RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 MAP3K2Q9Y2U5 619 aa6.35□□□□□ -1.39
ATXN3-202ENST00000359366 C5P01031 1676 aa6.35□□□□□ -1.39
ATXN3-202ENST00000359366 OVOS2A0A0G2JMS6 1433 aa6.34□□□□□ -1.39
ATXN3-202ENST00000359366 CCT4P50991 539 aaKnown RBP6.34□□□□□ -1.39
ATXN3-202ENST00000359366 TTC5Q8N0Z6 440 aa6.34□□□□□ -1.39
ATXN3-202ENST00000359366 ANKRD44Q8N8A2 993 aa6.34□□□□□ -1.39
ATXN3-202ENST00000359366 DCAF5Q96JK2 942 aa6.34□□□□□ -1.39
ATXN3-202ENST00000359366 CARD10Q9BWT7 1032 aa6.34□□□□□ -1.39
ATXN3-202ENST00000359366 USP44Q9H0E7 712 aa6.34□□□□□ -1.39
ATXN3-202ENST00000359366 BABAM1Q9NWV8 329 aa6.34□□□□□ -1.39
ATXN3-202ENST00000359366 ADCY9O60503 1353 aa6.34□□□□□ -1.39
ATXN3-202ENST00000359366 PDIA6Q15084 440 aa6.34□□□□□ -1.39
ATXN3-202ENST00000359366 UBAP1LF5GYI3 381 aa6.33□□□□□ -1.4
ATXN3-202ENST00000359366 DNAAF4Q8WXU2 420 aa6.33□□□□□ -1.4
ATXN3-202ENST00000359366 SYTL4Q96C24 671 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-202ENST00000359366 DBF4Q9UBU7 674 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-202ENST00000359366 ZNF330Q9Y3S2 320 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-202ENST00000359366 CACNA1FO60840 1977 aa6.33□□□□□ -1.4
ATXN3-202ENST00000359366 GNAI2P04899 355 aa6.33□□□□□ -1.4
ATXN3-202ENST00000359366 BEND3Q5T5X7 828 aa6.33□□□□□ -1.4
ATXN3-202ENST00000359366 VSIG10Q8N0Z9 540 aa6.33□□□□□ -1.4
ATXN3-202ENST00000359366 XAGE3Q8WTP9 111 aa6.33□□□□□ -1.4
ATXN3-202ENST00000359366 IPO9Q96P70 1041 aaKnown RBP6.33□□□□□ -1.4
ATXN3-202ENST00000359366 SRCIN1Q9C0H9 1055 aa6.33□□□□□ -1.4
ATXN3-202ENST00000359366 DCTPP1Q9H773 170 aa6.33□□□□□ -1.4
ATXN3-202ENST00000359366 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.33□□□□□ -1.43e-6■■□□□ 13.5
ATXN3-202ENST00000359366 CCDC9Q9Y3X0 531 aaKnown RBP6.33□□□□□ -1.4
ATXN3-202ENST00000359366 PKD1L3Q7Z443 1732 aa6.33□□□□□ -1.4
ATXN3-202ENST00000359366 PCDH11XQ9BZA7 1347 aa6.33□□□□□ -1.4
ATXN3-202ENST00000359366 PCDH11YQ9BZA8 1340 aa6.33□□□□□ -1.4
ATXN3-202ENST00000359366 HEG1Q9ULI3 1381 aa6.33□□□□□ -1.4
ATXN3-202ENST00000359366 UBTFL1P0CB47 393 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-202ENST00000359366 TIE1P35590 1138 aa6.32□□□□□ -1.4
ATXN3-202ENST00000359366 MFAP1P55081 439 aaKnown RBP6.32□□□□□ -1.4
ATXN3-202ENST00000359366 RTL5Q5HYW3 569 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-202ENST00000359366 COPS6Q7L5N1 327 aa6.32□□□□□ -1.4
ATXN3-202ENST00000359366 RNF166Q96A37 237 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-202ENST00000359366 CHMP4BQ9H444 224 aaKnown RBP6.32□□□□□ -1.4
ATXN3-202ENST00000359366 ASAP1Q9ULH1 1129 aa6.32□□□□□ -1.4
ATXN3-202ENST00000359366 PHLPP1O60346 1717 aa6.32□□□□□ -1.4
ATXN3-202ENST00000359366 A1BGP04217 495 aa6.32□□□□□ -1.4
ATXN3-202ENST00000359366 EMP3P54852 163 aa6.32□□□□□ -1.4
ATXN3-202ENST00000359366 GCC1Q96CN9 775 aa6.32□□□□□ -1.4
ATXN3-202ENST00000359366 FBXO3Q9UK99 471 aa6.32□□□□□ -1.4
ATXN3-202ENST00000359366 COL16A1Q07092 1604 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-202ENST00000359366 ADAMTS7Q9UKP4 1686 aa6.32□□□□□ -1.4
ATXN3-202ENST00000359366 SHANK3Q9BYB0 1731 aa6.32□□□□□ -1.4
ATXN3-202ENST00000359366 ATP5J2-PTCD1G3V325 749 aa6.31□□□□□ -1.4
ATXN3-202ENST00000359366 HOXB7P09629 217 aa6.31□□□□□ -1.4
ATXN3-202ENST00000359366 SNRPA1P09661 255 aaKnown RBP6.31□□□□□ -1.4
ATXN3-202ENST00000359366 RIC3Q7Z5B4 369 aa6.31□□□□□ -1.4
ATXN3-202ENST00000359366 FMNL2Q96PY5 1086 aa6.31□□□□□ -1.4
ATXN3-202ENST00000359366 IL1RAPL2Q9NP60 686 aa6.31□□□□□ -1.4
ATXN3-202ENST00000359366 NOP58Q9Y2X3 529 aaKnown RBP6.31□□□□□ -1.4
ATXN3-202ENST00000359366 PARP4Q9UKK3 1724 aaKnown RBP6.31□□□□□ -1.4
ATXN3-202ENST00000359366 NBPF26B4DH59 902 aa6.31□□□□□ -1.4
ATXN3-202ENST00000359366 GNAI3P08754 354 aa6.31□□□□□ -1.4
ATXN3-202ENST00000359366 GSPT1P15170 499 aaKnown RBP6.31□□□□□ -1.4
ATXN3-202ENST00000359366 IER5LQ5T953 404 aa6.31□□□□□ -1.4
ATXN3-202ENST00000359366 NBPF14Q5TI25 921 aa6.31□□□□□ -1.4
ATXN3-202ENST00000359366 NBPF10Q6P3W6 841 aaKnown RBP6.31□□□□□ -1.4
ATXN3-202ENST00000359366 KSR2Q6VAB6 950 aa6.31□□□□□ -1.4
ATXN3-202ENST00000359366 PPP1R42Q7Z4L9 355 aa6.31□□□□□ -1.4
ATXN3-202ENST00000359366 PLEKHM2Q8IWE5 1019 aa6.31□□□□□ -1.4
ATXN3-202ENST00000359366 RPAP2Q8IXW5 612 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-202ENST00000359366 NBPF15Q8N660 670 aa6.31□□□□□ -1.4
ATXN3-202ENST00000359366 PIGBQ92521 554 aa6.31□□□□□ -1.4
ATXN3-202ENST00000359366 ACSBG1Q96GR2 724 aa6.31□□□□□ -1.4
ATXN3-202ENST00000359366 MYD88Q99836 296 aa6.31□□□□□ -1.4
ATXN3-202ENST00000359366 DDX21Q9NR30 783 aaKnown RBP eCLIP6.31□□□□□ -1.4
ATXN3-202ENST00000359366 SRGAP3O43295 1099 aa6.3□□□□□ -1.4
ATXN3-202ENST00000359366 IGKV5-2P06315 115 aa6.3□□□□□ -1.4
ATXN3-202ENST00000359366 HSP90AB1P08238 724 aaKnown RBP6.3□□□□□ -1.4
ATXN3-202ENST00000359366 TTLL7Q6ZT98 887 aa6.3□□□□□ -1.4
ATXN3-202ENST00000359366 IFNLR1Q8IU57 520 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-202ENST00000359366 C8orf37Q96NL8 207 aa6.3□□□□□ -1.4
ATXN3-202ENST00000359366 HYPKQ9NX55 129 aa6.3□□□□□ -1.4
ATXN3-202ENST00000359366 C9orf78Q9NZ63 289 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-202ENST00000359366 ZBTB47Q9UFB7 747 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-202ENST00000359366 PA2G4Q9UQ80 394 aaKnown RBP6.3□□□□□ -1.4
ATXN3-202ENST00000359366 TOGARAM1Q9Y4F4 1720 aa6.3□□□□□ -1.4
ATXN3-202ENST00000359366 ABCC6O95255 1503 aa6.3□□□□□ -1.4
ATXN3-202ENST00000359366 GOLGB1Q14789 3259 aaKnown RBP6.3□□□□□ -1.4
ATXN3-202ENST00000359366 SOS1Q07889 1333 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-202ENST00000359366 A0A0U1RQG5 324 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-202ENST00000359366 TOM1O60784 492 aa6.3□□□□□ -1.4
ATXN3-202ENST00000359366 KLHDC4Q8TBB5 520 aa6.3□□□□□ -1.4
ATXN3-202ENST00000359366 TMOD3Q9NYL9 352 aa6.3□□□□□ -1.4
ATXN3-202ENST00000359366 AHDC1Q5TGY3 1603 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-202ENST00000359366 SURF6O75683 361 aaKnown RBP6.29□□□□□ -1.4
ATXN3-202ENST00000359366 ATP8B2P98198 1209 aa6.29□□□□□ -1.4
ATXN3-202ENST00000359366 FAM182BQ5T319 152 aa6.29□□□□□ -1.4
ATXN3-202ENST00000359366 LRP10Q7Z4F1 713 aa6.29□□□□□ -1.4
ATXN3-202ENST00000359366 NUTM1Q86Y26 1132 aa6.29□□□□□ -1.4
ATXN3-202ENST00000359366 ZBTB3Q9H5J0 574 aa6.29□□□□□ -1.4
ATXN3-202ENST00000359366 HMMRO75330 724 aa6.29□□□□□ -1.4
ATXN3-202ENST00000359366 MAP4K4O95819 1239 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-202ENST00000359366 PRIM1P49642 420 aaKnown RBP6.29□□□□□ -1.4
ATXN3-202ENST00000359366 DNAJC10Q8IXB1 793 aa6.29□□□□□ -1.4
ATXN3-202ENST00000359366 SUCLG2Q96I99 432 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms