
HSPG2-201ENST00000374673 PRR5LQ6MZQ0 368 aa19.1■□□□□ 0.65
HSPG2-201ENST00000374673 TPTE2Q6XPS3 522 aa19.1■□□□□ 0.65
HSPG2-201ENST00000374673 NBPF5PQ86XG9 351 aaPredicted RBP19.1■□□□□ 0.65
HSPG2-201ENST00000374673 RCAN3Q9UKA8 241 aa19.1■□□□□ 0.65
HSPG2-201ENST00000374673 KIAA1551Q9HCM1 1747 aa19.1■□□□□ 0.65
HSPG2-201ENST00000374673 RNF123Q5XPI4 1314 aa19.09■□□□□ 0.65
HSPG2-201ENST00000374673 NTSR2O95665 410 aa19.09■□□□□ 0.65
HSPG2-201ENST00000374673 IGKV5-2P06315 115 aa19.09■□□□□ 0.65
HSPG2-201ENST00000374673 CNBD1Q8NA66 436 aa19.09■□□□□ 0.65
HSPG2-201ENST00000374673 CCDC191Q8NCU4 936 aa19.09■□□□□ 0.65
HSPG2-201ENST00000374673 API5Q9BZZ5 524 aaKnown RBP19.09■□□□□ 0.65
HSPG2-201ENST00000374673 LAMB2P55268 1798 aa19.09■□□□□ 0.65
HSPG2-201ENST00000374673 IPO8O15397 1037 aaKnown RBP19.08■□□□□ 0.64
HSPG2-201ENST00000374673 BEND3Q5T5X7 828 aa19.08■□□□□ 0.64
HSPG2-201ENST00000374673 LINS1Q8NG48 757 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 150.9 ms