RNA–Protein interactions for RNA: ENST00000373463.7

TMEM54-202, Transcript of transmembrane protein 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM54, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-202ENST00000373463 DPEP1P16444 411 aa27.69■■■□□ 2.02
TMEM54-202ENST00000373463 KCNA3P22001 575 aa27.69■■■□□ 2.02
TMEM54-202ENST00000373463 CALD1Q05682 793 aaKnown RBP27.69■■■□□ 2.02
TMEM54-202ENST00000373463 UTRNP46939 3433 aa27.69■■■□□ 2.02
TMEM54-202ENST00000373463 CLEC4GQ6UXB4 293 aa27.68■■■□□ 2.02
TMEM54-202ENST00000373463 RGL2O15211 777 aa27.67■■■□□ 2.02
TMEM54-202ENST00000373463 DUSP27Q5VZP5 1158 aa27.67■■■□□ 2.02
TMEM54-202ENST00000373463 HOXB7P09629 217 aa27.66■■■□□ 2.02
TMEM54-202ENST00000373463 SALL2Q9Y467 1007 aaPredicted RBP27.66■■■□□ 2.02
TMEM54-202ENST00000373463 MAP3K15Q6ZN16 1313 aa27.66■■■□□ 2.02
TMEM54-202ENST00000373463 PRR5LQ6MZQ0 368 aa27.65■■■□□ 2.02
TMEM54-202ENST00000373463 CHD4Q14839 1912 aa27.65■■■□□ 2.02
TMEM54-202ENST00000373463 DLEC1Q9Y238 1755 aa27.64■■■□□ 2.02
TMEM54-202ENST00000373463 CHRNA5P30532 468 aa27.64■■■□□ 2.02
TMEM54-202ENST00000373463 CCDC24Q8N4L8 307 aa27.64■■■□□ 2.02
TMEM54-202ENST00000373463 C8orf58Q8NAV2 365 aa27.64■■■□□ 2.02
TMEM54-202ENST00000373463 TSR2Q969E8 191 aaKnown RBP27.64■■■□□ 2.02
TMEM54-202ENST00000373463 SETDB2Q96T68 719 aa27.64■■■□□ 2.02
TMEM54-202ENST00000373463 ERVV-1B6SEH8 477 aa27.63■■■□□ 2.01
TMEM54-202ENST00000373463 HDGFL1Q5TGJ6 251 aa27.63■■■□□ 2.01
TMEM54-202ENST00000373463 CHPF2Q9P2E5 772 aa27.63■■■□□ 2.01
TMEM54-202ENST00000373463 ZNF652Q9Y2D9 606 aa27.63■■■□□ 2.01
TMEM54-202ENST00000373463 COL11A2P13942 1736 aaPredicted RBP27.62■■■□□ 2.01
TMEM54-202ENST00000373463 ZBTB3Q9H5J0 574 aa27.62■■■□□ 2.01
TMEM54-202ENST00000373463 DDX21Q9NR30 783 aaKnown RBP eCLIP27.62■■■□□ 2.01
TMEM54-202ENST00000373463 IL16Q14005 1332 aa27.62■■■□□ 2.01
TMEM54-202ENST00000373463 ELL2O00472 640 aaPredicted RBP27.61■■■□□ 2.01
TMEM54-202ENST00000373463 ATP10DQ9P241 1426 aa27.6■■■□□ 2.01
TMEM54-202ENST00000373463 CCER2I3L3R5 266 aa27.6■■■□□ 2.01
TMEM54-202ENST00000373463 KIF6Q6ZMV9 814 aa27.6■■■□□ 2.01
TMEM54-202ENST00000373463 TSPYL6Q8N831 410 aa27.6■■■□□ 2.01
TMEM54-202ENST00000373463 NIP7Q9Y221 180 aaKnown RBP eCLIP27.6■■■□□ 2.01
TMEM54-202ENST00000373463 XAGE3Q8WTP9 111 aa27.59■■■□□ 2.01
TMEM54-202ENST00000373463 SPINK5Q9NQ38 1064 aaPredicted RBP27.59■■■□□ 2.01
TMEM54-202ENST00000373463 ARFGEF1Q9Y6D6 1849 aa27.59■■■□□ 2.01
TMEM54-202ENST00000373463 COPS6Q7L5N1 327 aa27.58■■■□□ 2.01
TMEM54-202ENST00000373463 GRIN3BO60391 1043 aa27.57■■■□□ 2
TMEM54-202ENST00000373463 GIGYF2Q6Y7W6 1299 aaKnown RBP27.57■■■□□ 2
TMEM54-202ENST00000373463 WDR63Q8IWG1 891 aa27.57■■■□□ 2
TMEM54-202ENST00000373463 CNBD1Q8NA66 436 aa27.57■■■□□ 2
TMEM54-202ENST00000373463 UBN2Q6ZU65 1347 aa27.57■■■□□ 2
TMEM54-202ENST00000373463 ANKRD36CQ5JPF3 1778 aa27.57■■■□□ 2
TMEM54-202ENST00000373463 YY1P25490 414 aa27.55■■■□□ 2
TMEM54-202ENST00000373463 AIMP1Q12904 312 aaKnown RBP27.55■■■□□ 2
TMEM54-202ENST00000373463 NBPF5PQ86XG9 351 aaPredicted RBP27.55■■■□□ 2
TMEM54-202ENST00000373463 ZNF34Q8IZ26 560 aa27.55■■■□□ 2
TMEM54-202ENST00000373463 BRIP1Q9BX63 1249 aa27.55■■■□□ 2
TMEM54-202ENST00000373463 DBF4Q9UBU7 674 aaPredicted RBP27.55■■■□□ 2
TMEM54-202ENST00000373463 BCS1LQ9Y276 419 aa27.55■■■□□ 2
TMEM54-202ENST00000373463 ZNF521Q96K83 1311 aa27.55■■■□□ 2
TMEM54-202ENST00000373463 FANCIQ9NVI1 1328 aa27.55■■■□□ 2
TMEM54-202ENST00000373463 GPTP24298 496 aa27.54■■■□□ 2
TMEM54-202ENST00000373463 DIEXFQ68CQ4 756 aaKnown RBP27.54■■■□□ 2
TMEM54-202ENST00000373463 PIM2Q9P1W9 311 aa27.54■■■□□ 2
TMEM54-202ENST00000373463 TNRC6CQ9HCJ0 1690 aaKnown RBP27.53■■■□□ 2
TMEM54-202ENST00000373463 FAM177BA6PVY3 158 aa27.53■■■□□ 2
TMEM54-202ENST00000373463 C2CD5Q86YS7 1000 aa27.53■■■□□ 2
TMEM54-202ENST00000373463 MIER1Q8N108 512 aa27.51■■□□□ 1.99
TMEM54-202ENST00000373463 ABCC12Q96J65 1359 aa27.5■■□□□ 1.99
TMEM54-202ENST00000373463 SUSD4Q5VX71 490 aa27.5■■□□□ 1.99
TMEM54-202ENST00000373463 ARFGEF2Q9Y6D5 1785 aa27.5■■□□□ 1.99
TMEM54-202ENST00000373463 ST5P78524 1137 aa27.49■■□□□ 1.99
TMEM54-202ENST00000373463 DALRD3Q5D0E6 543 aaKnown RBP27.49■■□□□ 1.99
TMEM54-202ENST00000373463 TPTE2Q6XPS3 522 aa27.49■■□□□ 1.99
TMEM54-202ENST00000373463 PHAXQ9H814 394 aaKnown RBP27.49■■□□□ 1.99
TMEM54-202ENST00000373463 HYPKQ9NX55 129 aa27.49■■□□□ 1.99
TMEM54-202ENST00000373463 IBTKQ9P2D0 1353 aaPredicted RBP27.48■■□□□ 1.99
TMEM54-202ENST00000373463 H0YIN7 160 aa27.48■■□□□ 1.99
TMEM54-202ENST00000373463 PDE6BP35913 854 aa27.48■■□□□ 1.99
TMEM54-202ENST00000373463 NUTM1Q86Y26 1132 aa27.48■■□□□ 1.99
TMEM54-202ENST00000373463 KLRG2A4D1S0 409 aaPredicted RBP27.47■■□□□ 1.99
TMEM54-202ENST00000373463 NTSR2O95665 410 aa27.47■■□□□ 1.99
TMEM54-202ENST00000373463 TWISTNBQ3B726 338 aaPredicted RBP27.47■■□□□ 1.99
TMEM54-202ENST00000373463 CACNA1SQ13698 1873 aa27.47■■□□□ 1.99
TMEM54-202ENST00000373463 NPHP1O15259 732 aa27.46■■□□□ 1.99
TMEM54-202ENST00000373463 PLBD2Q8NHP8 589 aa27.46■■□□□ 1.99
TMEM54-202ENST00000373463 TCERG1O14776 1098 aaKnown RBP27.45■■□□□ 1.98
TMEM54-202ENST00000373463 SRGNP10124 158 aa27.45■■□□□ 1.98
TMEM54-202ENST00000373463 ERFEQ4G0M1 354 aa27.45■■□□□ 1.98
TMEM54-202ENST00000373463 CCDC30Q5VVM6 783 aa27.45■■□□□ 1.98
TMEM54-202ENST00000373463 SLX4Q8IY92 1834 aa27.44■■□□□ 1.98
TMEM54-202ENST00000373463 EXOSC9Q06265 439 aaKnown RBP27.44■■□□□ 1.98
TMEM54-202ENST00000373463 TCIRG1Q13488 830 aa27.44■■□□□ 1.98
TMEM54-202ENST00000373463 ANKRD13DQ6ZTN6 518 aa27.44■■□□□ 1.98
TMEM54-202ENST00000373463 PARP10Q53GL7 1025 aa27.43■■□□□ 1.98
TMEM54-202ENST00000373463 NLRP10Q86W26 655 aa27.43■■□□□ 1.98
TMEM54-202ENST00000373463 TTLL6Q8N841 843 aa27.43■■□□□ 1.98
TMEM54-202ENST00000373463 NYXQ9GZU5 481 aa27.43■■□□□ 1.98
TMEM54-202ENST00000373463 PDZRN3Q9UPQ7 1066 aa27.43■■□□□ 1.98
TMEM54-202ENST00000373463 RIC1Q4ADV7 1423 aa27.42■■□□□ 1.98
TMEM54-202ENST00000373463 VAMP4O75379 141 aa27.42■■□□□ 1.98
TMEM54-202ENST00000373463 GOLGA2Q08379 1002 aa27.41■■□□□ 1.98
TMEM54-202ENST00000373463 HSP90AB3PQ58FF7 597 aa27.41■■□□□ 1.98
TMEM54-202ENST00000373463 ARHGAP27Q6ZUM4 889 aa27.41■■□□□ 1.98
TMEM54-202ENST00000373463 ZNF622Q969S3 477 aaKnown RBP eCLIP27.41■■□□□ 1.98
TMEM54-202ENST00000373463 ISCA1Q9BUE6 129 aa27.41■■□□□ 1.98
TMEM54-202ENST00000373463 ADCY9O60503 1353 aa27.4■■□□□ 1.98
TMEM54-202ENST00000373463 STYK1Q6J9G0 422 aa27.4■■□□□ 1.98
TMEM54-202ENST00000373463 G2E3Q7L622 706 aa27.4■■□□□ 1.98
TMEM54-202ENST00000373463 GTF2E1P29083 439 aaPredicted RBP27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms