RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 NRDCO43847 1150 aa14.31□□□□□ -0.12
NCDN-202ENST00000373243 C16orf45Q96MC5 204 aaPredicted RBP14.31□□□□□ -0.12
NCDN-202ENST00000373243 SDF4Q9BRK5 362 aa14.31□□□□□ -0.12
NCDN-202ENST00000373243 EFCAB6Q5THR3 1501 aa14.31□□□□□ -0.12
NCDN-202ENST00000373243 CWF19L2Q2TBE0 894 aaKnown RBP14.3□□□□□ -0.12
NCDN-202ENST00000373243 TET3O43151 1660 aa14.3□□□□□ -0.12
NCDN-202ENST00000373243 STK11IPQ8N1F8 1099 aa14.3□□□□□ -0.12
NCDN-202ENST00000373243 MAP3K2Q9Y2U5 619 aa14.3□□□□□ -0.12
NCDN-202ENST00000373243 ZDHHC9Q9Y397 364 aa14.3□□□□□ -0.12
NCDN-202ENST00000373243 ABCC3O15438 1527 aa14.3□□□□□ -0.12
NCDN-202ENST00000373243 RIMBP3CA6NJZ7 1639 aa14.3□□□□□ -0.12
NCDN-202ENST00000373243 RIMBP3BA6NNM3 1639 aa14.3□□□□□ -0.12
NCDN-202ENST00000373243 RIMBP3Q9UFD9 1639 aa14.3□□□□□ -0.12
NCDN-202ENST00000373243 BRD1O95696 1058 aa14.3□□□□□ -0.12
NCDN-202ENST00000373243 UBE2HP62256 183 aa14.3□□□□□ -0.12
NCDN-202ENST00000373243 MAP3K11Q16584 847 aa14.3□□□□□ -0.12
NCDN-202ENST00000373243 CALCOCO1Q9P1Z2 691 aa14.3□□□□□ -0.12
NCDN-202ENST00000373243 PDCP20941 246 aa14.29□□□□□ -0.12
NCDN-202ENST00000373243 ECHDC1Q9NTX5 307 aa14.29□□□□□ -0.12
NCDN-202ENST00000373243 PPRC1Q5VV67 1664 aaKnown RBP14.29□□□□□ -0.12
NCDN-202ENST00000373243 CCDC73Q6ZRK6 1079 aa14.29□□□□□ -0.12
NCDN-202ENST00000373243 LTKP29376 864 aa14.29□□□□□ -0.12
NCDN-202ENST00000373243 IQGAP1P46940 1657 aa14.28□□□□□ -0.12
NCDN-202ENST00000373243 ZC3H6P61129 1189 aaKnown RBP14.28□□□□□ -0.12
NCDN-202ENST00000373243 TTC5Q8N0Z6 440 aa14.28□□□□□ -0.12
NCDN-202ENST00000373243 CCDC85AQ96PX6 553 aaPredicted RBP14.28□□□□□ -0.12
NCDN-202ENST00000373243 TOMM22Q9NS69 142 aa14.28□□□□□ -0.12
NCDN-202ENST00000373243 F13A1P00488 732 aa14.28□□□□□ -0.12
NCDN-202ENST00000373243 ANAPC15P60006 121 aa14.28□□□□□ -0.12
NCDN-202ENST00000373243 PLEKHO1Q53GL0 409 aaPredicted RBP14.28□□□□□ -0.12
NCDN-202ENST00000373243 GPATCH11Q8N954 259 aa14.28□□□□□ -0.12
NCDN-202ENST00000373243 LRRC59Q96AG4 307 aaKnown RBP14.28□□□□□ -0.12
NCDN-202ENST00000373243 USP44Q9H0E7 712 aa14.28□□□□□ -0.12
NCDN-202ENST00000373243 IQSEC2Q5JU85 1478 aa14.28□□□□□ -0.12
NCDN-202ENST00000373243 RNF17Q9BXT8 1623 aaKnown RBP14.28□□□□□ -0.12
NCDN-202ENST00000373243 BRPF1P55201 1214 aaPredicted RBP14.28□□□□□ -0.12
NCDN-202ENST00000373243 KLHDC4Q8TBB5 520 aa14.28□□□□□ -0.12
NCDN-202ENST00000373243 OGFRQ9NZT2 677 aa14.28□□□□□ -0.12
NCDN-202ENST00000373243 RIOK3O14730 519 aaKnown RBP14.27□□□□□ -0.12
NCDN-202ENST00000373243 SNX14Q9Y5W7 946 aa14.27□□□□□ -0.12
NCDN-202ENST00000373243 RASEFQ8IZ41 740 aa14.27□□□□□ -0.13
NCDN-202ENST00000373243 RBM8AQ9Y5S9 174 aaKnown RBP14.27□□□□□ -0.13
NCDN-202ENST00000373243 SOS1Q07889 1333 aaPredicted RBP14.27□□□□□ -0.13
NCDN-202ENST00000373243 ME1P48163 572 aa14.27□□□□□ -0.13
NCDN-202ENST00000373243 WASHC4Q2M389 1173 aa14.27□□□□□ -0.13
NCDN-202ENST00000373243 RAPGEF4Q8WZA2 1011 aa14.27□□□□□ -0.13
NCDN-202ENST00000373243 LGR6Q9HBX8 967 aa14.27□□□□□ -0.13
NCDN-202ENST00000373243 NDUFB9Q9Y6M9 179 aa14.27□□□□□ -0.13
NCDN-202ENST00000373243 FAM135BQ49AJ0 1406 aa14.26□□□□□ -0.13
NCDN-202ENST00000373243 EDC4Q6P2E9 1401 aaKnown RBP14.26□□□□□ -0.13
NCDN-202ENST00000373243 CREBRFQ8IUR6 639 aa14.26□□□□□ -0.13
NCDN-202ENST00000373243 DACT1Q9NYF0 836 aa14.26□□□□□ -0.13
NCDN-202ENST00000373243 PIK3R4Q99570 1358 aa14.26□□□□□ -0.13
NCDN-202ENST00000373243 CCT2P78371 535 aaKnown RBP14.26□□□□□ -0.13
NCDN-202ENST00000373243 ZSCAN31Q96LW9 406 aaPredicted RBP14.26□□□□□ -0.13
NCDN-202ENST00000373243 METP08581 1390 aa14.26□□□□□ -0.13
NCDN-202ENST00000373243 TULP4Q9NRJ4 1543 aa14.26□□□□□ -0.13
NCDN-202ENST00000373243 LOC102724159A0A0B4J2E5 919 aa14.26□□□□□ -0.13
NCDN-202ENST00000373243 CPLX1O14810 134 aa14.26□□□□□ -0.13
NCDN-202ENST00000373243 KCNQ3O43525 872 aa14.26□□□□□ -0.13
NCDN-202ENST00000373243 PWP2Q15269 919 aaKnown RBP14.26□□□□□ -0.13
NCDN-202ENST00000373243 LUZP1Q86V48 1076 aa14.26□□□□□ -0.13
NCDN-202ENST00000373243 HOMER1Q86YM7 354 aa14.26□□□□□ -0.13
NCDN-202ENST00000373243 INTS4Q96HW7 963 aaKnown RBP14.26□□□□□ -0.13
NCDN-202ENST00000373243 PDLIM2Q96JY6 352 aa14.26□□□□□ -0.13
NCDN-202ENST00000373243 DDIT3P35638 169 aa14.25□□□□□ -0.13
NCDN-202ENST00000373243 ERC1Q8IUD2 1116 aa14.25□□□□□ -0.13
NCDN-202ENST00000373243 TRMT1Q9NXH9 659 aaKnown RBP14.25□□□□□ -0.13
NCDN-202ENST00000373243 TNRQ92752 1358 aa14.25□□□□□ -0.13
NCDN-202ENST00000373243 KINO60870 393 aaKnown RBP14.25□□□□□ -0.13
NCDN-202ENST00000373243 SLC39A6Q13433 755 aa14.25□□□□□ -0.13
NCDN-202ENST00000373243 CCDC186Q7Z3E2 898 aa14.25□□□□□ -0.13
NCDN-202ENST00000373243 RAB11FIP4Q86YS3 637 aa14.25□□□□□ -0.13
NCDN-202ENST00000373243 CCAR2Q8N163 923 aaKnown RBP14.25□□□□□ -0.13
NCDN-202ENST00000373243 FAM227BQ96M60 508 aa14.25□□□□□ -0.13
NCDN-202ENST00000373243 FEZ1Q99689 392 aa14.25□□□□□ -0.13
NCDN-202ENST00000373243 PRR36Q9H6K5 1346 aa14.25□□□□□ -0.13
NCDN-202ENST00000373243 IL17REQ8NFR9 667 aa14.24□□□□□ -0.13
NCDN-202ENST00000373243 PPP6R1Q9UPN7 881 aa14.24□□□□□ -0.13
NCDN-202ENST00000373243 AK9Q5TCS8 1911 aa14.24□□□□□ -0.13
NCDN-202ENST00000373243 ATP5J2-PTCD1G3V325 749 aa14.24□□□□□ -0.13
NCDN-202ENST00000373243 SGSM2O43147 1006 aa14.24□□□□□ -0.13
NCDN-202ENST00000373243 PTCD1O75127 700 aaKnown RBP14.24□□□□□ -0.13
NCDN-202ENST00000373243 RSPH14Q9UHP6 348 aa14.24□□□□□ -0.13
NCDN-202ENST00000373243 FRMPD1Q5SYB0 1578 aa14.24□□□□□ -0.13
NCDN-202ENST00000373243 TNNT1P13805 278 aa14.23□□□□□ -0.13
NCDN-202ENST00000373243 PTGS1P23219 599 aa14.23□□□□□ -0.13
NCDN-202ENST00000373243 GTF2F1P35269 517 aaKnown RBP eCLIP14.23□□□□□ -0.137e-7■■■□□ 17.8
NCDN-202ENST00000373243 GTF2A1P52655 376 aaPredicted RBP14.23□□□□□ -0.13
NCDN-202ENST00000373243 GABPB1Q06547 395 aaPredicted RBP14.23□□□□□ -0.13
NCDN-202ENST00000373243 EDC3Q96F86 508 aaKnown RBP14.23□□□□□ -0.13
NCDN-202ENST00000373243 MYD88Q99836 296 aa14.23□□□□□ -0.13
NCDN-202ENST00000373243 SMC2O95347 1197 aa14.23□□□□□ -0.13
NCDN-202ENST00000373243 DBF4Q9UBU7 674 aaPredicted RBP14.23□□□□□ -0.13
NCDN-202ENST00000373243 PTCH1Q13635 1447 aa14.23□□□□□ -0.13
NCDN-202ENST00000373243 ZNF165P49910 485 aa14.23□□□□□ -0.13
NCDN-202ENST00000373243 PTH1RQ03431 593 aa14.23□□□□□ -0.13
NCDN-202ENST00000373243 NMIQ13287 307 aaPredicted RBP14.23□□□□□ -0.13
NCDN-202ENST00000373243 ANO6Q4KMQ2 910 aa14.23□□□□□ -0.13
NCDN-202ENST00000373243 QRICH2Q9H0J4 1663 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms