RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 CCDC155Q8N6L0 562 aa7.82□□□□□ -1.16
ECHDC1-204ENST00000368292 RETREG2Q8NC44 543 aa7.82□□□□□ -1.16
ECHDC1-204ENST00000368292 KDM5BQ9UGL1 1544 aa7.82□□□□□ -1.16
ECHDC1-204ENST00000368292 ZCCHC11Q5TAX3 1644 aaKnown RBP7.81□□□□□ -1.16
ECHDC1-204ENST00000368292 H3BM21 787 aa7.81□□□□□ -1.16
ECHDC1-204ENST00000368292 LCE2AQ5TA79 106 aaPredicted RBP7.81□□□□□ -1.16
ECHDC1-204ENST00000368292 TMEM214Q6NUQ4 689 aaKnown RBP7.81□□□□□ -1.16
ECHDC1-204ENST00000368292 TAS1R3Q7RTX0 852 aa7.81□□□□□ -1.16
ECHDC1-204ENST00000368292 RHBDD1Q8TEB9 315 aa7.81□□□□□ -1.16
ECHDC1-204ENST00000368292 SCHIP1Q9P0W5 487 aaPredicted RBP7.81□□□□□ -1.16
ECHDC1-204ENST00000368292 IQSEC2Q5JU85 1478 aa7.81□□□□□ -1.16
ECHDC1-204ENST00000368292 PHKA2P46019 1235 aa7.8□□□□□ -1.16
ECHDC1-204ENST00000368292 SEC13P55735 322 aa7.8□□□□□ -1.16
ECHDC1-204ENST00000368292 TSEN2Q8NCE0 465 aaKnown RBP7.8□□□□□ -1.16
ECHDC1-204ENST00000368292 PBXIP1Q96AQ6 731 aa7.8□□□□□ -1.16
ECHDC1-204ENST00000368292 CFAP43Q8NDM7 1665 aa7.79□□□□□ -1.16
ECHDC1-204ENST00000368292 YEATS2Q9ULM3 1422 aa7.79□□□□□ -1.16
ECHDC1-204ENST00000368292 ARAP3Q8WWN8 1544 aa7.79□□□□□ -1.16
ECHDC1-204ENST00000368292 SIGLEC1Q9BZZ2 1709 aa7.79□□□□□ -1.16
ECHDC1-204ENST00000368292 ZMIZ1Q9ULJ6 1067 aa7.79□□□□□ -1.16
ECHDC1-204ENST00000368292 DYRK1BQ9Y463 629 aa7.79□□□□□ -1.16
ECHDC1-204ENST00000368292 ATG7O95352 703 aa7.78□□□□□ -1.16
ECHDC1-204ENST00000368292 ITGA6P23229 1130 aa7.78□□□□□ -1.16
ECHDC1-204ENST00000368292 ELOAQ14241 798 aaKnown RBP7.78□□□□□ -1.16
ECHDC1-204ENST00000368292 GNASQ5JWF2 1037 aa7.78□□□□□ -1.16
ECHDC1-204ENST00000368292 TBCELQ5QJ74 424 aa7.78□□□□□ -1.16
ECHDC1-204ENST00000368292 TREML4Q6UXN2 200 aa7.78□□□□□ -1.16
ECHDC1-204ENST00000368292 TIMMDC1Q9NPL8 285 aa7.78□□□□□ -1.16
ECHDC1-204ENST00000368292 CUEDC1Q9NWM3 386 aaPredicted RBP7.78□□□□□ -1.16
ECHDC1-204ENST00000368292 NOVA2Q9UNW9 492 aaKnown RBP7.78□□□□□ -1.16
ECHDC1-204ENST00000368292 ERBB4Q15303 1308 aa7.78□□□□□ -1.16
ECHDC1-204ENST00000368292 FRMPD1Q5SYB0 1578 aa7.77□□□□□ -1.17
ECHDC1-204ENST00000368292 WDR7Q9Y4E6 1490 aa7.77□□□□□ -1.17
ECHDC1-204ENST00000368292 C21orf2O43822 256 aa7.77□□□□□ -1.17
ECHDC1-204ENST00000368292 GTF2E1P29083 439 aaPredicted RBP7.77□□□□□ -1.17
ECHDC1-204ENST00000368292 SLC9A9Q8IVB4 645 aa7.77□□□□□ -1.17
ECHDC1-204ENST00000368292 ZDHHC1Q8WTX9 485 aa7.77□□□□□ -1.17
ECHDC1-204ENST00000368292 NIFKQ9BYG3 293 aaKnown RBP7.77□□□□□ -1.17
ECHDC1-204ENST00000368292 TSPAN10Q9H1Z9 355 aaPredicted RBP7.77□□□□□ -1.17
ECHDC1-204ENST00000368292 CD109Q6YHK3 1445 aa7.77□□□□□ -1.17
ECHDC1-204ENST00000368292 PREX1Q8TCU6 1659 aa7.76□□□□□ -1.17
ECHDC1-204ENST00000368292 LGR5O75473 907 aa7.76□□□□□ -1.17
ECHDC1-204ENST00000368292 WFS1O76024 890 aa7.76□□□□□ -1.17
ECHDC1-204ENST00000368292 FAM200AQ8TCP9 573 aa7.76□□□□□ -1.17
ECHDC1-204ENST00000368292 RBM19Q9Y4C8 960 aaKnown RBP7.76□□□□□ -1.17
ECHDC1-204ENST00000368292 UACAQ9BZF9 1416 aa7.76□□□□□ -1.17
ECHDC1-204ENST00000368292 ACIN1Q9UKV3 1341 aaKnown RBP7.76□□□□□ -1.17
ECHDC1-204ENST00000368292 TNIKQ9UKE5 1360 aa7.75□□□□□ -1.17
ECHDC1-204ENST00000368292 VSIG8P0DPA2 414 aa7.75□□□□□ -1.17
ECHDC1-204ENST00000368292 PLA2G4AP47712 749 aa7.75□□□□□ -1.17
ECHDC1-204ENST00000368292 TEAD4Q15561 434 aa7.75□□□□□ -1.17
ECHDC1-204ENST00000368292 STK32AQ8WU08 396 aa7.75□□□□□ -1.17
ECHDC1-204ENST00000368292 NANOS1Q8WY41 292 aaKnown RBP7.75□□□□□ -1.17
ECHDC1-204ENST00000368292 GAS2L1Q99501 681 aaPredicted RBP7.75□□□□□ -1.17
ECHDC1-204ENST00000368292 CABP1Q9NZU7 370 aa7.75□□□□□ -1.17
ECHDC1-204ENST00000368292 PARP3Q9Y6F1 533 aa7.75□□□□□ -1.17
ECHDC1-204ENST00000368292 WRNQ14191 1432 aaPredicted RBP eCLIP7.75□□□□□ -1.17
ECHDC1-204ENST00000368292 A0A1B0GTH6 734 aa7.74□□□□□ -1.17
ECHDC1-204ENST00000368292 ZBTB7CA1YPR0 619 aa7.74□□□□□ -1.17
ECHDC1-204ENST00000368292 F11P03951 625 aa7.74□□□□□ -1.17
ECHDC1-204ENST00000368292 THBS1P07996 1170 aa7.74□□□□□ -1.17
ECHDC1-204ENST00000368292 MSX1P28360 303 aa7.74□□□□□ -1.17
ECHDC1-204ENST00000368292 DBN1Q16643 649 aa7.74□□□□□ -1.17
ECHDC1-204ENST00000368292 SH3PXD2AQ5TCZ1 1133 aa7.74□□□□□ -1.17
ECHDC1-204ENST00000368292 POTEAQ6S8J7 498 aa7.74□□□□□ -1.17
ECHDC1-204ENST00000368292 GPR161Q8N6U8 529 aaKnown RBP7.74□□□□□ -1.17
ECHDC1-204ENST00000368292 SLC16A10Q8TF71 515 aa7.74□□□□□ -1.17
ECHDC1-204ENST00000368292 HINFPQ9BQA5 517 aa7.74□□□□□ -1.17
ECHDC1-204ENST00000368292 TTC37Q6PGP7 1564 aa7.74□□□□□ -1.17
ECHDC1-204ENST00000368292 ATAD2Q6PL18 1390 aa7.73□□□□□ -1.17
ECHDC1-204ENST00000368292 PTPRTO14522 1441 aa7.73□□□□□ -1.17
ECHDC1-204ENST00000368292 LOC105371045A0A1W2PR82 267 aa7.73□□□□□ -1.17
ECHDC1-204ENST00000368292 ATP4AP20648 1035 aa7.73□□□□□ -1.17
ECHDC1-204ENST00000368292 NOS2P35228 1153 aa7.73□□□□□ -1.17
ECHDC1-204ENST00000368292 TMEM164Q5U3C3 297 aa7.73□□□□□ -1.17
ECHDC1-204ENST00000368292 VWA5B2Q8N398 1253 aa7.73□□□□□ -1.17
ECHDC1-204ENST00000368292 GAS2L2Q8NHY3 880 aa7.73□□□□□ -1.17
ECHDC1-204ENST00000368292 L3MBTL2Q969R5 705 aa7.73□□□□□ -1.17
ECHDC1-204ENST00000368292 ARHGEF40Q8TER5 1519 aa7.73□□□□□ -1.17
ECHDC1-204ENST00000368292 EML1O00423 815 aa7.72□□□□□ -1.17
ECHDC1-204ENST00000368292 PSMA6P60900 246 aaKnown RBP7.72□□□□□ -1.17
ECHDC1-204ENST00000368292 RIPOR1Q6ZS17 1223 aa7.72□□□□□ -1.17
ECHDC1-204ENST00000368292 TRIM22Q8IYM9 498 aa7.72□□□□□ -1.17
ECHDC1-204ENST00000368292 C7orf43Q8WVR3 580 aa7.72□□□□□ -1.17
ECHDC1-204ENST00000368292 SCG3Q8WXD2 468 aaKnown RBP7.72□□□□□ -1.17
ECHDC1-204ENST00000368292 IRF7Q92985 503 aa7.72□□□□□ -1.17
ECHDC1-204ENST00000368292 ZNF837Q96EG3 531 aaPredicted RBP7.72□□□□□ -1.17
ECHDC1-204ENST00000368292 GPAMQ9HCL2 828 aa7.72□□□□□ -1.17
ECHDC1-204ENST00000368292 FER1L4A9Z1Z3 1794 aa7.71□□□□□ -1.17
ECHDC1-204ENST00000368292 SERTM1A2A2V5 107 aa7.71□□□□□ -1.18
ECHDC1-204ENST00000368292 WEE1P30291 646 aa7.71□□□□□ -1.18
ECHDC1-204ENST00000368292 HSPA1LP34931 641 aa7.71□□□□□ -1.18
ECHDC1-204ENST00000368292 TXLNAP40222 546 aa7.71□□□□□ -1.18
ECHDC1-204ENST00000368292 KCTD17Q8N5Z5 321 aa7.71□□□□□ -1.18
ECHDC1-204ENST00000368292 AIDAQ96BJ3 306 aa7.71□□□□□ -1.18
ECHDC1-204ENST00000368292 ARID4BQ4LE39 1312 aaPredicted RBP7.71□□□□□ -1.18
ECHDC1-204ENST00000368292 BIVM-ERCC5R4GMW8 1640 aa7.7□□□□□ -1.18
ECHDC1-204ENST00000368292 UBAP1LF5GYI3 381 aa7.7□□□□□ -1.18
ECHDC1-204ENST00000368292 PPP1R12BO60237 982 aaPredicted RBP7.7□□□□□ -1.18
ECHDC1-204ENST00000368292 RAPGEF3O95398 923 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms