RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 MRE11P49959 708 aa15.68■□□□□ 0.1
GPC3-201ENST00000370818 CASC1Q6TDU7 716 aa15.68■□□□□ 0.1
GPC3-201ENST00000370818 RBM42Q9BTD8 480 aaKnown RBP15.68■□□□□ 0.1
GPC3-201ENST00000370818 TPM2P07951 284 aa15.67■□□□□ 0.1
GPC3-201ENST00000370818 MCM4P33991 863 aa15.67■□□□□ 0.1
GPC3-201ENST00000370818 PIP4K2AP48426 406 aaPredicted RBP15.67■□□□□ 0.1
GPC3-201ENST00000370818 NKX1-1Q15270 411 aaPredicted RBP15.67■□□□□ 0.1
GPC3-201ENST00000370818 RIC3Q7Z5B4 369 aa15.67■□□□□ 0.1
GPC3-201ENST00000370818 KIF1BPQ96EK5 621 aa15.67■□□□□ 0.1
GPC3-201ENST00000370818 PRDM4Q9UKN5 801 aa15.67■□□□□ 0.1
GPC3-201ENST00000370818 TUBGCP6Q96RT7 1819 aa15.66■□□□□ 0.1
GPC3-201ENST00000370818 NUTM1Q86Y26 1132 aa15.66■□□□□ 0.1
GPC3-201ENST00000370818 SUCLG2Q96I99 432 aa15.66■□□□□ 0.1
GPC3-201ENST00000370818 AOX1Q06278 1338 aa15.66■□□□□ 0.1
GPC3-201ENST00000370818 ERVV-2B6SEH9 535 aa15.65■□□□□ 0.1
GPC3-201ENST00000370818 EVA1CP58658 441 aa15.65■□□□□ 0.1
GPC3-201ENST00000370818 UNC5CLQ8IV45 518 aa15.65■□□□□ 0.1
GPC3-201ENST00000370818 METTL22Q9BUU2 404 aaPredicted RBP15.65■□□□□ 0.1
GPC3-201ENST00000370818 NEURL1BA8MQ27 555 aa15.65■□□□□ 0.1
GPC3-201ENST00000370818 ERC2O15083 957 aa15.65■□□□□ 0.1
GPC3-201ENST00000370818 ANKRD13DQ6ZTN6 518 aa15.65■□□□□ 0.1
GPC3-201ENST00000370818 HSP90AB4PQ58FF6 505 aa15.64■□□□□ 0.09
GPC3-201ENST00000370818 DDX54Q8TDD1 881 aaKnown RBP15.64■□□□□ 0.09
GPC3-201ENST00000370818 HDAC5Q9UQL6 1122 aa15.64■□□□□ 0.09
GPC3-201ENST00000370818 PI4K2BQ8TCG2 481 aa15.64■□□□□ 0.09
GPC3-201ENST00000370818 BICC1Q9H694 974 aaKnown RBP15.64■□□□□ 0.09
GPC3-201ENST00000370818 REC8O95072 547 aa15.63■□□□□ 0.09
GPC3-201ENST00000370818 NEXNQ0ZGT2 675 aa15.63■□□□□ 0.09
GPC3-201ENST00000370818 GCKRQ14397 625 aa15.63■□□□□ 0.09
GPC3-201ENST00000370818 MYD88Q99836 296 aa15.63■□□□□ 0.09
GPC3-201ENST00000370818 PA2G4Q9UQ80 394 aaKnown RBP15.63■□□□□ 0.09
GPC3-201ENST00000370818 SHANK3Q9BYB0 1731 aa15.63■□□□□ 0.09
GPC3-201ENST00000370818 TRAK2O60296 914 aa15.63■□□□□ 0.09
GPC3-201ENST00000370818 DDIT3P35638 169 aa15.63■□□□□ 0.09
GPC3-201ENST00000370818 TRIM6-TRIM34B2RNG4 842 aa15.62■□□□□ 0.09
GPC3-201ENST00000370818 CHMLP26374 656 aa15.62■□□□□ 0.09
GPC3-201ENST00000370818 RILPL2Q969X0 211 aa15.62■□□□□ 0.09
GPC3-201ENST00000370818 GRPEL1Q9HAV7 217 aa15.62■□□□□ 0.09
GPC3-201ENST00000370818 NBPF26B4DH59 902 aa15.62■□□□□ 0.09
GPC3-201ENST00000370818 RBM10P98175 930 aaKnown RBP15.62■□□□□ 0.09
GPC3-201ENST00000370818 NBPF14Q5TI25 921 aa15.62■□□□□ 0.09
GPC3-201ENST00000370818 NBPF10Q6P3W6 841 aaKnown RBP15.62■□□□□ 0.09
GPC3-201ENST00000370818 NBPF15Q8N660 670 aa15.62■□□□□ 0.09
GPC3-201ENST00000370818 KCPQ6ZWJ8 1503 aa15.62■□□□□ 0.09
GPC3-201ENST00000370818 RABEP1Q15276 862 aa15.61■□□□□ 0.09
GPC3-201ENST00000370818 ESYT1Q9BSJ8 1104 aa15.61■□□□□ 0.09
GPC3-201ENST00000370818 BTG4Q9NY30 223 aa15.61■□□□□ 0.09
GPC3-201ENST00000370818 CHMP5Q9NZZ3 219 aa15.61■□□□□ 0.09
GPC3-201ENST00000370818 USP42Q9H9J4 1324 aaKnown RBP15.6■□□□□ 0.09
GPC3-201ENST00000370818 K7ELQ4 463 aaPredicted RBP15.6■□□□□ 0.09
GPC3-201ENST00000370818 OS9Q13438 667 aaPredicted RBP15.6■□□□□ 0.09
GPC3-201ENST00000370818 LAMB4A4D0S4 1761 aa15.6■□□□□ 0.09
GPC3-201ENST00000370818 UBR2Q8IWV8 1755 aa15.6■□□□□ 0.09
GPC3-201ENST00000370818 EPHA10Q5JZY3 1008 aa15.6■□□□□ 0.09
GPC3-201ENST00000370818 TNS2Q63HR2 1409 aa15.59■□□□□ 0.09
GPC3-201ENST00000370818 PAPPAQ13219 1627 aa15.59■□□□□ 0.09
GPC3-201ENST00000370818 PTCD1O75127 700 aaKnown RBP15.59■□□□□ 0.09
GPC3-201ENST00000370818 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.59■□□□□ 0.09
GPC3-201ENST00000370818 ERC1Q8IUD2 1116 aa15.58■□□□□ 0.09
GPC3-201ENST00000370818 CLASRPQ8N2M8 674 aaKnown RBP15.58■□□□□ 0.09
GPC3-201ENST00000370818 PLBD2Q8NHP8 589 aa15.58■□□□□ 0.09
GPC3-201ENST00000370818 SASH1O94885 1247 aa15.58■□□□□ 0.08
GPC3-201ENST00000370818 MAP4K4O95819 1239 aaPredicted RBP15.58■□□□□ 0.08
GPC3-201ENST00000370818 IL25Q9H293 177 aa15.58■□□□□ 0.08
GPC3-201ENST00000370818 ATP5J2-PTCD1G3V325 749 aa15.57■□□□□ 0.08
GPC3-201ENST00000370818 A1BGP04217 495 aa15.57■□□□□ 0.08
GPC3-201ENST00000370818 JARID2Q92833 1246 aaPredicted RBP15.57■□□□□ 0.08
GPC3-201ENST00000370818 TOGARAM1Q9Y4F4 1720 aa15.57■□□□□ 0.08
GPC3-201ENST00000370818 TTC41PQ6P2S7 1318 aa15.57■□□□□ 0.08
GPC3-201ENST00000370818 ROBO1Q9Y6N7 1651 aa15.57■□□□□ 0.08
GPC3-201ENST00000370818 ISY1Q9ULR0 285 aaKnown RBP15.57■□□□□ 0.08
GPC3-201ENST00000370818 TTLL7Q6ZT98 887 aa15.56■□□□□ 0.08
GPC3-201ENST00000370818 KIAA1211Q6ZU35 1233 aa15.56■□□□□ 0.08
GPC3-201ENST00000370818 KLHDC4Q8TBB5 520 aa15.56■□□□□ 0.08
GPC3-201ENST00000370818 ARFGEF2Q9Y6D5 1785 aa15.56■□□□□ 0.08
GPC3-201ENST00000370818 CASP7P55210 303 aa15.56■□□□□ 0.08
GPC3-201ENST00000370818 UBE3BQ7Z3V4 1068 aa15.56■□□□□ 0.08
GPC3-201ENST00000370818 TRIM44Q96DX7 344 aaPredicted RBP15.56■□□□□ 0.08
GPC3-201ENST00000370818 GLRX3O76003 335 aaKnown RBP15.55■□□□□ 0.08
GPC3-201ENST00000370818 COL15A1P39059 1388 aa15.55■□□□□ 0.08
GPC3-201ENST00000370818 DISP2A7MBM2 1401 aa15.55■□□□□ 0.08
GPC3-201ENST00000370818 AHDC1Q5TGY3 1603 aaPredicted RBP15.55■□□□□ 0.08
GPC3-201ENST00000370818 G3BP1Q13283 466 aaKnown RBP eCLIP15.55■□□□□ 0.08
GPC3-201ENST00000370818 RABL6Q3YEC7 729 aaPredicted RBP15.55■□□□□ 0.08
GPC3-201ENST00000370818 EAF2Q96CJ1 260 aaPredicted RBP15.55■□□□□ 0.08
GPC3-201ENST00000370818 ANO2Q9NQ90 1003 aa15.55■□□□□ 0.08
GPC3-201ENST00000370818 TMOD3Q9NYL9 352 aa15.55■□□□□ 0.08
GPC3-201ENST00000370818 A0A087WZG4 1122 aa15.54■□□□□ 0.08
GPC3-201ENST00000370818 AACSQ86V21 672 aa15.54■□□□□ 0.08
GPC3-201ENST00000370818 SIL1Q9H173 461 aa15.54■□□□□ 0.08
GPC3-201ENST00000370818 ECHDC1Q9NTX5 307 aa15.54■□□□□ 0.08
GPC3-201ENST00000370818 A0A0U1RQG5 324 aaPredicted RBP15.54■□□□□ 0.08
GPC3-201ENST00000370818 IFIT2P09913 472 aaKnown RBP15.54■□□□□ 0.08
GPC3-201ENST00000370818 RFX5P48382 616 aaPredicted RBP15.54■□□□□ 0.08
GPC3-201ENST00000370818 CNTROBQ8N137 903 aa15.54■□□□□ 0.08
GPC3-201ENST00000370818 PIGBQ92521 554 aa15.54■□□□□ 0.08
GPC3-201ENST00000370818 FOXD4L1Q9NU39 408 aa15.54■□□□□ 0.08
GPC3-201ENST00000370818 CIZ1Q9ULV3 898 aaPredicted RBP15.54■□□□□ 0.08
GPC3-201ENST00000370818 PALD1Q9ULE6 856 aa15.53■□□□□ 0.08
GPC3-201ENST00000370818 COL14A1Q05707 1796 aaKnown RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms