RNA–Protein interactions for RNA: ENST00000374358.4

TMEM50A-201, Transcript of transmembrane protein 50A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50A, Length 2,683 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-201ENST00000374358 KSR2Q6VAB6 950 aa18.83■□□□□ 0.61
TMEM50A-201ENST00000374358 CLASRPQ8N2M8 674 aaKnown RBP18.83■□□□□ 0.61
TMEM50A-201ENST00000374358 SUCLG2Q96I99 432 aa18.83■□□□□ 0.61
TMEM50A-201ENST00000374358 SIL1Q9H173 461 aa18.83■□□□□ 0.61
TMEM50A-201ENST00000374358 COL9A3Q14050 684 aaPredicted RBP18.83■□□□□ 0.6
TMEM50A-201ENST00000374358 RPAP1Q9BWH6 1393 aaPredicted RBP18.82■□□□□ 0.6
TMEM50A-201ENST00000374358 MYL6BP14649 208 aa18.82■□□□□ 0.6
TMEM50A-201ENST00000374358 RUFY3Q7L099 469 aa18.82■□□□□ 0.6
TMEM50A-201ENST00000374358 BICC1Q9H694 974 aaKnown RBP18.82■□□□□ 0.6
TMEM50A-201ENST00000374358 TLR7Q9NYK1 1049 aaKnown RBP18.82■□□□□ 0.6
TMEM50A-201ENST00000374358 ADCK5Q3MIX3 580 aa18.82■□□□□ 0.6
TMEM50A-201ENST00000374358 AACSQ86V21 672 aa18.82■□□□□ 0.6
TMEM50A-201ENST00000374358 JARID2Q92833 1246 aaPredicted RBP18.82■□□□□ 0.6
TMEM50A-201ENST00000374358 IL17RAQ96F46 866 aa18.82■□□□□ 0.6
TMEM50A-201ENST00000374358 DIAPH3Q9NSV4 1193 aa18.82■□□□□ 0.6
TMEM50A-201ENST00000374358 CASTP20810 708 aaKnown RBP18.81■□□□□ 0.6
TMEM50A-201ENST00000374358 KIAA1211Q6ZU35 1233 aa18.81■□□□□ 0.6
TMEM50A-201ENST00000374358 ANP32BQ92688 251 aaKnown RBP18.81■□□□□ 0.6
TMEM50A-201ENST00000374358 TTC14Q96N46 770 aa18.81■□□□□ 0.6
TMEM50A-201ENST00000374358 GLRX3O76003 335 aaKnown RBP18.81■□□□□ 0.6
TMEM50A-201ENST00000374358 CCDC8Q9H0W5 538 aaPredicted RBP18.81■□□□□ 0.6
TMEM50A-201ENST00000374358 PHRF1Q9P1Y6 1649 aaKnown RBP18.8■□□□□ 0.6
TMEM50A-201ENST00000374358 IFIT2P09913 472 aaKnown RBP18.8■□□□□ 0.6
TMEM50A-201ENST00000374358 MTX1Q13505 466 aa18.8■□□□□ 0.6
TMEM50A-201ENST00000374358 HSP90AB4PQ58FF6 505 aa18.8■□□□□ 0.6
TMEM50A-201ENST00000374358 PRPF40BQ6NWY9 871 aaKnown RBP18.8■□□□□ 0.6
TMEM50A-201ENST00000374358 KRT28Q7Z3Y7 464 aa18.8■□□□□ 0.6
TMEM50A-201ENST00000374358 ECHDC1Q9NTX5 307 aa18.8■□□□□ 0.6
TMEM50A-201ENST00000374358 SASH1O94885 1247 aa18.79■□□□□ 0.6
TMEM50A-201ENST00000374358 PDIA6Q15084 440 aa18.79■□□□□ 0.6
TMEM50A-201ENST00000374358 LRSAM1Q6UWE0 723 aa18.79■□□□□ 0.6
TMEM50A-201ENST00000374358 HEG1Q9ULI3 1381 aa18.79■□□□□ 0.6
TMEM50A-201ENST00000374358 GRM8O00222 908 aa18.79■□□□□ 0.6
TMEM50A-201ENST00000374358 EAF2Q96CJ1 260 aaPredicted RBP18.79■□□□□ 0.6
TMEM50A-201ENST00000374358 FAM227BQ96M60 508 aa18.79■□□□□ 0.6
TMEM50A-201ENST00000374358 CRYBG1Q9Y4K1 1723 aa18.79■□□□□ 0.6
TMEM50A-201ENST00000374358 TTC41PQ6P2S7 1318 aa18.79■□□□□ 0.6
TMEM50A-201ENST00000374358 USP42Q9H9J4 1324 aaKnown RBP18.78■□□□□ 0.6
TMEM50A-201ENST00000374358 SLIT3O75094 1523 aa18.78■□□□□ 0.6
TMEM50A-201ENST00000374358 ALDH1L1O75891 902 aa18.78■□□□□ 0.6
TMEM50A-201ENST00000374358 IGKV5-2P06315 115 aa18.78■□□□□ 0.6
TMEM50A-201ENST00000374358 USP48Q86UV5 1035 aa18.78■□□□□ 0.6
TMEM50A-201ENST00000374358 ERBB3P21860 1342 aa18.78■□□□□ 0.6
TMEM50A-201ENST00000374358 JAKMIP1Q96N16 626 aaKnown RBP18.77■□□□□ 0.6
TMEM50A-201ENST00000374358 NLRP2Q9NX02 1062 aa18.77■□□□□ 0.6
TMEM50A-201ENST00000374358 CNPY2Q9Y2B0 182 aa18.77■□□□□ 0.6
TMEM50A-201ENST00000374358 NCAPD2Q15021 1401 aa18.77■□□□□ 0.6
TMEM50A-201ENST00000374358 LINS1Q8NG48 757 aa18.77■□□□□ 0.6
TMEM50A-201ENST00000374358 NPHP4O75161 1426 aaPredicted RBP18.77■□□□□ 0.6
TMEM50A-201ENST00000374358 NFATC2IPQ8NCF5 419 aa18.77■□□□□ 0.59
TMEM50A-201ENST00000374358 HYPKQ9NX55 129 aa18.77■□□□□ 0.59
TMEM50A-201ENST00000374358 MBD3O95983 291 aa18.76■□□□□ 0.59
TMEM50A-201ENST00000374358 EPHA10Q5JZY3 1008 aa18.76■□□□□ 0.59
TMEM50A-201ENST00000374358 RIC3Q7Z5B4 369 aa18.76■□□□□ 0.59
TMEM50A-201ENST00000374358 CCDC83Q8IWF9 413 aa18.76■□□□□ 0.59
TMEM50A-201ENST00000374358 CABLES1Q8TDN4 633 aa18.76■□□□□ 0.59
TMEM50A-201ENST00000374358 DDX21Q9NR30 783 aaKnown RBP eCLIP18.76■□□□□ 0.59
TMEM50A-201ENST00000374358 WDR33Q9C0J8 1336 aaKnown RBP18.76■□□□□ 0.59
TMEM50A-201ENST00000374358 ZNF790Q6PG37 636 aa18.76■□□□□ 0.59
TMEM50A-201ENST00000374358 EDC3Q96F86 508 aaKnown RBP18.76■□□□□ 0.59
TMEM50A-201ENST00000374358 BOLA2Q9H3K6 86 aa18.76■□□□□ 0.59
TMEM50A-201ENST00000374358 LIMCH1Q9UPQ0 1083 aa18.76■□□□□ 0.59
TMEM50A-201ENST00000374358 SIPA1L3O60292 1781 aaPredicted RBP18.76■□□□□ 0.59
TMEM50A-201ENST00000374358 SYT1P21579 422 aa18.75■□□□□ 0.59
TMEM50A-201ENST00000374358 PROSER2Q86WR7 435 aaPredicted RBP18.75■□□□□ 0.59
TMEM50A-201ENST00000374358 TCEANC2Q96MN5 208 aa18.75■□□□□ 0.59
TMEM50A-201ENST00000374358 ZNF142P52746 1687 aaPredicted RBP18.75■□□□□ 0.59
TMEM50A-201ENST00000374358 KDM6AO15550 1401 aaPredicted RBP18.75■□□□□ 0.59
TMEM50A-201ENST00000374358 C5P01031 1676 aa18.75■□□□□ 0.59
TMEM50A-201ENST00000374358 XAGE3Q8WTP9 111 aa18.75■□□□□ 0.59
TMEM50A-201ENST00000374358 TAF6LQ9Y6J9 622 aa18.75■□□□□ 0.59
TMEM50A-201ENST00000374358 NDUFB9Q9Y6M9 179 aa18.75■□□□□ 0.59
TMEM50A-201ENST00000374358 NMIQ13287 307 aaPredicted RBP18.74■□□□□ 0.59
TMEM50A-201ENST00000374358 ZSCAN30Q86W11 494 aa18.74■□□□□ 0.59
TMEM50A-201ENST00000374358 CHMP4AQ9BY43 222 aa18.74■□□□□ 0.59
TMEM50A-201ENST00000374358 TRPM3Q9HCF6 1732 aaPredicted RBP18.74■□□□□ 0.59
TMEM50A-201ENST00000374358 EPB41L2O43491 1005 aaKnown RBP18.73■□□□□ 0.59
TMEM50A-201ENST00000374358 G3BP1Q13283 466 aaKnown RBP eCLIP18.73■□□□□ 0.594e-6■■■■□ 21.1
TMEM50A-201ENST00000374358 COPS6Q7L5N1 327 aa18.73■□□□□ 0.59
TMEM50A-201ENST00000374358 NECAB1Q8N987 351 aa18.73■□□□□ 0.59
TMEM50A-201ENST00000374358 ZNF496Q96IT1 587 aaPredicted RBP18.73■□□□□ 0.59
TMEM50A-201ENST00000374358 MYD88Q99836 296 aa18.73■□□□□ 0.59
TMEM50A-201ENST00000374358 A0A0D9SFI3 127 aa18.73■□□□□ 0.59
TMEM50A-201ENST00000374358 FIBPO43427 364 aa18.73■□□□□ 0.59
TMEM50A-201ENST00000374358 CHGBP05060 677 aa18.73■□□□□ 0.59
TMEM50A-201ENST00000374358 ST3GAL1Q11201 340 aa18.73■□□□□ 0.59
TMEM50A-201ENST00000374358 CHRNA2Q15822 529 aa18.73■□□□□ 0.59
TMEM50A-201ENST00000374358 RAPGEF4Q8WZA2 1011 aa18.73■□□□□ 0.59
TMEM50A-201ENST00000374358 GPATCH3Q96I76 525 aa18.73■□□□□ 0.59
TMEM50A-201ENST00000374358 PDLIM2Q96JY6 352 aa18.73■□□□□ 0.59
TMEM50A-201ENST00000374358 STX6O43752 255 aa18.72■□□□□ 0.59
TMEM50A-201ENST00000374358 ZSCAN22P10073 491 aaPredicted RBP18.72■□□□□ 0.59
TMEM50A-201ENST00000374358 ERC1Q8IUD2 1116 aa18.72■□□□□ 0.59
TMEM50A-201ENST00000374358 PDRG1Q9NUG6 133 aa18.72■□□□□ 0.59
TMEM50A-201ENST00000374358 SMC3Q9UQE7 1217 aa18.72■□□□□ 0.59
TMEM50A-201ENST00000374358 RBM8AQ9Y5S9 174 aaKnown RBP18.72■□□□□ 0.59
TMEM50A-201ENST00000374358 USP16Q9Y5T5 823 aa18.72■□□□□ 0.59
TMEM50A-201ENST00000374358 CCDC171Q6TFL3 1326 aa18.72■□□□□ 0.59
TMEM50A-201ENST00000374358 NPHP3Q7Z494 1330 aa18.72■□□□□ 0.59
TMEM50A-201ENST00000374358 DDX58O95786 925 aaKnown RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms