RNA–Protein interactions for RNA: ENST00000363016.1

RNU6-249P-201, Transcript of RNA, U6 small nuclear 249, pseudogene, humanhuman

BASIC

Gene RNU6-249P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-249P-201ENST00000363016 PPM1FP49593 454 aaPredicted RBP6.33□□□□□ -1.4
RNU6-249P-201ENST00000363016 ELOAQ14241 798 aaKnown RBP6.33□□□□□ -1.4
RNU6-249P-201ENST00000363016 PLEKHG4Q58EX7 1191 aa6.33□□□□□ -1.4
RNU6-249P-201ENST00000363016 PPP4R3BQ5MIZ7 849 aa6.33□□□□□ -1.4
RNU6-249P-201ENST00000363016 PDXDC1Q6P996 788 aa6.33□□□□□ -1.4
RNU6-249P-201ENST00000363016 CTR9Q6PD62 1173 aa6.33□□□□□ -1.4
RNU6-249P-201ENST00000363016 C16orf87Q6PH81 154 aa6.33□□□□□ -1.4
RNU6-249P-201ENST00000363016 BRSK2Q8IWQ3 736 aa6.33□□□□□ -1.4
RNU6-249P-201ENST00000363016 IQCF2Q8IXL9 164 aa6.33□□□□□ -1.4
RNU6-249P-201ENST00000363016 FAM212AQ96EL1 285 aa6.33□□□□□ -1.4
RNU6-249P-201ENST00000363016 PDGFDQ9GZP0 370 aaPredicted RBP6.33□□□□□ -1.4
RNU6-249P-201ENST00000363016 TSPYL1Q9H0U9 437 aa6.33□□□□□ -1.4
RNU6-249P-201ENST00000363016 NUCKS1Q9H1E3 243 aaKnown RBP6.33□□□□□ -1.4
RNU6-249P-201ENST00000363016 ACBD3Q9H3P7 528 aa6.33□□□□□ -1.4
RNU6-249P-201ENST00000363016 CHCHD3Q9NX63 227 aaKnown RBP6.33□□□□□ -1.4
RNU6-249P-201ENST00000363016 SSUH2Q9Y2M2 353 aa6.33□□□□□ -1.4
RNU6-249P-201ENST00000363016 GTPBP10A4D1E9 387 aaKnown RBP6.32□□□□□ -1.4
RNU6-249P-201ENST00000363016 KIF3CO14782 793 aa6.32□□□□□ -1.4
RNU6-249P-201ENST00000363016 CCP110O43303 1012 aa6.32□□□□□ -1.4
RNU6-249P-201ENST00000363016 U2AF1L5P0DN76 240 aaPredicted RBP6.32□□□□□ -1.4
RNU6-249P-201ENST00000363016 PSMA3P25788 255 aa6.32□□□□□ -1.4
RNU6-249P-201ENST00000363016 MAPK1P28482 360 aa6.32□□□□□ -1.4
RNU6-249P-201ENST00000363016 CLCN1P35523 988 aa6.32□□□□□ -1.4
RNU6-249P-201ENST00000363016 NUBP1P53384 320 aa6.32□□□□□ -1.4
RNU6-249P-201ENST00000363016 GEMIN4P57678 1058 aaKnown RBP6.32□□□□□ -1.4
RNU6-249P-201ENST00000363016 U2AF1Q01081 240 aaKnown RBP eCLIP6.32□□□□□ -1.4
RNU6-249P-201ENST00000363016 CAMK2BQ13554 666 aa6.32□□□□□ -1.4
RNU6-249P-201ENST00000363016 PDE1CQ14123 709 aaPredicted RBP6.32□□□□□ -1.4
RNU6-249P-201ENST00000363016 MFSD10Q14728 455 aa6.32□□□□□ -1.4
RNU6-249P-201ENST00000363016 TMEM164Q5U3C3 297 aa6.32□□□□□ -1.4
RNU6-249P-201ENST00000363016 TTC30AQ86WT1 665 aa6.32□□□□□ -1.4
RNU6-249P-201ENST00000363016 CPXCR1Q8N123 301 aa6.32□□□□□ -1.4
RNU6-249P-201ENST00000363016 BHMTQ93088 406 aa6.32□□□□□ -1.4
RNU6-249P-201ENST00000363016 CENPTQ96BT3 561 aa6.32□□□□□ -1.4
RNU6-249P-201ENST00000363016 SELENOOQ9BVL4 669 aa6.32□□□□□ -1.4
RNU6-249P-201ENST00000363016 CD248Q9HCU0 757 aa6.32□□□□□ -1.4
RNU6-249P-201ENST00000363016 METTL5Q9NRN9 209 aaKnown RBP6.32□□□□□ -1.4
RNU6-249P-201ENST00000363016 SUN2Q9UH99 717 aa6.32□□□□□ -1.4
RNU6-249P-201ENST00000363016 PRRT4C9JH25 899 aa6.31□□□□□ -1.4
RNU6-249P-201ENST00000363016 CHL1O00533 1208 aa6.31□□□□□ -1.4
RNU6-249P-201ENST00000363016 NR1I2O75469 434 aa6.31□□□□□ -1.4
RNU6-249P-201ENST00000363016 TPM3P06753 285 aa6.31□□□□□ -1.4
RNU6-249P-201ENST00000363016 ZNF853P0CG23 659 aa6.31□□□□□ -1.4
RNU6-249P-201ENST00000363016 NAT2P11245 290 aa6.31□□□□□ -1.4
RNU6-249P-201ENST00000363016 CLK2P49760 499 aaKnown RBP6.31□□□□□ -1.4
RNU6-249P-201ENST00000363016 MDM2Q00987 491 aaPredicted RBP6.31□□□□□ -1.4
RNU6-249P-201ENST00000363016 ZNF394Q53GI3 561 aa6.31□□□□□ -1.4
RNU6-249P-201ENST00000363016 ACBD5Q5T8D3 534 aaPredicted RBP6.31□□□□□ -1.4
RNU6-249P-201ENST00000363016 CPLX2Q6PUV4 134 aaKnown RBP6.31□□□□□ -1.4
RNU6-249P-201ENST00000363016 TAS1R3Q7RTX0 852 aa6.31□□□□□ -1.4
RNU6-249P-201ENST00000363016 MTERF4Q7Z6M4 381 aaKnown RBP6.31□□□□□ -1.4
RNU6-249P-201ENST00000363016 MYO1HQ8N1T3 1032 aa6.31□□□□□ -1.4
RNU6-249P-201ENST00000363016 PPHLN1Q8NEY8 458 aaKnown RBP6.31□□□□□ -1.4
RNU6-249P-201ENST00000363016 SMCR8Q8TEV9 937 aaPredicted RBP6.31□□□□□ -1.4
RNU6-249P-201ENST00000363016 ERCC4Q92889 916 aaPredicted RBP6.31□□□□□ -1.4
RNU6-249P-201ENST00000363016 TRIM52Q96A61 297 aa6.31□□□□□ -1.4
RNU6-249P-201ENST00000363016 VMP1Q96GC9 406 aa6.31□□□□□ -1.4
RNU6-249P-201ENST00000363016 ZNF496Q96IT1 587 aaPredicted RBP6.31□□□□□ -1.4
RNU6-249P-201ENST00000363016 ASB16Q96NS5 453 aa6.31□□□□□ -1.4
RNU6-249P-201ENST00000363016 GPR101Q96P66 508 aaPredicted RBP6.31□□□□□ -1.4
RNU6-249P-201ENST00000363016 MAP3K14Q99558 947 aa6.31□□□□□ -1.4
RNU6-249P-201ENST00000363016 BEGAINQ9BUH8 593 aa6.31□□□□□ -1.4
RNU6-249P-201ENST00000363016 TRIM6Q9C030 488 aaPredicted RBP6.31□□□□□ -1.4
RNU6-249P-201ENST00000363016 DHX36Q9H2U1 1008 aaKnown RBP6.31□□□□□ -1.4
RNU6-249P-201ENST00000363016 LGR6Q9HBX8 967 aa6.31□□□□□ -1.4
RNU6-249P-201ENST00000363016 IP6K2Q9UHH9 426 aa6.31□□□□□ -1.4
RNU6-249P-201ENST00000363016 GTF2A1LQ9UNN4 478 aa6.31□□□□□ -1.4
RNU6-249P-201ENST00000363016 INPP5FQ9Y2H2 1132 aa6.31□□□□□ -1.4
RNU6-249P-201ENST00000363016 NCKAP5LQ9HCH0 1330 aa6.3□□□□□ -1.4
RNU6-249P-201ENST00000363016 SPDYE16A6NNV3 312 aaPredicted RBP6.3□□□□□ -1.4
RNU6-249P-201ENST00000363016 SSTR3P32745 418 aaPredicted RBP6.3□□□□□ -1.4
RNU6-249P-201ENST00000363016 CHMP4BP1P59074 171 aa6.3□□□□□ -1.4
RNU6-249P-201ENST00000363016 EXOSC10Q01780 885 aaKnown RBP6.3□□□□□ -1.4
RNU6-249P-201ENST00000363016 HIC1Q14526 733 aa6.3□□□□□ -1.4
RNU6-249P-201ENST00000363016 TOMM20Q15388 145 aa6.3□□□□□ -1.4
RNU6-249P-201ENST00000363016 SPECC1Q5M775 1068 aa6.3□□□□□ -1.4
RNU6-249P-201ENST00000363016 HYIQ5T013 277 aa6.3□□□□□ -1.4
RNU6-249P-201ENST00000363016 C11orf74Q86VG3 221 aa6.3□□□□□ -1.4
RNU6-249P-201ENST00000363016 MIGA1Q8NAN2 632 aa6.3□□□□□ -1.4
RNU6-249P-201ENST00000363016 N4BP2L2Q92802 583 aaPredicted RBP6.3□□□□□ -1.4
RNU6-249P-201ENST00000363016 E2F7Q96AV8 911 aa6.3□□□□□ -1.4
RNU6-249P-201ENST00000363016 TBC1D31Q96DN5 1066 aa6.3□□□□□ -1.4
RNU6-249P-201ENST00000363016 ZNF594Q96JF6 807 aaPredicted RBP6.3□□□□□ -1.4
RNU6-249P-201ENST00000363016 RNPC3Q96LT9 517 aaKnown RBP6.3□□□□□ -1.4
RNU6-249P-201ENST00000363016 REPIN1Q9BWE0 567 aaKnown RBP6.3□□□□□ -1.4
RNU6-249P-201ENST00000363016 MRS2Q9HD23 443 aa6.3□□□□□ -1.4
RNU6-249P-201ENST00000363016 KMT5AQ9NQR1 393 aa6.3□□□□□ -1.4
RNU6-249P-201ENST00000363016 STK26Q9P289 416 aa6.3□□□□□ -1.4
RNU6-249P-201ENST00000363016 USP25Q9UHP3 1055 aa6.3□□□□□ -1.4
RNU6-249P-201ENST00000363016 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.3□□□□□ -1.4
RNU6-249P-201ENST00000363016 GJA3Q9Y6H8 435 aa6.3□□□□□ -1.4
RNU6-249P-201ENST00000363016 IQCA1LA6NCM1 817 aa6.29□□□□□ -1.4
RNU6-249P-201ENST00000363016 TNFRSF10BO14763 440 aa6.29□□□□□ -1.4
RNU6-249P-201ENST00000363016 TSPAN6O43657 245 aa6.29□□□□□ -1.4
RNU6-249P-201ENST00000363016 CCDC172P0C7W6 258 aa6.29□□□□□ -1.4
RNU6-249P-201ENST00000363016 MSL3P1P0C860 447 aa6.29□□□□□ -1.4
RNU6-249P-201ENST00000363016 KIF5BP33176 963 aa6.29□□□□□ -1.4
RNU6-249P-201ENST00000363016 TNNI2P48788 182 aa6.29□□□□□ -1.4
RNU6-249P-201ENST00000363016 NUCB1Q02818 461 aa6.29□□□□□ -1.4
RNU6-249P-201ENST00000363016 MORC3Q14149 939 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms