RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 PRAMEF22A3QJZ6 481 aa21.27■■□□□ 1
VMA21-202ENST00000370361 TPTE2Q6XPS3 522 aa21.27■■□□□ 1
VMA21-202ENST00000370361 MASTLQ96GX5 879 aa21.27■■□□□ 1
VMA21-202ENST00000370361 NMRK2Q9NPI5 230 aa21.27■■□□□ 1
VMA21-202ENST00000370361 MYBBP1AQ9BQG0 1328 aaKnown RBP21.27■□□□□ 0.99
VMA21-202ENST00000370361 LTBP3Q9NS15 1303 aa21.27■□□□□ 0.99
VMA21-202ENST00000370361 ARFGEF2Q9Y6D5 1785 aa21.26■□□□□ 0.99
VMA21-202ENST00000370361 NBPF26B4DH59 902 aa21.26■□□□□ 0.99
VMA21-202ENST00000370361 ERVV-1B6SEH8 477 aa21.26■□□□□ 0.99
VMA21-202ENST00000370361 SRGNP10124 158 aa21.26■□□□□ 0.99
VMA21-202ENST00000370361 APLP1P51693 650 aa21.26■□□□□ 0.99
VMA21-202ENST00000370361 NBPF10Q6P3W6 841 aaKnown RBP21.26■□□□□ 0.99
VMA21-202ENST00000370361 NBPF15Q8N660 670 aa21.26■□□□□ 0.99
VMA21-202ENST00000370361 COL11A2P13942 1736 aaPredicted RBP21.26■□□□□ 0.99
VMA21-202ENST00000370361 EIF4A1P60842 406 aaKnown RBP21.25■□□□□ 0.99
VMA21-202ENST00000370361 FSTL1Q12841 308 aa21.25■□□□□ 0.99
VMA21-202ENST00000370361 CEP350Q5VT06 3117 aa21.24■□□□□ 0.99
VMA21-202ENST00000370361 RASSF7Q02833 373 aa21.24■□□□□ 0.99
VMA21-202ENST00000370361 NIP7Q9Y221 180 aaKnown RBP eCLIP21.24■□□□□ 0.99
VMA21-202ENST00000370361 KLRG2A4D1S0 409 aaPredicted RBP21.23■□□□□ 0.99
VMA21-202ENST00000370361 PIP4K2AP48426 406 aaPredicted RBP21.23■□□□□ 0.99
VMA21-202ENST00000370361 KIF6Q6ZMV9 814 aa21.23■□□□□ 0.99
VMA21-202ENST00000370361 NYXQ9GZU5 481 aa21.23■□□□□ 0.99
VMA21-202ENST00000370361 MIS18AQ9NYP9 233 aa21.23■□□□□ 0.99
VMA21-202ENST00000370361 FER1L6Q2WGJ9 1857 aa21.23■□□□□ 0.99
VMA21-202ENST00000370361 TIAM2Q8IVF5 1701 aa21.22■□□□□ 0.99
VMA21-202ENST00000370361 GLTPD2A6NH11 291 aa21.22■□□□□ 0.99
VMA21-202ENST00000370361 NFKBIEO00221 500 aa21.22■□□□□ 0.99
VMA21-202ENST00000370361 NPR1P16066 1061 aa21.22■□□□□ 0.99
VMA21-202ENST00000370361 IBTKQ9P2D0 1353 aaPredicted RBP21.22■□□□□ 0.99
VMA21-202ENST00000370361 DPY19L2Q6NUT2 758 aa21.21■□□□□ 0.99
VMA21-202ENST00000370361 PRPF40BQ6NWY9 871 aaKnown RBP21.21■□□□□ 0.99
VMA21-202ENST00000370361 TAOK3Q9H2K8 898 aa21.21■□□□□ 0.99
VMA21-202ENST00000370361 TSPYL4Q9UJ04 414 aa21.21■□□□□ 0.99
VMA21-202ENST00000370361 DICER1Q9UPY3 1922 aaKnown RBP21.2■□□□□ 0.98
VMA21-202ENST00000370361 C21orf2O43822 256 aa21.2■□□□□ 0.98
VMA21-202ENST00000370361 RIPK4P57078 832 aa21.2■□□□□ 0.98
VMA21-202ENST00000370361 MAP3K15Q6ZN16 1313 aa21.2■□□□□ 0.98
VMA21-202ENST00000370361 VEGFAP15692 232 aaPredicted RBP21.19■□□□□ 0.98
VMA21-202ENST00000370361 DDX10Q13206 875 aaKnown RBP21.19■□□□□ 0.98
VMA21-202ENST00000370361 CCDC88AQ3V6T2 1871 aa21.19■□□□□ 0.98
VMA21-202ENST00000370361 RIC1Q4ADV7 1423 aa21.19■□□□□ 0.98
VMA21-202ENST00000370361 GTF2E1P29083 439 aaPredicted RBP21.18■□□□□ 0.98
VMA21-202ENST00000370361 ALDH1B1P30837 517 aa21.18■□□□□ 0.98
VMA21-202ENST00000370361 TMPOP42166 694 aaKnown RBP21.18■□□□□ 0.98
VMA21-202ENST00000370361 CCDC24Q8N4L8 307 aa21.18■□□□□ 0.98
VMA21-202ENST00000370361 SMC1BQ8NDV3 1235 aa21.18■□□□□ 0.98
VMA21-202ENST00000370361 THUMPD2Q9BTF0 503 aaKnown RBP21.18■□□□□ 0.98
VMA21-202ENST00000370361 RRAGCQ9HB90 399 aa21.18■□□□□ 0.98
VMA21-202ENST00000370361 WDR43Q15061 677 aaKnown RBP eCLIP21.17■□□□□ 0.98
VMA21-202ENST00000370361 ERFEQ4G0M1 354 aa21.17■□□□□ 0.98
VMA21-202ENST00000370361 CCDC93Q567U6 631 aa21.17■□□□□ 0.98
VMA21-202ENST00000370361 SLX4Q8IY92 1834 aa21.17■□□□□ 0.98
VMA21-202ENST00000370361 NUP98P52948 1817 aa21.16■□□□□ 0.98
VMA21-202ENST00000370361 PRELPP51888 382 aa21.16■□□□□ 0.98
VMA21-202ENST00000370361 HLFQ16534 295 aa21.16■□□□□ 0.98
VMA21-202ENST00000370361 RRP7AQ9Y3A4 280 aaKnown RBP21.16■□□□□ 0.98
VMA21-202ENST00000370361 WDR90Q96KV7 1748 aa21.15■□□□□ 0.98
VMA21-202ENST00000370361 RTKN2Q8IZC4 609 aa21.15■□□□□ 0.98
VMA21-202ENST00000370361 RUNDC1Q96C34 613 aa21.15■□□□□ 0.98
VMA21-202ENST00000370361 CACNA1SQ13698 1873 aa21.15■□□□□ 0.98
VMA21-202ENST00000370361 CRY2Q49AN0 593 aa21.14■□□□□ 0.97
VMA21-202ENST00000370361 GRIPAP1Q4V328 841 aa21.14■□□□□ 0.97
VMA21-202ENST00000370361 PARP10Q53GL7 1025 aa21.14■□□□□ 0.97
VMA21-202ENST00000370361 C7orf43Q8WVR3 580 aa21.14■□□□□ 0.97
VMA21-202ENST00000370361 MYL6BP14649 208 aa21.13■□□□□ 0.97
VMA21-202ENST00000370361 CC2D2BQ6DHV5 1058 aa21.13■□□□□ 0.97
VMA21-202ENST00000370361 GIGYF2Q6Y7W6 1299 aaKnown RBP21.13■□□□□ 0.97
VMA21-202ENST00000370361 RNF123Q5XPI4 1314 aa21.12■□□□□ 0.97
VMA21-202ENST00000370361 ZEB1P37275 1124 aaPredicted RBP21.12■□□□□ 0.97
VMA21-202ENST00000370361 PPP1R42Q7Z4L9 355 aa21.12■□□□□ 0.97
VMA21-202ENST00000370361 NGEFQ8N5V2 710 aa21.12■□□□□ 0.97
VMA21-202ENST00000370361 ZNF219Q9P2Y4 722 aaPredicted RBP21.12■□□□□ 0.97
VMA21-202ENST00000370361 FKBP4Q02790 459 aaKnown RBP eCLIP21.11■□□□□ 0.97
VMA21-202ENST00000370361 TTLL7Q6ZT98 887 aa21.11■□□□□ 0.97
VMA21-202ENST00000370361 HOXB7P09629 217 aa21.1■□□□□ 0.97
VMA21-202ENST00000370361 HSP90AB3PQ58FF7 597 aa21.1■□□□□ 0.97
VMA21-202ENST00000370361 ZNF34Q8IZ26 560 aa21.1■□□□□ 0.97
VMA21-202ENST00000370361 FAM177BA6PVY3 158 aa21.09■□□□□ 0.97
VMA21-202ENST00000370361 CHL1O00533 1208 aa21.09■□□□□ 0.97
VMA21-202ENST00000370361 ZBTB3Q9H5J0 574 aa21.09■□□□□ 0.97
VMA21-202ENST00000370361 PRKRIP1Q9H875 184 aaPredicted RBP21.09■□□□□ 0.97
VMA21-202ENST00000370361 IQCA1LA6NCM1 817 aa21.08■□□□□ 0.97
VMA21-202ENST00000370361 HOXA10P31260 410 aaPredicted RBP21.08■□□□□ 0.97
VMA21-202ENST00000370361 LRP10Q7Z4F1 713 aa21.08■□□□□ 0.97
VMA21-202ENST00000370361 RPGRQ92834 1020 aaKnown RBP21.08■□□□□ 0.97
VMA21-202ENST00000370361 EIF2S2P20042 333 aaKnown RBP21.07■□□□□ 0.96
VMA21-202ENST00000370361 PDIA6Q15084 440 aa21.07■□□□□ 0.96
VMA21-202ENST00000370361 PSMD1Q99460 953 aa21.07■□□□□ 0.96
VMA21-202ENST00000370361 ABCC12Q96J65 1359 aa21.07■□□□□ 0.96
VMA21-202ENST00000370361 UBN2Q6ZU65 1347 aa21.06■□□□□ 0.96
VMA21-202ENST00000370361 CALD1Q05682 793 aaKnown RBP21.06■□□□□ 0.96
VMA21-202ENST00000370361 DNAJC5GQ8N7S2 189 aa21.06■□□□□ 0.96
VMA21-202ENST00000370361 CRAMP1Q96RY5 1269 aa21.06■□□□□ 0.96
VMA21-202ENST00000370361 NTSR2O95665 410 aa21.05■□□□□ 0.96
VMA21-202ENST00000370361 GPTP24298 496 aa21.05■□□□□ 0.96
VMA21-202ENST00000370361 SUSD4Q5VX71 490 aa21.05■□□□□ 0.96
VMA21-202ENST00000370361 NUTM1Q86Y26 1132 aa21.05■□□□□ 0.96
VMA21-202ENST00000370361 CCDC146Q8IYE0 955 aa21.05■□□□□ 0.96
VMA21-202ENST00000370361 RBM17Q96I25 401 aaKnown RBP21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms