RNA–Protein interactions for RNA: ENST00000372988.8

CCND3-202, Transcript of cyclin D3, humanhuman

TSL 1 (best) BASIC

Gene CCND3, Length 2,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-202ENST00000372988 LRMPQ12912 555 aa28.39■■■□□ 2.14
CCND3-202ENST00000372988 TXNDC2Q86VQ3 553 aa28.39■■■□□ 2.14
CCND3-202ENST00000372988 ZSWIM6Q9HCJ5 1215 aa28.39■■■□□ 2.14
CCND3-202ENST00000372988 METP08581 1390 aa28.39■■■□□ 2.14
CCND3-202ENST00000372988 SURF6O75683 361 aaKnown RBP28.39■■■□□ 2.13
CCND3-202ENST00000372988 CWC27Q6UX04 472 aaKnown RBP28.39■■■□□ 2.13
CCND3-202ENST00000372988 CBX8Q9HC52 389 aa28.39■■■□□ 2.13
CCND3-202ENST00000372988 LRRC37A3O60309 1634 aa28.38■■■□□ 2.13
CCND3-202ENST00000372988 VPS37CA5D8V6 355 aaPredicted RBP28.38■■■□□ 2.13
CCND3-202ENST00000372988 PPP1R42Q7Z4L9 355 aa28.38■■■□□ 2.13
CCND3-202ENST00000372988 ARHGAP30Q7Z6I6 1101 aaPredicted RBP28.38■■■□□ 2.13
CCND3-202ENST00000372988 CCDC171Q6TFL3 1326 aa28.38■■■□□ 2.13
CCND3-202ENST00000372988 USP42Q9H9J4 1324 aaKnown RBP28.38■■■□□ 2.13
CCND3-202ENST00000372988 ZNF75DP51815 510 aa28.37■■■□□ 2.13
CCND3-202ENST00000372988 C16orf45Q96MC5 204 aaPredicted RBP28.37■■■□□ 2.13
CCND3-202ENST00000372988 USP31Q70CQ4 1352 aa28.37■■■□□ 2.13
CCND3-202ENST00000372988 MAP3K5Q99683 1374 aa28.37■■■□□ 2.13
CCND3-202ENST00000372988 A0A0U1RQG5 324 aaPredicted RBP28.37■■■□□ 2.13
CCND3-202ENST00000372988 DTNBO60941 627 aa28.37■■■□□ 2.13
CCND3-202ENST00000372988 KRT85P78386 507 aa28.37■■■□□ 2.13
CCND3-202ENST00000372988 GABPB1Q06547 395 aaPredicted RBP28.37■■■□□ 2.13
CCND3-202ENST00000372988 ADCK5Q3MIX3 580 aa28.37■■■□□ 2.13
CCND3-202ENST00000372988 ZSCAN25Q6NSZ9 544 aa28.37■■■□□ 2.13
CCND3-202ENST00000372988 SIRT1Q96EB6 747 aa28.37■■■□□ 2.13
CCND3-202ENST00000372988 KIF1BPQ96EK5 621 aa28.37■■■□□ 2.13
CCND3-202ENST00000372988 CGNQ9P2M7 1197 aaKnown RBP28.37■■■□□ 2.13
CCND3-202ENST00000372988 PAXBP1Q9Y5B6 917 aa28.37■■■□□ 2.13
CCND3-202ENST00000372988 RBM43Q6ZSC3 357 aaKnown RBP28.36■■■□□ 2.13
CCND3-202ENST00000372988 JAKMIP1Q96N16 626 aaKnown RBP28.36■■■□□ 2.13
CCND3-202ENST00000372988 NRBP1Q9UHY1 535 aa28.36■■■□□ 2.13
CCND3-202ENST00000372988 DDX41Q9UJV9 622 aaKnown RBP28.36■■■□□ 2.13
CCND3-202ENST00000372988 TTC21AQ8NDW8 1320 aa28.36■■■□□ 2.13
CCND3-202ENST00000372988 CACNA1FO60840 1977 aa28.36■■■□□ 2.13
CCND3-202ENST00000372988 TNNT1P13805 278 aa28.36■■■□□ 2.13
CCND3-202ENST00000372988 ME3Q16798 604 aa28.36■■■□□ 2.13
CCND3-202ENST00000372988 KDRP35968 1356 aa28.35■■■□□ 2.13
CCND3-202ENST00000372988 IGSF3O75054 1194 aa28.35■■■□□ 2.13
CCND3-202ENST00000372988 PTH1RQ03431 593 aa28.35■■■□□ 2.13
CCND3-202ENST00000372988 CAMK4Q16566 473 aa28.35■■■□□ 2.13
CCND3-202ENST00000372988 ANO6Q4KMQ2 910 aa28.35■■■□□ 2.13
CCND3-202ENST00000372988 TDRD7Q8NHU6 1098 aaKnown RBP28.35■■■□□ 2.13
CCND3-202ENST00000372988 CYP46A1Q9Y6A2 500 aa28.35■■■□□ 2.13
CCND3-202ENST00000372988 TECPR2O15040 1411 aa28.35■■■□□ 2.13
CCND3-202ENST00000372988 PDIA4P13667 645 aaKnown RBP28.34■■■□□ 2.13
CCND3-202ENST00000372988 TAF3Q5VWG9 929 aa28.34■■■□□ 2.13
CCND3-202ENST00000372988 NECTIN2Q92692 538 aa28.34■■■□□ 2.13
CCND3-202ENST00000372988 TNMDQ9H2S6 317 aa28.33■■■□□ 2.13
CCND3-202ENST00000372988 MORC2Q9Y6X9 1032 aaPredicted RBP28.33■■■□□ 2.13
CCND3-202ENST00000372988 HTATSF1O43719 755 aaKnown RBP28.32■■■□□ 2.12
CCND3-202ENST00000372988 PRPF40BQ6NWY9 871 aaKnown RBP28.32■■■□□ 2.12
CCND3-202ENST00000372988 DRC7Q8IY82 874 aa28.32■■■□□ 2.12
CCND3-202ENST00000372988 LARP1BQ659C4 914 aaKnown RBP28.31■■■□□ 2.12
CCND3-202ENST00000372988 CDC37L1Q7L3B6 337 aa28.31■■■□□ 2.12
CCND3-202ENST00000372988 CKAP2LQ8IYA6 745 aa28.31■■■□□ 2.12
CCND3-202ENST00000372988 DACT1Q9NYF0 836 aa28.31■■■□□ 2.12
CCND3-202ENST00000372988 CHD2O14647 1828 aaKnown RBP28.31■■■□□ 2.12
CCND3-202ENST00000372988 NECAB1Q8N987 351 aa28.31■■■□□ 2.12
CCND3-202ENST00000372988 CCDC112Q8NEF3 446 aa28.31■■■□□ 2.12
CCND3-202ENST00000372988 RUFY2Q8WXA3 655 aa28.31■■■□□ 2.12
CCND3-202ENST00000372988 TRIM5Q9C035 493 aa28.31■■■□□ 2.12
CCND3-202ENST00000372988 CHMP3Q9Y3E7 222 aa28.31■■■□□ 2.12
CCND3-202ENST00000372988 TTC41PQ6P2S7 1318 aa28.31■■■□□ 2.12
CCND3-202ENST00000372988 NAA30Q147X3 362 aaPredicted RBP28.3■■■□□ 2.12
CCND3-202ENST00000372988 CLSTN2Q9H4D0 955 aa28.3■■■□□ 2.12
CCND3-202ENST00000372988 DDX19AQ9NUU7 478 aaKnown RBP28.3■■■□□ 2.12
CCND3-202ENST00000372988 TPCN1Q9ULQ1 816 aa28.3■■■□□ 2.12
CCND3-202ENST00000372988 ZNF771Q7L3S4 317 aaPredicted RBP28.3■■■□□ 2.12
CCND3-202ENST00000372988 FMN2Q9NZ56 1722 aa28.29■■■□□ 2.12
CCND3-202ENST00000372988 ADGRL3Q9HAR2 1447 aa28.29■■■□□ 2.12
CCND3-202ENST00000372988 GLRX3O76003 335 aaKnown RBP28.29■■■□□ 2.12
CCND3-202ENST00000372988 NECTIN1Q15223 517 aa28.29■■■□□ 2.12
CCND3-202ENST00000372988 SRGAP3O43295 1099 aa28.28■■■□□ 2.12
CCND3-202ENST00000372988 CACTINQ8WUQ7 758 aaKnown RBP28.28■■■□□ 2.12
CCND3-202ENST00000372988 SLFN14P0C7P3 912 aa28.28■■■□□ 2.12
CCND3-202ENST00000372988 CDC25BP30305 580 aa28.28■■■□□ 2.12
CCND3-202ENST00000372988 FAM173BQ6P4H8 233 aa28.28■■■□□ 2.12
CCND3-202ENST00000372988 KIF18AQ8NI77 898 aa28.28■■■□□ 2.12
CCND3-202ENST00000372988 CEP170BQ9Y4F5 1589 aaPredicted RBP28.27■■■□□ 2.12
CCND3-202ENST00000372988 ACEP12821 1306 aa28.27■■■□□ 2.12
CCND3-202ENST00000372988 FERMT3Q86UX7 667 aa28.27■■■□□ 2.12
CCND3-202ENST00000372988 SCAND2PQ9GZW5 306 aaPredicted RBP28.27■■■□□ 2.12
CCND3-202ENST00000372988 USP6P35125 1406 aa28.26■■■□□ 2.12
CCND3-202ENST00000372988 NPHP3Q7Z494 1330 aa28.26■■■□□ 2.11
CCND3-202ENST00000372988 IGSF1Q8N6C5 1336 aa28.26■■■□□ 2.11
CCND3-202ENST00000372988 TOPAZ1Q8N9V7 1692 aa28.26■■■□□ 2.11
CCND3-202ENST00000372988 PDCP20941 246 aa28.26■■■□□ 2.11
CCND3-202ENST00000372988 TPD52L1Q16890 204 aaPredicted RBP28.26■■■□□ 2.11
CCND3-202ENST00000372988 CCDC144BQ3MJ40 725 aa28.26■■■□□ 2.11
CCND3-202ENST00000372988 CCDC144CPQ8IYA2 1237 aa28.26■■■□□ 2.11
CCND3-202ENST00000372988 PPP6R1Q9UPN7 881 aa28.26■■■□□ 2.11
CCND3-202ENST00000372988 CLIP2Q9UDT6 1046 aa28.25■■■□□ 2.11
CCND3-202ENST00000372988 HSP90AB4PQ58FF6 505 aa28.24■■■□□ 2.11
CCND3-202ENST00000372988 CEP135Q66GS9 1140 aa28.24■■■□□ 2.11
CCND3-202ENST00000372988 LEO1Q8WVC0 666 aaPredicted RBP28.24■■■□□ 2.11
CCND3-202ENST00000372988 PLEKHG3A1L390 1219 aa28.24■■■□□ 2.11
CCND3-202ENST00000372988 SPATA32Q96LK8 384 aa28.24■■■□□ 2.11
CCND3-202ENST00000372988 EYA1Q99502 592 aa28.24■■■□□ 2.11
CCND3-202ENST00000372988 PHAXQ9H814 394 aaKnown RBP28.24■■■□□ 2.11
CCND3-202ENST00000372988 ZNF165P49910 485 aa28.23■■■□□ 2.11
CCND3-202ENST00000372988 SBNO1A3KN83 1393 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms