RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 MKNK1Q9BUB5 465 aa6.27□□□□□ -1.41
RNU4-48P-201ENST00000365559 HCN2Q9UL51 889 aa6.27□□□□□ -1.41
RNU4-48P-201ENST00000365559 BNIP3LO60238 219 aa6.26□□□□□ -1.41
RNU4-48P-201ENST00000365559 SCNN1AP37088 669 aa6.26□□□□□ -1.41
RNU4-48P-201ENST00000365559 RTN1Q16799 776 aa6.26□□□□□ -1.41
RNU4-48P-201ENST00000365559 VTI1AQ96AJ9 217 aa6.26□□□□□ -1.41
RNU4-48P-201ENST00000365559 ABHD17AQ96GS6 310 aa6.26□□□□□ -1.41
RNU4-48P-201ENST00000365559 SUSD3Q96L08 255 aa6.26□□□□□ -1.41
RNU4-48P-201ENST00000365559 CNTNAP3BQ96NU0 1288 aa6.26□□□□□ -1.41
RNU4-48P-201ENST00000365559 TRERF1Q96PN7 1200 aa6.26□□□□□ -1.41
RNU4-48P-201ENST00000365559 CNTNAP3Q9BZ76 1288 aa6.26□□□□□ -1.41
RNU4-48P-201ENST00000365559 NDFIP2Q9NV92 336 aa6.26□□□□□ -1.41
RNU4-48P-201ENST00000365559 GPC6Q9Y625 555 aaPredicted RBP6.26□□□□□ -1.41
RNU4-48P-201ENST00000365559 GJA3Q9Y6H8 435 aa6.26□□□□□ -1.41
RNU4-48P-201ENST00000365559 DCDC2BA2VCK2 349 aa6.25□□□□□ -1.41
RNU4-48P-201ENST00000365559 ATXN7O15265 892 aaPredicted RBP6.25□□□□□ -1.41
RNU4-48P-201ENST00000365559 WIPF1O43516 503 aa6.25□□□□□ -1.41
RNU4-48P-201ENST00000365559 PHLDB3Q6NSJ2 640 aa6.25□□□□□ -1.41
RNU4-48P-201ENST00000365559 FIGNL1Q6PIW4 674 aa6.25□□□□□ -1.41
RNU4-48P-201ENST00000365559 CFHR5Q9BXR6 569 aa6.25□□□□□ -1.41
RNU4-48P-201ENST00000365559 KLK14Q9P0G3 267 aa6.25□□□□□ -1.41
RNU4-48P-201ENST00000365559 LRFN2Q9ULH4 789 aa6.25□□□□□ -1.41
RNU4-48P-201ENST00000365559 BCS1LQ9Y276 419 aa6.25□□□□□ -1.41
RNU4-48P-201ENST00000365559 USTQ9Y2C2 406 aa6.25□□□□□ -1.41
RNU4-48P-201ENST00000365559 PCDHGC4Q9Y5F7 938 aa6.25□□□□□ -1.41
RNU4-48P-201ENST00000365559 SSFA2P28290 1259 aa6.24□□□□□ -1.41
RNU4-48P-201ENST00000365559 TNP2Q05952 138 aa6.24□□□□□ -1.41
RNU4-48P-201ENST00000365559 NAA30Q147X3 362 aaPredicted RBP6.24□□□□□ -1.41
RNU4-48P-201ENST00000365559 SAMD5Q5TGI4 173 aa6.24□□□□□ -1.41
RNU4-48P-201ENST00000365559 SAP130Q9H0E3 1048 aa6.24□□□□□ -1.41
RNU4-48P-201ENST00000365559 NEUROD4Q9HD90 331 aa6.24□□□□□ -1.41
RNU4-48P-201ENST00000365559 ATXN7L1Q9ULK2 861 aaPredicted RBP6.24□□□□□ -1.41
RNU4-48P-201ENST00000365559 KHNYNO15037 678 aaKnown RBP6.23□□□□□ -1.41
RNU4-48P-201ENST00000365559 MAPTP10636 758 aaKnown RBP6.23□□□□□ -1.41
RNU4-48P-201ENST00000365559 DGKZQ13574 1117 aa6.23□□□□□ -1.41
RNU4-48P-201ENST00000365559 COX20Q5RI15 118 aa6.23□□□□□ -1.41
RNU4-48P-201ENST00000365559 COL26A1Q96A83 441 aa6.23□□□□□ -1.41
RNU4-48P-201ENST00000365559 MYO19Q96H55 970 aa6.23□□□□□ -1.41
RNU4-48P-201ENST00000365559 STRN4Q9NRL3 753 aa6.23□□□□□ -1.41
RNU4-48P-201ENST00000365559 SEPT3Q9UH03 358 aa6.23□□□□□ -1.41
RNU4-48P-201ENST00000365559 EFSO43281 561 aa6.22□□□□□ -1.41
RNU4-48P-201ENST00000365559 PTCD1O75127 700 aaKnown RBP6.22□□□□□ -1.41
RNU4-48P-201ENST00000365559 FAM157BP0CG42 384 aa6.22□□□□□ -1.41
RNU4-48P-201ENST00000365559 FGFR3P22607 806 aa6.22□□□□□ -1.41
RNU4-48P-201ENST00000365559 CTBSQ01459 385 aa6.22□□□□□ -1.41
RNU4-48P-201ENST00000365559 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.22□□□□□ -1.41
RNU4-48P-201ENST00000365559 MBIPQ9NS73 344 aa6.22□□□□□ -1.41
RNU4-48P-201ENST00000365559 ANKIB1Q9P2G1 1089 aa6.22□□□□□ -1.41
RNU4-48P-201ENST00000365559 PHF24Q9UPV7 400 aa6.22□□□□□ -1.41
RNU4-48P-201ENST00000365559 C2CD2LO14523 706 aa6.21□□□□□ -1.42
RNU4-48P-201ENST00000365559 CD33P20138 364 aa6.21□□□□□ -1.42
RNU4-48P-201ENST00000365559 MX2P20592 715 aa6.21□□□□□ -1.42
RNU4-48P-201ENST00000365559 LORP23490 312 aaPredicted RBP6.21□□□□□ -1.42
RNU4-48P-201ENST00000365559 TYRO3Q06418 890 aa6.21□□□□□ -1.42
RNU4-48P-201ENST00000365559 GRIN2CQ14957 1233 aa6.21□□□□□ -1.42
RNU4-48P-201ENST00000365559 C11orf91Q3C1V1 193 aa6.21□□□□□ -1.42
RNU4-48P-201ENST00000365559 FAM26DQ5JW98 314 aa6.21□□□□□ -1.42
RNU4-48P-201ENST00000365559 C16orf46Q6P387 395 aa6.21□□□□□ -1.42
RNU4-48P-201ENST00000365559 BTLAQ7Z6A9 289 aa6.21□□□□□ -1.42
RNU4-48P-201ENST00000365559 CEP63Q96MT8 703 aa6.21□□□□□ -1.42
RNU4-48P-201ENST00000365559 DMGDHQ9UI17 866 aaKnown RBP6.21□□□□□ -1.42
RNU4-48P-201ENST00000365559 IGF1RP08069 1367 aa6.2□□□□□ -1.42
RNU4-48P-201ENST00000365559 TGFBR3LH3BV60 316 aa6.2□□□□□ -1.42
RNU4-48P-201ENST00000365559 TNFRSF10BO14763 440 aa6.2□□□□□ -1.42
RNU4-48P-201ENST00000365559 ADAMTS2O95450 1211 aa6.2□□□□□ -1.42
RNU4-48P-201ENST00000365559 SLURP2P0DP57 97 aa6.2□□□□□ -1.42
RNU4-48P-201ENST00000365559 SRSF11Q05519 484 aaKnown RBP6.2□□□□□ -1.42
RNU4-48P-201ENST00000365559 SFSWAPQ12872 951 aaKnown RBP6.2□□□□□ -1.42
RNU4-48P-201ENST00000365559 HIF1AQ16665 826 aa6.2□□□□□ -1.42
RNU4-48P-201ENST00000365559 BRD7Q9NPI1 651 aa6.2□□□□□ -1.42
RNU4-48P-201ENST00000365559 BMP4P12644 408 aa6.19□□□□□ -1.42
RNU4-48P-201ENST00000365559 IER5Q5VY09 327 aa6.19□□□□□ -1.42
RNU4-48P-201ENST00000365559 WHAMMQ8TF30 809 aa6.19□□□□□ -1.42
RNU4-48P-201ENST00000365559 IFT43Q96FT9 208 aa6.19□□□□□ -1.42
RNU4-48P-201ENST00000365559 MARK1Q9P0L2 795 aa6.19□□□□□ -1.42
RNU4-48P-201ENST00000365559 MICAL2O94851 1124 aa6.18□□□□□ -1.42
RNU4-48P-201ENST00000365559 GRNP28799 593 aaKnown RBP6.18□□□□□ -1.42
RNU4-48P-201ENST00000365559 LAMC2Q13753 1193 aa6.18□□□□□ -1.42
RNU4-48P-201ENST00000365559 ETFBKMTQ8IXQ9 262 aa6.18□□□□□ -1.42
RNU4-48P-201ENST00000365559 OPLAHO14841 1288 aa6.17□□□□□ -1.42
RNU4-48P-201ENST00000365559 INPP5BP32019 993 aa6.17□□□□□ -1.42
RNU4-48P-201ENST00000365559 IDH3AP50213 366 aa6.17□□□□□ -1.42
RNU4-48P-201ENST00000365559 INSM1Q01101 510 aaPredicted RBP6.17□□□□□ -1.42
RNU4-48P-201ENST00000365559 FAM182BQ5T319 152 aa6.17□□□□□ -1.42
RNU4-48P-201ENST00000365559 TREML1Q86YW5 311 aa6.17□□□□□ -1.42
RNU4-48P-201ENST00000365559 GTF3C2Q8WUA4 911 aaPredicted RBP6.17□□□□□ -1.42
RNU4-48P-201ENST00000365559 ACDQ96AP0 544 aa6.17□□□□□ -1.42
RNU4-48P-201ENST00000365559 NSFL1CQ9UNZ2 370 aaKnown RBP6.17□□□□□ -1.42
RNU4-48P-201ENST00000365559 KCNH4Q9UQ05 1017 aa6.17□□□□□ -1.42
RNU4-48P-201ENST00000365559 DNMT3AQ9Y6K1 912 aaPredicted RBP6.17□□□□□ -1.42
RNU4-48P-201ENST00000365559 ZBTB39O15060 712 aa6.16□□□□□ -1.42
RNU4-48P-201ENST00000365559 BRD2P25440 801 aaKnown RBP6.16□□□□□ -1.42
RNU4-48P-201ENST00000365559 MAP2K3P46734 347 aa6.16□□□□□ -1.42
RNU4-48P-201ENST00000365559 KCNQ4P56696 695 aa6.16□□□□□ -1.42
RNU4-48P-201ENST00000365559 PDE4CQ08493 712 aa6.16□□□□□ -1.42
RNU4-48P-201ENST00000365559 MTMR3Q13615 1198 aa6.16□□□□□ -1.42
RNU4-48P-201ENST00000365559 ZNF385CQ66K41 422 aaPredicted RBP6.16□□□□□ -1.42
RNU4-48P-201ENST00000365559 LYPD4Q6UWN0 246 aa6.16□□□□□ -1.42
RNU4-48P-201ENST00000365559 ZSCAN1Q8NBB4 408 aa6.16□□□□□ -1.42
RNU4-48P-201ENST00000365559 SLC30A3Q99726 388 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms