RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 TUBGCP6Q96RT7 1819 aa19.56■□□□□ 0.72
IFT140-201ENST00000361339 ZNF500O60304 480 aaPredicted RBP19.56■□□□□ 0.72
IFT140-201ENST00000361339 CPA1P15085 419 aa19.55■□□□□ 0.72
IFT140-201ENST00000361339 OS9Q13438 667 aaPredicted RBP19.55■□□□□ 0.72
IFT140-201ENST00000361339 SPG7Q9UQ90 795 aa19.55■□□□□ 0.72
IFT140-201ENST00000361339 PLCB2Q00722 1185 aa19.55■□□□□ 0.72
IFT140-201ENST00000361339 KLHDC4Q8TBB5 520 aa19.55■□□□□ 0.72
IFT140-201ENST00000361339 PXDNLA1KZ92 1463 aa19.55■□□□□ 0.72
IFT140-201ENST00000361339 CHRNA2Q15822 529 aa19.54■□□□□ 0.72
IFT140-201ENST00000361339 DDX54Q8TDD1 881 aaKnown RBP19.54■□□□□ 0.72
IFT140-201ENST00000361339 MYL6BP14649 208 aa19.54■□□□□ 0.72
IFT140-201ENST00000361339 CWC27Q6UX04 472 aaKnown RBP19.54■□□□□ 0.72
IFT140-201ENST00000361339 KDM3BQ7LBC6 1761 aa19.54■□□□□ 0.72
IFT140-201ENST00000361339 NLRP2Q9NX02 1062 aa19.53■□□□□ 0.72
IFT140-201ENST00000361339 C9orf78Q9NZ63 289 aaPredicted RBP19.53■□□□□ 0.72
IFT140-201ENST00000361339 DBF4Q9UBU7 674 aaPredicted RBP19.53■□□□□ 0.72
IFT140-201ENST00000361339 DYNC1I1O14576 645 aa19.53■□□□□ 0.72
IFT140-201ENST00000361339 SASS6Q6UVJ0 657 aa19.53■□□□□ 0.72
IFT140-201ENST00000361339 RASEFQ8IZ41 740 aa19.52■□□□□ 0.72
IFT140-201ENST00000361339 KAZALD1Q96I82 304 aa19.52■□□□□ 0.72
IFT140-201ENST00000361339 NUCB2P80303 420 aa19.52■□□□□ 0.71
IFT140-201ENST00000361339 KIF1BPQ96EK5 621 aa19.52■□□□□ 0.71
IFT140-201ENST00000361339 GDPD2Q9HCC8 539 aa19.52■□□□□ 0.71
IFT140-201ENST00000361339 CACNA1FO60840 1977 aa19.52■□□□□ 0.71
IFT140-201ENST00000361339 RGPD5Q99666 1765 aa19.51■□□□□ 0.71
IFT140-201ENST00000361339 SPDYE4A6NLX3 237 aa19.51■□□□□ 0.71
IFT140-201ENST00000361339 SUCLG2Q96I99 432 aa19.51■□□□□ 0.71
IFT140-201ENST00000361339 SIL1Q9H173 461 aa19.51■□□□□ 0.71
IFT140-201ENST00000361339 CSPP1Q1MSJ5 1256 aa19.51■□□□□ 0.71
IFT140-201ENST00000361339 AMOTQ4VCS5 1084 aa19.51■□□□□ 0.71
IFT140-201ENST00000361339 CLEC17AQ6ZS10 378 aa19.51■□□□□ 0.71
IFT140-201ENST00000361339 SMAP1Q8IYB5 467 aaPredicted RBP19.51■□□□□ 0.71
IFT140-201ENST00000361339 PDLIM2Q96JY6 352 aa19.51■□□□□ 0.71
IFT140-201ENST00000361339 ERBB3P21860 1342 aa19.51■□□□□ 0.71
IFT140-201ENST00000361339 TERF1P54274 439 aa19.5■□□□□ 0.71
IFT140-201ENST00000361339 COL9A3Q14050 684 aaPredicted RBP19.5■□□□□ 0.71
IFT140-201ENST00000361339 NFATC2IPQ8NCF5 419 aa19.5■□□□□ 0.71
IFT140-201ENST00000361339 PDIA6Q15084 440 aa19.5■□□□□ 0.71
IFT140-201ENST00000361339 BCL11BQ9C0K0 894 aaPredicted RBP19.5■□□□□ 0.71
IFT140-201ENST00000361339 CCDC39Q9UFE4 941 aa19.5■□□□□ 0.71
IFT140-201ENST00000361339 RAB11FIP3O75154 756 aa19.49■□□□□ 0.71
IFT140-201ENST00000361339 HOXB7P09629 217 aa19.49■□□□□ 0.71
IFT140-201ENST00000361339 KSR2Q6VAB6 950 aa19.49■□□□□ 0.71
IFT140-201ENST00000361339 TLR7Q9NYK1 1049 aaKnown RBP19.49■□□□□ 0.71
IFT140-201ENST00000361339 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.49■□□□□ 0.71
IFT140-201ENST00000361339 LMO7Q8WWI1 1683 aa19.49■□□□□ 0.71
IFT140-201ENST00000361339 BICC1Q9H694 974 aaKnown RBP19.49■□□□□ 0.71
IFT140-201ENST00000361339 LRSAM1Q6UWE0 723 aa19.48■□□□□ 0.71
IFT140-201ENST00000361339 CCDC8Q9H0W5 538 aaPredicted RBP19.48■□□□□ 0.71
IFT140-201ENST00000361339 N4BP2Q86UW6 1770 aaPredicted RBP19.47■□□□□ 0.71
IFT140-201ENST00000361339 SGSM2O43147 1006 aa19.47■□□□□ 0.71
IFT140-201ENST00000361339 IGKV5-2P06315 115 aa19.47■□□□□ 0.71
IFT140-201ENST00000361339 HS1BP3Q53T59 392 aa19.47■□□□□ 0.71
IFT140-201ENST00000361339 TTC12Q9H892 705 aaPredicted RBP19.47■□□□□ 0.71
IFT140-201ENST00000361339 C1orf167Q5SNV9 1468 aa19.47■□□□□ 0.71
IFT140-201ENST00000361339 MCCP23508 829 aa19.47■□□□□ 0.71
IFT140-201ENST00000361339 PTH1RQ03431 593 aa19.47■□□□□ 0.71
IFT140-201ENST00000361339 HSPA4P34932 840 aa19.47■□□□□ 0.71
IFT140-201ENST00000361339 EPHA10Q5JZY3 1008 aa19.47■□□□□ 0.71
IFT140-201ENST00000361339 LSG1Q9H089 658 aaKnown RBP19.47■□□□□ 0.71
IFT140-201ENST00000361339 CWC22Q9HCG8 908 aaKnown RBP19.47■□□□□ 0.71
IFT140-201ENST00000361339 SNX14Q9Y5W7 946 aa19.47■□□□□ 0.71
IFT140-201ENST00000361339 SLIT3O75094 1523 aa19.46■□□□□ 0.71
IFT140-201ENST00000361339 KIAA2012Q0VF49 1180 aa19.46■□□□□ 0.71
IFT140-201ENST00000361339 CCDC94Q9BW85 323 aaPredicted RBP19.46■□□□□ 0.71
IFT140-201ENST00000361339 HEG1Q9ULI3 1381 aa19.46■□□□□ 0.71
IFT140-201ENST00000361339 ZNF496Q96IT1 587 aaPredicted RBP19.46■□□□□ 0.71
IFT140-201ENST00000361339 KDM6AO15550 1401 aaPredicted RBP19.45■□□□□ 0.7
IFT140-201ENST00000361339 SASH1O94885 1247 aa19.45■□□□□ 0.7
IFT140-201ENST00000361339 ZNF142P52746 1687 aaPredicted RBP19.45■□□□□ 0.7
IFT140-201ENST00000361339 PPP4R3BQ5MIZ7 849 aa19.45■□□□□ 0.7
IFT140-201ENST00000361339 ZNF790Q6PG37 636 aa19.45■□□□□ 0.7
IFT140-201ENST00000361339 AACSQ86V21 672 aa19.45■□□□□ 0.7
IFT140-201ENST00000361339 USP16Q9Y5T5 823 aa19.45■□□□□ 0.7
IFT140-201ENST00000361339 CSB-PGBD3P0DP91 1061 aa19.45■□□□□ 0.7
IFT140-201ENST00000361339 XAGE3Q8WTP9 111 aa19.44■□□□□ 0.7
IFT140-201ENST00000361339 RAPGEF4Q8WZA2 1011 aa19.44■□□□□ 0.7
IFT140-201ENST00000361339 NDUFB9Q9Y6M9 179 aa19.44■□□□□ 0.7
IFT140-201ENST00000361339 GRM8O00222 908 aa19.44■□□□□ 0.7
IFT140-201ENST00000361339 LARGE1O95461 756 aa19.44■□□□□ 0.7
IFT140-201ENST00000361339 CUL4AQ13619 759 aa19.44■□□□□ 0.7
IFT140-201ENST00000361339 EAF2Q96CJ1 260 aaPredicted RBP19.44■□□□□ 0.7
IFT140-201ENST00000361339 AOX1Q06278 1338 aa19.44■□□□□ 0.7
IFT140-201ENST00000361339 RAD50Q92878 1312 aa19.44■□□□□ 0.7
IFT140-201ENST00000361339 ADCK5Q3MIX3 580 aa19.44■□□□□ 0.7
IFT140-201ENST00000361339 COPS6Q7L5N1 327 aa19.44■□□□□ 0.7
IFT140-201ENST00000361339 RIC3Q7Z5B4 369 aa19.44■□□□□ 0.7
IFT140-201ENST00000361339 CNTROBQ8N137 903 aa19.44■□□□□ 0.7
IFT140-201ENST00000361339 EDC3Q96F86 508 aaKnown RBP19.44■□□□□ 0.7
IFT140-201ENST00000361339 MEGF6O75095 1541 aa19.43■□□□□ 0.7
IFT140-201ENST00000361339 NCAPD2Q15021 1401 aa19.43■□□□□ 0.7
IFT140-201ENST00000361339 CHGBP05060 677 aa19.43■□□□□ 0.7
IFT140-201ENST00000361339 ZSCAN20P17040 1043 aaPredicted RBP19.43■□□□□ 0.7
IFT140-201ENST00000361339 CLASRPQ8N2M8 674 aaKnown RBP19.43■□□□□ 0.7
IFT140-201ENST00000361339 C19orf44Q9H6X5 657 aa19.43■□□□□ 0.7
IFT140-201ENST00000361339 FAM227BQ96M60 508 aa19.43■□□□□ 0.7
IFT140-201ENST00000361339 USP25Q9UHP3 1055 aa19.43■□□□□ 0.7
IFT140-201ENST00000361339 NPHP3Q7Z494 1330 aa19.42■□□□□ 0.7
IFT140-201ENST00000361339 MTERF4Q7Z6M4 381 aaKnown RBP19.42■□□□□ 0.7
IFT140-201ENST00000361339 MYD88Q99836 296 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms