RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 SOWAHDA6NJG2 315 aa7.77□□□□□ -1.17
RNU6-560P-201ENST00000364007 ICMTO60725 284 aa7.77□□□□□ -1.17
RNU6-560P-201ENST00000364007 FKBP4Q02790 459 aaKnown RBP eCLIP7.77□□□□□ -1.17
RNU6-560P-201ENST00000364007 ECM1Q16610 540 aa7.77□□□□□ -1.17
RNU6-560P-201ENST00000364007 C11orf91Q3C1V1 193 aa7.77□□□□□ -1.17
RNU6-560P-201ENST00000364007 RIPOR1Q6ZS17 1223 aa7.77□□□□□ -1.17
RNU6-560P-201ENST00000364007 HSH2DQ96JZ2 352 aa7.77□□□□□ -1.17
RNU6-560P-201ENST00000364007 CUEDC1Q9NWM3 386 aaPredicted RBP7.77□□□□□ -1.17
RNU6-560P-201ENST00000364007 H3BRB1 525 aa7.76□□□□□ -1.17
RNU6-560P-201ENST00000364007 ZBTB39O15060 712 aa7.76□□□□□ -1.17
RNU6-560P-201ENST00000364007 THBS1P07996 1170 aa7.76□□□□□ -1.17
RNU6-560P-201ENST00000364007 LRRC69Q6ZNQ3 347 aa7.76□□□□□ -1.17
RNU6-560P-201ENST00000364007 SUSD3Q96L08 255 aa7.76□□□□□ -1.17
RNU6-560P-201ENST00000364007 TUT1Q9H6E5 874 aaKnown RBP7.76□□□□□ -1.17
RNU6-560P-201ENST00000364007 MPSTP25325 297 aa7.75□□□□□ -1.17
RNU6-560P-201ENST00000364007 DBN1Q16643 649 aa7.75□□□□□ -1.17
RNU6-560P-201ENST00000364007 IFT43Q96FT9 208 aa7.75□□□□□ -1.17
RNU6-560P-201ENST00000364007 CRISPLD1Q9H336 500 aa7.75□□□□□ -1.17
RNU6-560P-201ENST00000364007 STIM2Q9P246 746 aa7.75□□□□□ -1.17
RNU6-560P-201ENST00000364007 EGFL7Q9UHF1 273 aa7.75□□□□□ -1.17
RNU6-560P-201ENST00000364007 PPFIA3O75145 1194 aa7.74□□□□□ -1.17
RNU6-560P-201ENST00000364007 BRD2P25440 801 aaKnown RBP7.74□□□□□ -1.17
RNU6-560P-201ENST00000364007 SF3B2Q13435 895 aaKnown RBP7.74□□□□□ -1.17
RNU6-560P-201ENST00000364007 ZNF787Q6DD87 383 aa7.74□□□□□ -1.17
RNU6-560P-201ENST00000364007 ETFBKMTQ8IXQ9 262 aa7.74□□□□□ -1.17
RNU6-560P-201ENST00000364007 PGBD3Q8N328 593 aa7.74□□□□□ -1.17
RNU6-560P-201ENST00000364007 NEUROD4Q9HD90 331 aa7.74□□□□□ -1.17
RNU6-560P-201ENST00000364007 NPR3P17342 541 aa7.73□□□□□ -1.17
RNU6-560P-201ENST00000364007 VEGFBP49765 207 aa7.73□□□□□ -1.17
RNU6-560P-201ENST00000364007 GLYCTKQ8IVS8 523 aa7.73□□□□□ -1.17
RNU6-560P-201ENST00000364007 BIN2Q9UBW5 565 aaPredicted RBP7.73□□□□□ -1.17
RNU6-560P-201ENST00000364007 DMGDHQ9UI17 866 aaKnown RBP7.73□□□□□ -1.17
RNU6-560P-201ENST00000364007 ITGA6P23229 1130 aa7.72□□□□□ -1.17
RNU6-560P-201ENST00000364007 ATCAYQ86WG3 371 aa7.72□□□□□ -1.17
RNU6-560P-201ENST00000364007 TREML1Q86YW5 311 aa7.72□□□□□ -1.17
RNU6-560P-201ENST00000364007 ZCCHC2Q9C0B9 1178 aaKnown RBP7.72□□□□□ -1.17
RNU6-560P-201ENST00000364007 GPC6Q9Y625 555 aaPredicted RBP7.72□□□□□ -1.17
RNU6-560P-201ENST00000364007 GJA3Q9Y6H8 435 aa7.72□□□□□ -1.17
RNU6-560P-201ENST00000364007 TGFBR3LH3BV60 316 aa7.71□□□□□ -1.18
RNU6-560P-201ENST00000364007 MICAL2O94851 1124 aa7.71□□□□□ -1.18
RNU6-560P-201ENST00000364007 FAM13AO94988 1023 aa7.71□□□□□ -1.18
RNU6-560P-201ENST00000364007 EIF1AXP47813 144 aaKnown RBP7.71□□□□□ -1.18
RNU6-560P-201ENST00000364007 ARHGAP4P98171 946 aa7.71□□□□□ -1.18
RNU6-560P-201ENST00000364007 UBAP2LQ14157 1087 aaKnown RBP7.71□□□□□ -1.18
RNU6-560P-201ENST00000364007 EFHC2Q5JST6 749 aa7.71□□□□□ -1.18
RNU6-560P-201ENST00000364007 SND1Q7KZF4 910 aaKnown RBP eCLIP7.71□□□□□ -1.18
RNU6-560P-201ENST00000364007 NUCKS1Q9H1E3 243 aaKnown RBP7.71□□□□□ -1.18
RNU6-560P-201ENST00000364007 ANKIB1Q9P2G1 1089 aa7.71□□□□□ -1.18
RNU6-560P-201ENST00000364007 OPLAHO14841 1288 aa7.7□□□□□ -1.18
RNU6-560P-201ENST00000364007 NOM1Q5C9Z4 860 aaKnown RBP7.7□□□□□ -1.18
RNU6-560P-201ENST00000364007 BTLAQ7Z6A9 289 aa7.7□□□□□ -1.18
RNU6-560P-201ENST00000364007 NLRP8Q86W28 1048 aa7.7□□□□□ -1.18
RNU6-560P-201ENST00000364007 TRIM22Q8IYM9 498 aa7.7□□□□□ -1.18
RNU6-560P-201ENST00000364007 VWA5B2Q8N398 1253 aa7.7□□□□□ -1.18
RNU6-560P-201ENST00000364007 ZNF837Q96EG3 531 aaPredicted RBP7.7□□□□□ -1.18
RNU6-560P-201ENST00000364007 USP20Q9Y2K6 914 aa7.7□□□□□ -1.18
RNU6-560P-201ENST00000364007 CDC14CA4D256 554 aa7.69□□□□□ -1.18
RNU6-560P-201ENST00000364007 H7C1W4 665 aa7.69□□□□□ -1.18
RNU6-560P-201ENST00000364007 ZAP70P43403 619 aa7.69□□□□□ -1.18
RNU6-560P-201ENST00000364007 IDH3AP50213 366 aa7.69□□□□□ -1.18
RNU6-560P-201ENST00000364007 AAMPQ13685 434 aa7.69□□□□□ -1.18
RNU6-560P-201ENST00000364007 HIF1AQ16665 826 aa7.69□□□□□ -1.18
RNU6-560P-201ENST00000364007 ABTB2Q8N961 1025 aa7.69□□□□□ -1.18
RNU6-560P-201ENST00000364007 GTPBP3Q969Y2 492 aaKnown RBP7.69□□□□□ -1.18
RNU6-560P-201ENST00000364007 CEP63Q96MT8 703 aa7.69□□□□□ -1.18
RNU6-560P-201ENST00000364007 CCDC87Q9NVE4 849 aa7.69□□□□□ -1.18
RNU6-560P-201ENST00000364007 PODXL2Q9NZ53 605 aa7.69□□□□□ -1.18
RNU6-560P-201ENST00000364007 NXF1Q9UBU9 619 aaKnown RBP7.69□□□□□ -1.18
RNU6-560P-201ENST00000364007 HCN2Q9UL51 889 aa7.69□□□□□ -1.18
RNU6-560P-201ENST00000364007 ATXN7O15265 892 aaPredicted RBP7.68□□□□□ -1.18
RNU6-560P-201ENST00000364007 BNIP3LO60238 219 aa7.68□□□□□ -1.18
RNU6-560P-201ENST00000364007 IER5Q5VY09 327 aa7.68□□□□□ -1.18
RNU6-560P-201ENST00000364007 GPR152Q8TDT2 470 aa7.68□□□□□ -1.18
RNU6-560P-201ENST00000364007 GPR25O00155 361 aa7.67□□□□□ -1.18
RNU6-560P-201ENST00000364007 FZD6O60353 706 aa7.67□□□□□ -1.18
RNU6-560P-201ENST00000364007 GRNP28799 593 aaKnown RBP7.67□□□□□ -1.18
RNU6-560P-201ENST00000364007 INPP5BP32019 993 aa7.67□□□□□ -1.18
RNU6-560P-201ENST00000364007 TYRO3Q06418 890 aa7.67□□□□□ -1.18
RNU6-560P-201ENST00000364007 LBRQ14739 615 aaKnown RBP7.67□□□□□ -1.18
RNU6-560P-201ENST00000364007 TMCO4Q5TGY1 634 aa7.67□□□□□ -1.18
RNU6-560P-201ENST00000364007 PCDHGC4Q9Y5F7 938 aa7.67□□□□□ -1.18
RNU6-560P-201ENST00000364007 DCDC2BA2VCK2 349 aa7.66□□□□□ -1.18
RNU6-560P-201ENST00000364007 KHNYNO15037 678 aaKnown RBP7.66□□□□□ -1.18
RNU6-560P-201ENST00000364007 DNM1Q05193 864 aaKnown RBP7.66□□□□□ -1.18
RNU6-560P-201ENST00000364007 TNP2Q05952 138 aa7.66□□□□□ -1.18
RNU6-560P-201ENST00000364007 SFSWAPQ12872 951 aaKnown RBP7.66□□□□□ -1.18
RNU6-560P-201ENST00000364007 GRIN2CQ14957 1233 aa7.66□□□□□ -1.18
RNU6-560P-201ENST00000364007 SAMD5Q5TGI4 173 aa7.66□□□□□ -1.18
RNU6-560P-201ENST00000364007 ALKBH2Q6NS38 261 aa7.66□□□□□ -1.18
RNU6-560P-201ENST00000364007 EDEM1Q92611 657 aa7.66□□□□□ -1.18
RNU6-560P-201ENST00000364007 ABHD17AQ96GS6 310 aa7.66□□□□□ -1.18
RNU6-560P-201ENST00000364007 STRN4Q9NRL3 753 aa7.66□□□□□ -1.18
RNU6-560P-201ENST00000364007 NDFIP2Q9NV92 336 aa7.66□□□□□ -1.18
RNU6-560P-201ENST00000364007 MAPTP10636 758 aaKnown RBP7.65□□□□□ -1.18
RNU6-560P-201ENST00000364007 ARSDP51689 593 aa7.65□□□□□ -1.18
RNU6-560P-201ENST00000364007 FIGNL1Q6PIW4 674 aa7.65□□□□□ -1.18
RNU6-560P-201ENST00000364007 SV2AQ7L0J3 742 aa7.65□□□□□ -1.18
RNU6-560P-201ENST00000364007 RGL4Q8IZJ4 473 aa7.65□□□□□ -1.18
RNU6-560P-201ENST00000364007 GPR161Q8N6U8 529 aaKnown RBP7.65□□□□□ -1.18
RNU6-560P-201ENST00000364007 NANOS1Q8WY41 292 aaKnown RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms