RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 ANKRD44Q8N8A2 993 aa13.97□□□□□ -0.17
CDC42BPA-203ENST00000366766 BAG4O95429 457 aaKnown RBP13.97□□□□□ -0.17
CDC42BPA-203ENST00000366766 KDM5DQ9BY66 1539 aa13.97□□□□□ -0.17
CDC42BPA-203ENST00000366766 JAKMIP3Q5VZ66 844 aa13.97□□□□□ -0.17
CDC42BPA-203ENST00000366766 FLT4P35916 1363 aa13.96□□□□□ -0.17
CDC42BPA-203ENST00000366766 POLR1AO95602 1720 aaPredicted RBP13.96□□□□□ -0.17
CDC42BPA-203ENST00000366766 TRIM21P19474 475 aaKnown RBP13.96□□□□□ -0.17
CDC42BPA-203ENST00000366766 EIF5P55010 431 aaKnown RBP13.96□□□□□ -0.17
CDC42BPA-203ENST00000366766 SPA17Q15506 151 aa13.96□□□□□ -0.17
CDC42BPA-203ENST00000366766 KIAA1328Q86T90 577 aa13.96□□□□□ -0.17
CDC42BPA-203ENST00000366766 CETN2P41208 172 aa13.96□□□□□ -0.17
CDC42BPA-203ENST00000366766 IDH1O75874 414 aaKnown RBP13.96□□□□□ -0.17
CDC42BPA-203ENST00000366766 NME9Q86XW9 330 aa13.96□□□□□ -0.17
CDC42BPA-203ENST00000366766 SLC12A7Q9Y666 1083 aa13.96□□□□□ -0.17
CDC42BPA-203ENST00000366766 PDCL3Q9H2J4 239 aa13.96□□□□□ -0.17
CDC42BPA-203ENST00000366766 BLMP54132 1417 aaPredicted RBP13.96□□□□□ -0.17
CDC42BPA-203ENST00000366766 CCDC178Q5BJE1 867 aa13.96□□□□□ -0.17
CDC42BPA-203ENST00000366766 ZFYVE27Q5T4F4 411 aa13.96□□□□□ -0.18
CDC42BPA-203ENST00000366766 ATL3Q6DD88 541 aa13.96□□□□□ -0.18
CDC42BPA-203ENST00000366766 FAM114A1Q8IWE2 563 aa13.96□□□□□ -0.18
CDC42BPA-203ENST00000366766 TOP1P11387 765 aaKnown RBP13.96□□□□□ -0.18
CDC42BPA-203ENST00000366766 TMTC2Q8N394 836 aa13.96□□□□□ -0.18
CDC42BPA-203ENST00000366766 POTEJP0CG39 1038 aa13.95□□□□□ -0.18
CDC42BPA-203ENST00000366766 SYNMO15061 1565 aa13.95□□□□□ -0.18
CDC42BPA-203ENST00000366766 CRACR2AQ9BSW2 395 aa13.95□□□□□ -0.18
CDC42BPA-203ENST00000366766 CLIP2Q9UDT6 1046 aa13.95□□□□□ -0.18
CDC42BPA-203ENST00000366766 TMEM266Q2M3C6 531 aa13.95□□□□□ -0.18
CDC42BPA-203ENST00000366766 NUTM1Q86Y26 1132 aa13.95□□□□□ -0.18
CDC42BPA-203ENST00000366766 TAF4BQ92750 862 aa13.95□□□□□ -0.18
CDC42BPA-203ENST00000366766 NPATQ14207 1427 aa13.95□□□□□ -0.18
CDC42BPA-203ENST00000366766 CCDC171Q6TFL3 1326 aa13.95□□□□□ -0.18
CDC42BPA-203ENST00000366766 TSG101Q99816 390 aa13.95□□□□□ -0.18
CDC42BPA-203ENST00000366766 RAI14Q9P0K7 980 aa13.95□□□□□ -0.18
CDC42BPA-203ENST00000366766 ZNF213O14771 459 aa13.95□□□□□ -0.18
CDC42BPA-203ENST00000366766 TTLL5Q6EMB2 1281 aa13.95□□□□□ -0.18
CDC42BPA-203ENST00000366766 LRRC27Q9C0I9 530 aa13.95□□□□□ -0.18
CDC42BPA-203ENST00000366766 WAPLQ7Z5K2 1190 aa13.95□□□□□ -0.18
CDC42BPA-203ENST00000366766 CATIPQ7Z7H3 387 aa13.95□□□□□ -0.18
CDC42BPA-203ENST00000366766 KCNG4Q8TDN1 519 aa13.95□□□□□ -0.18
CDC42BPA-203ENST00000366766 TNIP1Q15025 636 aa13.94□□□□□ -0.18
CDC42BPA-203ENST00000366766 EMILIN1Q9Y6C2 1016 aa13.94□□□□□ -0.18
CDC42BPA-203ENST00000366766 AMPD3Q01432 767 aa13.94□□□□□ -0.18
CDC42BPA-203ENST00000366766 CWC25Q9NXE8 425 aaPredicted RBP13.94□□□□□ -0.18
CDC42BPA-203ENST00000366766 RBM27Q9P2N5 1060 aaKnown RBP13.94□□□□□ -0.18
CDC42BPA-203ENST00000366766 SETD1BQ9UPS6 1966 aaKnown RBP13.94□□□□□ -0.18
CDC42BPA-203ENST00000366766 ANKRD18BA2A2Z9 1011 aa13.93□□□□□ -0.18
CDC42BPA-203ENST00000366766 GOLGA8BA8MQT2 603 aa13.93□□□□□ -0.18
CDC42BPA-203ENST00000366766 MAP4K4O95819 1239 aaPredicted RBP13.93□□□□□ -0.18
CDC42BPA-203ENST00000366766 DDX54Q8TDD1 881 aaKnown RBP13.93□□□□□ -0.18
CDC42BPA-203ENST00000366766 AMOTL2Q9Y2J4 779 aa13.93□□□□□ -0.18
CDC42BPA-203ENST00000366766 RAD50Q92878 1312 aa13.93□□□□□ -0.18
CDC42BPA-203ENST00000366766 RIMS2Q9UQ26 1411 aa13.93□□□□□ -0.18
CDC42BPA-203ENST00000366766 AOX1Q06278 1338 aa13.93□□□□□ -0.18
CDC42BPA-203ENST00000366766 THUMPD2Q9BTF0 503 aaKnown RBP13.93□□□□□ -0.18
CDC42BPA-203ENST00000366766 SPTY2D1Q68D10 685 aaPredicted RBP13.93□□□□□ -0.18
CDC42BPA-203ENST00000366766 TESK2Q96S53 571 aa13.93□□□□□ -0.18
CDC42BPA-203ENST00000366766 TANGO6Q9C0B7 1094 aa13.93□□□□□ -0.18
CDC42BPA-203ENST00000366766 CNNM2Q9H8M5 875 aa13.93□□□□□ -0.18
CDC42BPA-203ENST00000366766 USO1O60763 962 aaKnown RBP13.92□□□□□ -0.18
CDC42BPA-203ENST00000366766 SSRP1Q08945 709 aaKnown RBP13.92□□□□□ -0.18
CDC42BPA-203ENST00000366766 SMC5Q8IY18 1101 aa13.92□□□□□ -0.18
CDC42BPA-203ENST00000366766 TRAPPC8Q9Y2L5 1435 aa13.92□□□□□ -0.18
CDC42BPA-203ENST00000366766 LRSAM1Q6UWE0 723 aa13.92□□□□□ -0.18
CDC42BPA-203ENST00000366766 GOLIM4O00461 696 aa13.92□□□□□ -0.18
CDC42BPA-203ENST00000366766 CTAGE1Q96RT6 745 aa13.92□□□□□ -0.18
CDC42BPA-203ENST00000366766 CLASP1Q7Z460 1538 aa13.92□□□□□ -0.18
CDC42BPA-203ENST00000366766 SNRPA1P09661 255 aaKnown RBP13.92□□□□□ -0.18
CDC42BPA-203ENST00000366766 IFNL2Q8IZJ0 200 aa13.92□□□□□ -0.18
CDC42BPA-203ENST00000366766 CDC5LQ99459 802 aaKnown RBP13.92□□□□□ -0.18
CDC42BPA-203ENST00000366766 BOLA2Q9H3K6 86 aa13.92□□□□□ -0.18
CDC42BPA-203ENST00000366766 PPP1R42Q7Z4L9 355 aa13.92□□□□□ -0.18
CDC42BPA-203ENST00000366766 TMOD2Q9NZR1 351 aa13.92□□□□□ -0.18
CDC42BPA-203ENST00000366766 EZRP15311 586 aaKnown RBP13.92□□□□□ -0.18
CDC42BPA-203ENST00000366766 YEATS4O95619 227 aa13.92□□□□□ -0.18
CDC42BPA-203ENST00000366766 SEPT7Q16181 437 aaKnown RBP13.92□□□□□ -0.18
CDC42BPA-203ENST00000366766 ZSCAN22P10073 491 aaPredicted RBP13.91□□□□□ -0.18
CDC42BPA-203ENST00000366766 ZNF165P49910 485 aa13.91□□□□□ -0.18
CDC42BPA-203ENST00000366766 CADPS2Q86UW7 1296 aa13.91□□□□□ -0.18
CDC42BPA-203ENST00000366766 TRAF1Q13077 416 aa13.91□□□□□ -0.18
CDC42BPA-203ENST00000366766 NCOA7Q8NI08 942 aa13.91□□□□□ -0.18
CDC42BPA-203ENST00000366766 RMND1Q9NWS8 449 aa13.91□□□□□ -0.18
CDC42BPA-203ENST00000366766 EHMT1Q9H9B1 1298 aa13.91□□□□□ -0.18
CDC42BPA-203ENST00000366766 INCENPQ9NQS7 918 aa13.91□□□□□ -0.18
CDC42BPA-203ENST00000366766 SBNO2Q9Y2G9 1366 aa13.91□□□□□ -0.18
CDC42BPA-203ENST00000366766 NAA15Q9BXJ9 866 aaKnown RBP13.91□□□□□ -0.18
CDC42BPA-203ENST00000366766 UQCRFS1P1P0C7P4 283 aa13.91□□□□□ -0.18
CDC42BPA-203ENST00000366766 SRRTQ9BXP5 876 aaKnown RBP13.91□□□□□ -0.18
CDC42BPA-203ENST00000366766 EDC4Q6P2E9 1401 aaKnown RBP13.91□□□□□ -0.18
CDC42BPA-203ENST00000366766 SSFA2P28290 1259 aa13.9□□□□□ -0.18
CDC42BPA-203ENST00000366766 ALS2CR12Q96Q35 445 aa13.9□□□□□ -0.18
CDC42BPA-203ENST00000366766 TUBBP07437 444 aa13.9□□□□□ -0.18
CDC42BPA-203ENST00000366766 CASQ1P31415 396 aa13.9□□□□□ -0.18
CDC42BPA-203ENST00000366766 PDE4BQ07343 736 aa13.9□□□□□ -0.18
CDC42BPA-203ENST00000366766 SPAG1Q07617 926 aa13.9□□□□□ -0.18
CDC42BPA-203ENST00000366766 GBP2P32456 591 aaPredicted RBP13.9□□□□□ -0.18
CDC42BPA-203ENST00000366766 FAM200AQ8TCP9 573 aa13.9□□□□□ -0.18
CDC42BPA-203ENST00000366766 PDE1AP54750 535 aa13.9□□□□□ -0.18
CDC42BPA-203ENST00000366766 CNNM3Q8NE01 707 aa13.9□□□□□ -0.18
CDC42BPA-203ENST00000366766 KRT23Q9C075 422 aa13.9□□□□□ -0.18
CDC42BPA-203ENST00000366766 KIF24Q5T7B8 1368 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms