RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 PROSER3Q2NL68 480 aa26.05■■□□□ 1.76
TMEM53-205ENST00000372244 WWC3Q9ULE0 1092 aa26.05■■□□□ 1.76
TMEM53-205ENST00000372244 SENP3-EIF4A1A0A087X0R7 540 aa26.04■■□□□ 1.76
TMEM53-205ENST00000372244 DUSP27Q5VZP5 1158 aa26.04■■□□□ 1.76
TMEM53-205ENST00000372244 PRR5LQ6MZQ0 368 aa26.04■■□□□ 1.76
TMEM53-205ENST00000372244 FAM9BQ8IZU0 186 aa26.04■■□□□ 1.76
TMEM53-205ENST00000372244 MAP3K15Q6ZN16 1313 aa26.04■■□□□ 1.76
TMEM53-205ENST00000372244 PIM2Q9P1W9 311 aa26.04■■□□□ 1.76
TMEM53-205ENST00000372244 AFDNP55196 1824 aaKnown RBP26.03■■□□□ 1.76
TMEM53-205ENST00000372244 CHRNA5P30532 468 aa26.03■■□□□ 1.76
TMEM53-205ENST00000372244 BRIP1Q9BX63 1249 aa26.03■■□□□ 1.76
TMEM53-205ENST00000372244 DDX21Q9NR30 783 aaKnown RBP eCLIP26.03■■□□□ 1.76
TMEM53-205ENST00000372244 NECTIN2Q92692 538 aa26.02■■□□□ 1.76
TMEM53-205ENST00000372244 NIP7Q9Y221 180 aaKnown RBP eCLIP26.02■■□□□ 1.76
TMEM53-205ENST00000372244 BCORQ6W2J9 1755 aa26.02■■□□□ 1.76
TMEM53-205ENST00000372244 ANXA1P04083 346 aa26.01■■□□□ 1.75
TMEM53-205ENST00000372244 KIF6Q6ZMV9 814 aa26.01■■□□□ 1.75
TMEM53-205ENST00000372244 N4BP2Q86UW6 1770 aaPredicted RBP26.01■■□□□ 1.75
TMEM53-205ENST00000372244 IL16Q14005 1332 aa26■■□□□ 1.75
TMEM53-205ENST00000372244 HDGFL1Q5TGJ6 251 aa26■■□□□ 1.75
TMEM53-205ENST00000372244 BCS1LQ9Y276 419 aa26■■□□□ 1.75
TMEM53-205ENST00000372244 CNBD1Q8NA66 436 aa25.99■■□□□ 1.75
TMEM53-205ENST00000372244 TPTE2Q6XPS3 522 aa25.98■■□□□ 1.75
TMEM53-205ENST00000372244 GIGYF2Q6Y7W6 1299 aaKnown RBP25.98■■□□□ 1.75
TMEM53-205ENST00000372244 COPS6Q7L5N1 327 aa25.98■■□□□ 1.75
TMEM53-205ENST00000372244 NBPF5PQ86XG9 351 aaPredicted RBP25.98■■□□□ 1.75
TMEM53-205ENST00000372244 C8orf58Q8NAV2 365 aa25.98■■□□□ 1.75
TMEM53-205ENST00000372244 ZBTB3Q9H5J0 574 aa25.98■■□□□ 1.75
TMEM53-205ENST00000372244 CHPF2Q9P2E5 772 aa25.98■■□□□ 1.75
TMEM53-205ENST00000372244 DALRD3Q5D0E6 543 aaKnown RBP25.98■■□□□ 1.75
TMEM53-205ENST00000372244 WDR63Q8IWG1 891 aa25.98■■□□□ 1.75
TMEM53-205ENST00000372244 CCDC24Q8N4L8 307 aa25.98■■□□□ 1.75
TMEM53-205ENST00000372244 DBF4Q9UBU7 674 aaPredicted RBP25.98■■□□□ 1.75
TMEM53-205ENST00000372244 PDZRN3Q9UPQ7 1066 aa25.98■■□□□ 1.75
TMEM53-205ENST00000372244 H0YIN7 160 aa25.97■■□□□ 1.75
TMEM53-205ENST00000372244 PDE6BP35913 854 aa25.97■■□□□ 1.75
TMEM53-205ENST00000372244 ZNF34Q8IZ26 560 aa25.97■■□□□ 1.75
TMEM53-205ENST00000372244 XAGE3Q8WTP9 111 aa25.97■■□□□ 1.75
TMEM53-205ENST00000372244 CHD4Q14839 1912 aa25.96■■□□□ 1.75
TMEM53-205ENST00000372244 ELL2O00472 640 aaPredicted RBP25.96■■□□□ 1.75
TMEM53-205ENST00000372244 C2CD5Q86YS7 1000 aa25.96■■□□□ 1.75
TMEM53-205ENST00000372244 ATP10DQ9P241 1426 aa25.96■■□□□ 1.75
TMEM53-205ENST00000372244 ST5P78524 1137 aa25.95■■□□□ 1.74
TMEM53-205ENST00000372244 TSR2Q969E8 191 aaKnown RBP25.95■■□□□ 1.74
TMEM53-205ENST00000372244 KLRG2A4D1S0 409 aaPredicted RBP25.94■■□□□ 1.74
TMEM53-205ENST00000372244 SALL2Q9Y467 1007 aaPredicted RBP25.94■■□□□ 1.74
TMEM53-205ENST00000372244 BRCA1P38398 1863 aaKnown RBP25.93■■□□□ 1.74
TMEM53-205ENST00000372244 CCER2I3L3R5 266 aa25.93■■□□□ 1.74
TMEM53-205ENST00000372244 AIMP1Q12904 312 aaKnown RBP25.93■■□□□ 1.74
TMEM53-205ENST00000372244 TSPYL6Q8N831 410 aa25.93■■□□□ 1.74
TMEM53-205ENST00000372244 HYPKQ9NX55 129 aa25.93■■□□□ 1.74
TMEM53-205ENST00000372244 NPHP1O15259 732 aa25.92■■□□□ 1.74
TMEM53-205ENST00000372244 TTLL6Q8N841 843 aa25.91■■□□□ 1.74
TMEM53-205ENST00000372244 CHMP4AQ9BY43 222 aa25.91■■□□□ 1.74
TMEM53-205ENST00000372244 UBN2Q6ZU65 1347 aa25.91■■□□□ 1.74
TMEM53-205ENST00000372244 SRGNP10124 158 aa25.91■■□□□ 1.74
TMEM53-205ENST00000372244 GPTP24298 496 aa25.91■■□□□ 1.74
TMEM53-205ENST00000372244 NYXQ9GZU5 481 aa25.91■■□□□ 1.74
TMEM53-205ENST00000372244 NUP98P52948 1817 aa25.9■■□□□ 1.74
TMEM53-205ENST00000372244 FAM177BA6PVY3 158 aa25.9■■□□□ 1.74
TMEM53-205ENST00000372244 SUSD4Q5VX71 490 aa25.9■■□□□ 1.74
TMEM53-205ENST00000372244 ZNF784Q8NCA9 323 aaPredicted RBP25.9■■□□□ 1.74
TMEM53-205ENST00000372244 ANKRD13DQ6ZTN6 518 aa25.89■■□□□ 1.73
TMEM53-205ENST00000372244 ARHGAP27Q6ZUM4 889 aa25.89■■□□□ 1.73
TMEM53-205ENST00000372244 ANKRD31Q8N7Z5 1873 aa25.89■■□□□ 1.73
TMEM53-205ENST00000372244 TCIRG1Q13488 830 aa25.88■■□□□ 1.73
TMEM53-205ENST00000372244 PARP10Q53GL7 1025 aa25.88■■□□□ 1.73
TMEM53-205ENST00000372244 PLBD2Q8NHP8 589 aa25.88■■□□□ 1.73
TMEM53-205ENST00000372244 HSP90AB3PQ58FF7 597 aa25.87■■□□□ 1.73
TMEM53-205ENST00000372244 CCDC30Q5VVM6 783 aa25.87■■□□□ 1.73
TMEM53-205ENST00000372244 STYK1Q6J9G0 422 aa25.87■■□□□ 1.73
TMEM53-205ENST00000372244 ZNF622Q969S3 477 aaKnown RBP eCLIP25.87■■□□□ 1.73
TMEM53-205ENST00000372244 SPINK5Q9NQ38 1064 aaPredicted RBP25.87■■□□□ 1.73
TMEM53-205ENST00000372244 IBTKQ9P2D0 1353 aaPredicted RBP25.87■■□□□ 1.73
TMEM53-205ENST00000372244 GTF2E1P29083 439 aaPredicted RBP25.86■■□□□ 1.73
TMEM53-205ENST00000372244 NUTM1Q86Y26 1132 aa25.86■■□□□ 1.73
TMEM53-205ENST00000372244 MASTLQ96GX5 879 aa25.86■■□□□ 1.73
TMEM53-205ENST00000372244 NTSR2O95665 410 aa25.85■■□□□ 1.73
TMEM53-205ENST00000372244 ERFEQ4G0M1 354 aa25.85■■□□□ 1.73
TMEM53-205ENST00000372244 PPP1R42Q7Z4L9 355 aa25.85■■□□□ 1.73
TMEM53-205ENST00000372244 ZNF521Q96K83 1311 aa25.85■■□□□ 1.73
TMEM53-205ENST00000372244 FANCIQ9NVI1 1328 aa25.85■■□□□ 1.73
TMEM53-205ENST00000372244 TWISTNBQ3B726 338 aaPredicted RBP25.85■■□□□ 1.73
TMEM53-205ENST00000372244 CNKSR1Q969H4 720 aa25.85■■□□□ 1.73
TMEM53-205ENST00000372244 PHAXQ9H814 394 aaKnown RBP25.85■■□□□ 1.73
TMEM53-205ENST00000372244 ARFGEF1Q9Y6D6 1849 aa25.84■■□□□ 1.73
TMEM53-205ENST00000372244 NLRP10Q86W26 655 aa25.84■■□□□ 1.73
TMEM53-205ENST00000372244 NPR1P16066 1061 aa25.83■■□□□ 1.73
TMEM53-205ENST00000372244 CRY2Q49AN0 593 aa25.83■■□□□ 1.73
TMEM53-205ENST00000372244 SLC10A5Q5PT55 438 aa25.83■■□□□ 1.73
TMEM53-205ENST00000372244 UTP14AQ9BVJ6 771 aaKnown RBP25.83■■□□□ 1.73
TMEM53-205ENST00000372244 DLEC1Q9Y238 1755 aa25.82■■□□□ 1.72
TMEM53-205ENST00000372244 GOLGA2Q08379 1002 aa25.82■■□□□ 1.72
TMEM53-205ENST00000372244 DIEXFQ68CQ4 756 aaKnown RBP25.82■■□□□ 1.72
TMEM53-205ENST00000372244 ABCC12Q96J65 1359 aa25.81■■□□□ 1.72
TMEM53-205ENST00000372244 VAMP4O75379 141 aa25.8■■□□□ 1.72
TMEM53-205ENST00000372244 TRIM28Q13263 835 aaKnown RBP25.8■■□□□ 1.72
TMEM53-205ENST00000372244 ISCA1Q9BUE6 129 aa25.8■■□□□ 1.72
TMEM53-205ENST00000372244 ADCY9O60503 1353 aa25.8■■□□□ 1.72
TMEM53-205ENST00000372244 C7orf43Q8WVR3 580 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms