RNA–Protein interactions for RNA: ENST00000373571.5

HDAC8-206, Transcript of histone deacetylase 8, humanhuman

TSL 5 BASIC

Gene HDAC8, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-206ENST00000373571 GPT2Q8TD30 523 aa20.23■□□□□ 0.83
HDAC8-206ENST00000373571 SCN11AQ9UI33 1791 aa20.23■□□□□ 0.83
HDAC8-206ENST00000373571 C5P01031 1676 aa20.23■□□□□ 0.83
HDAC8-206ENST00000373571 PDIA6Q15084 440 aa20.23■□□□□ 0.83
HDAC8-206ENST00000373571 SUCLG2Q96I99 432 aa20.23■□□□□ 0.83
HDAC8-206ENST00000373571 ECHDC1Q9NTX5 307 aa20.23■□□□□ 0.83
HDAC8-206ENST00000373571 SNX14Q9Y5W7 946 aa20.23■□□□□ 0.83
HDAC8-206ENST00000373571 IFIT2P09913 472 aaKnown RBP20.22■□□□□ 0.83
HDAC8-206ENST00000373571 NASPP49321 788 aaPredicted RBP20.22■□□□□ 0.83
HDAC8-206ENST00000373571 SLC39A6Q13433 755 aa20.22■□□□□ 0.83
HDAC8-206ENST00000373571 ZNF790Q6PG37 636 aa20.22■□□□□ 0.83
HDAC8-206ENST00000373571 GPATCH3Q96I76 525 aa20.22■□□□□ 0.83
HDAC8-206ENST00000373571 NLRP2Q9NX02 1062 aa20.22■□□□□ 0.83
HDAC8-206ENST00000373571 UTYO14607 1347 aa20.22■□□□□ 0.83
HDAC8-206ENST00000373571 KDM6AO15550 1401 aaPredicted RBP20.22■□□□□ 0.83
HDAC8-206ENST00000373571 SLC52A2Q9HAB3 445 aa20.21■□□□□ 0.83
HDAC8-206ENST00000373571 DIAPH3Q9NSV4 1193 aa20.21■□□□□ 0.83
HDAC8-206ENST00000373571 NPHP3Q7Z494 1330 aa20.21■□□□□ 0.83
HDAC8-206ENST00000373571 SPG7Q9UQ90 795 aa20.21■□□□□ 0.83
HDAC8-206ENST00000373571 TATP17735 454 aaPredicted RBP20.2■□□□□ 0.82
HDAC8-206ENST00000373571 KAZALD1Q96I82 304 aa20.2■□□□□ 0.82
HDAC8-206ENST00000373571 BICC1Q9H694 974 aaKnown RBP20.2■□□□□ 0.82
HDAC8-206ENST00000373571 RIC3Q7Z5B4 369 aa20.2■□□□□ 0.82
HDAC8-206ENST00000373571 AACSQ86V21 672 aa20.2■□□□□ 0.82
HDAC8-206ENST00000373571 RUFY2Q8WXA3 655 aa20.2■□□□□ 0.82
HDAC8-206ENST00000373571 TRIM44Q96DX7 344 aaPredicted RBP20.2■□□□□ 0.82
HDAC8-206ENST00000373571 PHKG2P15735 406 aa20.19■□□□□ 0.82
HDAC8-206ENST00000373571 RASEFQ8IZ41 740 aa20.19■□□□□ 0.82
HDAC8-206ENST00000373571 ANO8Q9HCE9 1232 aaPredicted RBP20.19■□□□□ 0.82
HDAC8-206ENST00000373571 RBM27Q9P2N5 1060 aaKnown RBP20.19■□□□□ 0.82
HDAC8-206ENST00000373571 MEGF6O75095 1541 aa20.18■□□□□ 0.82
HDAC8-206ENST00000373571 IGKV5-2P06315 115 aa20.18■□□□□ 0.82
HDAC8-206ENST00000373571 MYL6BP14649 208 aa20.18■□□□□ 0.82
HDAC8-206ENST00000373571 ATF3P18847 181 aa20.18■□□□□ 0.82
HDAC8-206ENST00000373571 G3BP1Q13283 466 aaKnown RBP eCLIP20.18■□□□□ 0.82
HDAC8-206ENST00000373571 LARP1Q6PKG0 1096 aaKnown RBP20.18■□□□□ 0.82
HDAC8-206ENST00000373571 NFATC2IPQ8NCF5 419 aa20.18■□□□□ 0.82
HDAC8-206ENST00000373571 TTC14Q96N46 770 aa20.18■□□□□ 0.82
HDAC8-206ENST00000373571 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.18■□□□□ 0.82
HDAC8-206ENST00000373571 CCDC173Q0VFZ6 552 aa20.17■□□□□ 0.82
HDAC8-206ENST00000373571 DDX17Q92841 729 aaKnown RBP20.17■□□□□ 0.82
HDAC8-206ENST00000373571 SASH1O94885 1247 aa20.17■□□□□ 0.82
HDAC8-206ENST00000373571 CLCN1P35523 988 aa20.17■□□□□ 0.82
HDAC8-206ENST00000373571 NEXNQ0ZGT2 675 aa20.17■□□□□ 0.82
HDAC8-206ENST00000373571 ANP32BQ92688 251 aaKnown RBP20.17■□□□□ 0.82
HDAC8-206ENST00000373571 EVI5LQ96CN4 794 aa20.17■□□□□ 0.82
HDAC8-206ENST00000373571 COL18A1P39060 1754 aa20.16■□□□□ 0.82
HDAC8-206ENST00000373571 AK2P54819 239 aa20.16■□□□□ 0.82
HDAC8-206ENST00000373571 MBD3O95983 291 aa20.15■□□□□ 0.82
HDAC8-206ENST00000373571 CSB-PGBD3P0DP91 1061 aa20.15■□□□□ 0.82
HDAC8-206ENST00000373571 IFNL2Q8IZJ0 200 aa20.15■□□□□ 0.82
HDAC8-206ENST00000373571 XAGE3Q8WTP9 111 aa20.15■□□□□ 0.82
HDAC8-206ENST00000373571 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.15■□□□□ 0.821e-6■■□□□ 14.2
HDAC8-206ENST00000373571 TMEM63CQ9P1W3 806 aa20.15■□□□□ 0.82
HDAC8-206ENST00000373571 NSFL1CQ9UNZ2 370 aaKnown RBP20.15■□□□□ 0.82
HDAC8-206ENST00000373571 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.15■□□□□ 0.82
HDAC8-206ENST00000373571 WDR33Q9C0J8 1336 aaKnown RBP20.15■□□□□ 0.82
HDAC8-206ENST00000373571 NEURL1BA8MQ27 555 aa20.15■□□□□ 0.82
HDAC8-206ENST00000373571 PTH1RQ03431 593 aa20.15■□□□□ 0.82
HDAC8-206ENST00000373571 EAF2Q96CJ1 260 aaPredicted RBP20.15■□□□□ 0.82
HDAC8-206ENST00000373571 ABCC6O95255 1503 aa20.15■□□□□ 0.82
HDAC8-206ENST00000373571 ESPNB1AK53 854 aa20.14■□□□□ 0.81
HDAC8-206ENST00000373571 COPS6Q7L5N1 327 aa20.14■□□□□ 0.81
HDAC8-206ENST00000373571 ZNF496Q96IT1 587 aaPredicted RBP20.14■□□□□ 0.81
HDAC8-206ENST00000373571 PPP1R9BQ96SB3 815 aa20.14■□□□□ 0.81
HDAC8-206ENST00000373571 LIMCH1Q9UPQ0 1083 aa20.14■□□□□ 0.81
HDAC8-206ENST00000373571 TMEM94Q12767 1356 aa20.14■□□□□ 0.81
HDAC8-206ENST00000373571 CASTP20810 708 aaKnown RBP20.14■□□□□ 0.81
HDAC8-206ENST00000373571 PRIM1P49642 420 aaKnown RBP20.14■□□□□ 0.81
HDAC8-206ENST00000373571 MYD88Q99836 296 aa20.14■□□□□ 0.81
HDAC8-206ENST00000373571 CCDC8Q9H0W5 538 aaPredicted RBP20.14■□□□□ 0.81
HDAC8-206ENST00000373571 SIL1Q9H173 461 aa20.14■□□□□ 0.81
HDAC8-206ENST00000373571 GCKRQ14397 625 aa20.13■□□□□ 0.81
HDAC8-206ENST00000373571 RUFY3Q7L099 469 aa20.13■□□□□ 0.81
HDAC8-206ENST00000373571 METTL22Q9BUU2 404 aaPredicted RBP20.13■□□□□ 0.81
HDAC8-206ENST00000373571 RPAP1Q9BWH6 1393 aaPredicted RBP20.13■□□□□ 0.81
HDAC8-206ENST00000373571 ERBB4Q15303 1308 aa20.13■□□□□ 0.81
HDAC8-206ENST00000373571 PRPF40BQ6NWY9 871 aaKnown RBP20.12■□□□□ 0.81
HDAC8-206ENST00000373571 TTC5Q8N0Z6 440 aa20.12■□□□□ 0.81
HDAC8-206ENST00000373571 CABLES1Q8TDN4 633 aa20.12■□□□□ 0.81
HDAC8-206ENST00000373571 RBSNQ9H1K0 784 aa20.12■□□□□ 0.81
HDAC8-206ENST00000373571 MRC1P22897 1456 aa20.12■□□□□ 0.81
HDAC8-206ENST00000373571 LARP6Q9BRS8 491 aaKnown RBP20.12■□□□□ 0.81
HDAC8-206ENST00000373571 SNRPA1P09661 255 aaKnown RBP20.11■□□□□ 0.81
HDAC8-206ENST00000373571 CPA1P15085 419 aa20.11■□□□□ 0.81
HDAC8-206ENST00000373571 FOXD4L6Q3SYB3 417 aaPredicted RBP20.11■□□□□ 0.81
HDAC8-206ENST00000373571 FOXD4L3Q6VB84 417 aaPredicted RBP20.11■□□□□ 0.81
HDAC8-206ENST00000373571 DCAF5Q96JK2 942 aa20.11■□□□□ 0.81
HDAC8-206ENST00000373571 TLR7Q9NYK1 1049 aaKnown RBP20.11■□□□□ 0.81
HDAC8-206ENST00000373571 DCCP43146 1447 aa20.11■□□□□ 0.81
HDAC8-206ENST00000373571 SYCE3A1L190 88 aa20.11■□□□□ 0.81
HDAC8-206ENST00000373571 HIP1O00291 1037 aa20.11■□□□□ 0.81
HDAC8-206ENST00000373571 CHRNA2Q15822 529 aa20.11■□□□□ 0.81
HDAC8-206ENST00000373571 LRSAM1Q6UWE0 723 aa20.11■□□□□ 0.81
HDAC8-206ENST00000373571 KLHDC4Q8TBB5 520 aa20.11■□□□□ 0.81
HDAC8-206ENST00000373571 JAKMIP1Q96N16 626 aaKnown RBP20.11■□□□□ 0.81
HDAC8-206ENST00000373571 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.11■□□□□ 0.81
HDAC8-206ENST00000373571 USP16Q9Y5T5 823 aa20.11■□□□□ 0.81
HDAC8-206ENST00000373571 CCDC171Q6TFL3 1326 aa20.1■□□□□ 0.81
HDAC8-206ENST00000373571 STRCP1A6NGW2 1772 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms