RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 KCNQ3O43525 872 aa17.2■□□□□ 0.34
USF1-202ENST00000368020 FRAT2O75474 233 aaPredicted RBP17.2■□□□□ 0.34
USF1-202ENST00000368020 DDX21Q9NR30 783 aaKnown RBP eCLIP17.2■□□□□ 0.34
USF1-202ENST00000368020 AK9Q5TCS8 1911 aa17.2■□□□□ 0.34
USF1-202ENST00000368020 ERC2O15083 957 aa17.19■□□□□ 0.34
USF1-202ENST00000368020 EPB41L2O43491 1005 aaKnown RBP17.19■□□□□ 0.34
USF1-202ENST00000368020 MTX1Q13505 466 aa17.19■□□□□ 0.34
USF1-202ENST00000368020 GSE1Q14687 1217 aa17.19■□□□□ 0.34
USF1-202ENST00000368020 ZNF790Q6PG37 636 aa17.19■□□□□ 0.34
USF1-202ENST00000368020 OTUD7AQ8TE49 926 aaPredicted RBP17.19■□□□□ 0.34
USF1-202ENST00000368020 KIF2CQ99661 725 aa17.19■□□□□ 0.34
USF1-202ENST00000368020 LAMB4A4D0S4 1761 aa17.19■□□□□ 0.34
USF1-202ENST00000368020 KIF1BPQ96EK5 621 aa17.18■□□□□ 0.34
USF1-202ENST00000368020 USP26Q9BXU7 913 aa17.18■□□□□ 0.34
USF1-202ENST00000368020 C5P01031 1676 aa17.18■□□□□ 0.34
USF1-202ENST00000368020 K7ELQ4 463 aaPredicted RBP17.18■□□□□ 0.34
USF1-202ENST00000368020 PPP1R42Q7Z4L9 355 aa17.18■□□□□ 0.34
USF1-202ENST00000368020 MARCH10Q8NA82 808 aaPredicted RBP17.18■□□□□ 0.34
USF1-202ENST00000368020 RGS17Q9UGC6 210 aaPredicted RBP17.18■□□□□ 0.34
USF1-202ENST00000368020 KAT6BQ8WYB5 2073 aa17.17■□□□□ 0.34
USF1-202ENST00000368020 SEPT12Q8IYM1 358 aa17.17■□□□□ 0.34
USF1-202ENST00000368020 LINS1Q8NG48 757 aa17.17■□□□□ 0.34
USF1-202ENST00000368020 SRGAP3O43295 1099 aa17.16■□□□□ 0.34
USF1-202ENST00000368020 CABP4P57796 275 aa17.16■□□□□ 0.34
USF1-202ENST00000368020 NFATC2IPQ8NCF5 419 aa17.16■□□□□ 0.34
USF1-202ENST00000368020 C9orf78Q9NZ63 289 aaPredicted RBP17.16■□□□□ 0.34
USF1-202ENST00000368020 MAP3K2Q9Y2U5 619 aa17.16■□□□□ 0.34
USF1-202ENST00000368020 BCL9O00512 1426 aa17.16■□□□□ 0.34
USF1-202ENST00000368020 A0A0G2JS52 829 aa17.16■□□□□ 0.34
USF1-202ENST00000368020 HSP90AA1P07900 732 aaKnown RBP17.16■□□□□ 0.34
USF1-202ENST00000368020 ERC1Q8IUD2 1116 aa17.16■□□□□ 0.34
USF1-202ENST00000368020 TTC5Q8N0Z6 440 aa17.16■□□□□ 0.34
USF1-202ENST00000368020 UTYO14607 1347 aa17.15■□□□□ 0.34
USF1-202ENST00000368020 SURF6O75683 361 aaKnown RBP17.15■□□□□ 0.34
USF1-202ENST00000368020 MCCP23508 829 aa17.15■□□□□ 0.34
USF1-202ENST00000368020 RXRBP28702 533 aa17.15■□□□□ 0.34
USF1-202ENST00000368020 ST18O60284 1047 aa17.14■□□□□ 0.33
USF1-202ENST00000368020 NBPF7P0C2Y1 421 aaPredicted RBP17.14■□□□□ 0.33
USF1-202ENST00000368020 PTMSP20962 102 aa17.14■□□□□ 0.33
USF1-202ENST00000368020 NEXNQ0ZGT2 675 aa17.14■□□□□ 0.33
USF1-202ENST00000368020 SNRPA1P09661 255 aaKnown RBP17.13■□□□□ 0.33
USF1-202ENST00000368020 DDIT3P35638 169 aa17.13■□□□□ 0.33
USF1-202ENST00000368020 RHPN1Q8TCX5 695 aa17.13■□□□□ 0.33
USF1-202ENST00000368020 TOGARAM1Q9Y4F4 1720 aa17.13■□□□□ 0.33
USF1-202ENST00000368020 FMNL2Q96PY5 1086 aa17.13■□□□□ 0.33
USF1-202ENST00000368020 BCL11AQ9H165 835 aa17.13■□□□□ 0.33
USF1-202ENST00000368020 ERBB4Q15303 1308 aa17.12■□□□□ 0.33
USF1-202ENST00000368020 TTC41PQ6P2S7 1318 aa17.12■□□□□ 0.33
USF1-202ENST00000368020 USP42Q9H9J4 1324 aaKnown RBP17.12■□□□□ 0.33
USF1-202ENST00000368020 DDX11L8A8MPP1 907 aa17.12■□□□□ 0.33
USF1-202ENST00000368020 GRM8O00222 908 aa17.12■□□□□ 0.33
USF1-202ENST00000368020 TMOD3Q9NYL9 352 aa17.12■□□□□ 0.33
USF1-202ENST00000368020 ITGB4P16144 1822 aa17.12■□□□□ 0.33
USF1-202ENST00000368020 ANAPC15P60006 121 aa17.11■□□□□ 0.33
USF1-202ENST00000368020 GPATCH3Q96I76 525 aa17.11■□□□□ 0.33
USF1-202ENST00000368020 TRIM6-TRIM34B2RNG4 842 aa17.1■□□□□ 0.33
USF1-202ENST00000368020 ANXA1P04083 346 aa17.1■□□□□ 0.33
USF1-202ENST00000368020 PDIA6Q15084 440 aa17.1■□□□□ 0.33
USF1-202ENST00000368020 POTEAQ6S8J7 498 aa17.1■□□□□ 0.33
USF1-202ENST00000368020 ESYT1Q9BSJ8 1104 aa17.1■□□□□ 0.33
USF1-202ENST00000368020 UBR2Q8IWV8 1755 aa17.1■□□□□ 0.33
USF1-202ENST00000368020 MCM2P49736 904 aa17.1■□□□□ 0.33
USF1-202ENST00000368020 OS9Q13438 667 aaPredicted RBP17.1■□□□□ 0.33
USF1-202ENST00000368020 PROSER3Q2NL68 480 aa17.1■□□□□ 0.33
USF1-202ENST00000368020 RIC3Q7Z5B4 369 aa17.1■□□□□ 0.33
USF1-202ENST00000368020 GBP4Q96PP9 640 aa17.1■□□□□ 0.33
USF1-202ENST00000368020 CHMLP26374 656 aa17.09■□□□□ 0.33
USF1-202ENST00000368020 MCM4P33991 863 aa17.09■□□□□ 0.33
USF1-202ENST00000368020 ILDR2Q71H61 639 aa17.09■□□□□ 0.33
USF1-202ENST00000368020 KRT27Q7Z3Y8 459 aa17.09■□□□□ 0.33
USF1-202ENST00000368020 CNTROBQ8N137 903 aa17.09■□□□□ 0.33
USF1-202ENST00000368020 CLASRPQ8N2M8 674 aaKnown RBP17.09■□□□□ 0.33
USF1-202ENST00000368020 SPRYD3Q8NCJ5 442 aa17.09■□□□□ 0.33
USF1-202ENST00000368020 DOT1LQ8TEK3 1739 aa17.09■□□□□ 0.33
USF1-202ENST00000368020 PIGBQ92521 554 aa17.09■□□□□ 0.33
USF1-202ENST00000368020 AFDNP55196 1824 aaKnown RBP17.09■□□□□ 0.33
USF1-202ENST00000368020 BRWD3Q6RI45 1802 aa17.08■□□□□ 0.33
USF1-202ENST00000368020 PRIM1P49642 420 aaKnown RBP17.08■□□□□ 0.32
USF1-202ENST00000368020 ARFGEF2Q9Y6D5 1785 aa17.08■□□□□ 0.32
USF1-202ENST00000368020 COL15A1P39059 1388 aa17.08■□□□□ 0.32
USF1-202ENST00000368020 PAPPAQ13219 1627 aa17.08■□□□□ 0.32
USF1-202ENST00000368020 GLRX3O76003 335 aaKnown RBP17.07■□□□□ 0.32
USF1-202ENST00000368020 RILPL2Q969X0 211 aa17.07■□□□□ 0.32
USF1-202ENST00000368020 IL17RAQ96F46 866 aa17.07■□□□□ 0.32
USF1-202ENST00000368020 ZNF496Q96IT1 587 aaPredicted RBP17.07■□□□□ 0.32
USF1-202ENST00000368020 METTL22Q9BUU2 404 aaPredicted RBP17.07■□□□□ 0.32
USF1-202ENST00000368020 CWC22Q9HCG8 908 aaKnown RBP17.07■□□□□ 0.32
USF1-202ENST00000368020 SLC39A6Q13433 755 aa17.07■□□□□ 0.32
USF1-202ENST00000368020 RAB3GAP1Q15042 981 aa17.07■□□□□ 0.32
USF1-202ENST00000368020 FAM196AQ6ZSG2 479 aa17.07■□□□□ 0.32
USF1-202ENST00000368020 IL1RAPL2Q9NP60 686 aa17.07■□□□□ 0.32
USF1-202ENST00000368020 PRAMEF22A3QJZ6 481 aa17.06■□□□□ 0.32
USF1-202ENST00000368020 CWF19L2Q2TBE0 894 aaKnown RBP17.05■□□□□ 0.32
USF1-202ENST00000368020 ANKRD13DQ6ZTN6 518 aa17.05■□□□□ 0.32
USF1-202ENST00000368020 PI4K2BQ8TCG2 481 aa17.05■□□□□ 0.32
USF1-202ENST00000368020 NEURL1BA8MQ27 555 aa17.04■□□□□ 0.32
USF1-202ENST00000368020 AIMP1Q12904 312 aaKnown RBP17.04■□□□□ 0.32
USF1-202ENST00000368020 XAGE3Q8WTP9 111 aa17.04■□□□□ 0.32
USF1-202ENST00000368020 SYTL4Q96C24 671 aaPredicted RBP17.04■□□□□ 0.32
USF1-202ENST00000368020 SBF2Q86WG5 1849 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms