RNA–Protein interactions for RNA: ENST00000359171.8

NUP98-203, Transcript of nucleoporin 98, humanhuman

TSL 5 BASIC

Gene NUP98, Length 7,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-203ENST00000359171 RRS1Q15050 365 aaKnown RBP16.74■□□□□ 0.27
NUP98-203ENST00000359171 IFI16Q16666 785 aaKnown RBP16.74■□□□□ 0.27
NUP98-203ENST00000359171 FAM200AQ8TCP9 573 aa16.74■□□□□ 0.27
NUP98-203ENST00000359171 JADE2Q9NQC1 790 aa16.74■□□□□ 0.27
NUP98-203ENST00000359171 STRN4Q9NRL3 753 aa16.74■□□□□ 0.27
NUP98-203ENST00000359171 ECHDC1Q9NTX5 307 aa16.74■□□□□ 0.27
NUP98-203ENST00000359171 HMG20BQ9P0W2 317 aa16.74■□□□□ 0.27
NUP98-203ENST00000359171 MACROD2A1Z1Q3 448 aa16.74■□□□□ 0.27
NUP98-203ENST00000359171 PROSER2Q86WR7 435 aaPredicted RBP16.74■□□□□ 0.27
NUP98-203ENST00000359171 UBA5Q9GZZ9 404 aa16.74■□□□□ 0.27
NUP98-203ENST00000359171 TMX1Q9H3N1 280 aa16.74■□□□□ 0.27
NUP98-203ENST00000359171 RBM5P52756 815 aaKnown RBP eCLIP16.73■□□□□ 0.27
NUP98-203ENST00000359171 CCDC40Q4G0X9 1142 aa16.73■□□□□ 0.27
NUP98-203ENST00000359171 DDX54Q8TDD1 881 aaKnown RBP16.73■□□□□ 0.27
NUP98-203ENST00000359171 ZKSCAN5Q9Y2L8 839 aa16.73■□□□□ 0.27
NUP98-203ENST00000359171 ANKRD18BA2A2Z9 1011 aa16.73■□□□□ 0.27
NUP98-203ENST00000359171 CYB5RLQ6IPT4 315 aa16.73■□□□□ 0.27
NUP98-203ENST00000359171 FBF1Q8TES7 1133 aa16.73■□□□□ 0.27
NUP98-203ENST00000359171 MINDY4BA8MYZ0 360 aa16.72■□□□□ 0.27
NUP98-203ENST00000359171 SKILP12757 684 aa16.72■□□□□ 0.27
NUP98-203ENST00000359171 MKNK2Q9HBH9 465 aa16.72■□□□□ 0.27
NUP98-203ENST00000359171 TCP11L1Q9NUJ3 509 aa16.72■□□□□ 0.27
NUP98-203ENST00000359171 RBM27Q9P2N5 1060 aaKnown RBP16.72■□□□□ 0.27
NUP98-203ENST00000359171 IARSP41252 1262 aaKnown RBP16.72■□□□□ 0.27
NUP98-203ENST00000359171 SPAG1Q07617 926 aa16.72■□□□□ 0.27
NUP98-203ENST00000359171 NSRP1Q9H0G5 558 aaKnown RBP16.72■□□□□ 0.27
NUP98-203ENST00000359171 HS1BP3Q53T59 392 aa16.72■□□□□ 0.27
NUP98-203ENST00000359171 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.72■□□□□ 0.273e-9■□□□□ 10.6
NUP98-203ENST00000359171 A0A087WZG4 1122 aa16.72■□□□□ 0.27
NUP98-203ENST00000359171 IFIT3O14879 490 aaKnown RBP16.72■□□□□ 0.27
NUP98-203ENST00000359171 CTNNA2P26232 953 aa16.72■□□□□ 0.27
NUP98-203ENST00000359171 NLRP5P59047 1200 aa16.72■□□□□ 0.27
NUP98-203ENST00000359171 FAM69CQ0P6D2 419 aa16.72■□□□□ 0.27
NUP98-203ENST00000359171 SKAP1Q86WV1 359 aa16.72■□□□□ 0.27
NUP98-203ENST00000359171 GTPBP4Q9BZE4 634 aaKnown RBP16.72■□□□□ 0.27
NUP98-203ENST00000359171 PTPRCP08575 1304 aa16.72■□□□□ 0.27
NUP98-203ENST00000359171 AKR1B10O60218 316 aa16.71■□□□□ 0.27
NUP98-203ENST00000359171 XRCC6P12956 609 aaKnown RBP eCLIP16.71■□□□□ 0.27
NUP98-203ENST00000359171 GTF2A1P52655 376 aaPredicted RBP16.71■□□□□ 0.27
NUP98-203ENST00000359171 TUBB4BP68371 445 aa16.71■□□□□ 0.27
NUP98-203ENST00000359171 PPP4R3AQ6IN85 833 aa16.71■□□□□ 0.27
NUP98-203ENST00000359171 N4BP3O15049 544 aa16.71■□□□□ 0.27
NUP98-203ENST00000359171 ZSCAN22P10073 491 aaPredicted RBP16.71■□□□□ 0.27
NUP98-203ENST00000359171 CCDC155Q8N6L0 562 aa16.71■□□□□ 0.27
NUP98-203ENST00000359171 CALML4Q96GE6 196 aa16.71■□□□□ 0.27
NUP98-203ENST00000359171 ARAP1Q96P48 1450 aa16.71■□□□□ 0.27
NUP98-203ENST00000359171 CTAGE1Q96RT6 745 aa16.71■□□□□ 0.27
NUP98-203ENST00000359171 USP16Q9Y5T5 823 aa16.71■□□□□ 0.27
NUP98-203ENST00000359171 TRIM27P14373 513 aa16.71■□□□□ 0.27
NUP98-203ENST00000359171 THUMPD2Q9BTF0 503 aaKnown RBP16.71■□□□□ 0.27
NUP98-203ENST00000359171 LRRC27Q9C0I9 530 aa16.71■□□□□ 0.27
NUP98-203ENST00000359171 ZSWIM4Q9H7M6 989 aa16.71■□□□□ 0.27
NUP98-203ENST00000359171 OPA1O60313 960 aa16.71■□□□□ 0.27
NUP98-203ENST00000359171 ORC3Q9UBD5 711 aaPredicted RBP16.71■□□□□ 0.27
NUP98-203ENST00000359171 SLU7O95391 586 aaKnown RBP16.7■□□□□ 0.26
NUP98-203ENST00000359171 TMOD2Q9NZR1 351 aa16.7■□□□□ 0.26
NUP98-203ENST00000359171 CAVIN4Q5BKX8 364 aa16.7■□□□□ 0.26
NUP98-203ENST00000359171 OSCARQ8IYS5 282 aa16.7■□□□□ 0.26
NUP98-203ENST00000359171 HOMER2Q9NSB8 354 aa16.7■□□□□ 0.26
NUP98-203ENST00000359171 ERICH3Q5RHP9 1530 aa16.7■□□□□ 0.26
NUP98-203ENST00000359171 POLR3DP05423 398 aaPredicted RBP16.7■□□□□ 0.26
NUP98-203ENST00000359171 CYLC1P35663 651 aaPredicted RBP16.7■□□□□ 0.26
NUP98-203ENST00000359171 LIG1P18858 919 aa16.7■□□□□ 0.26
NUP98-203ENST00000359171 RSPH14Q9UHP6 348 aa16.7■□□□□ 0.26
NUP98-203ENST00000359171 NOP2P46087 812 aaKnown RBP16.7■□□□□ 0.26
NUP98-203ENST00000359171 CCT2P78371 535 aaKnown RBP16.7■□□□□ 0.26
NUP98-203ENST00000359171 TTC22Q5TAA0 569 aa16.7■□□□□ 0.26
NUP98-203ENST00000359171 CCDC186Q7Z3E2 898 aa16.7■□□□□ 0.26
NUP98-203ENST00000359171 CCDC8Q9H0W5 538 aaPredicted RBP16.7■□□□□ 0.26
NUP98-203ENST00000359171 RMND1Q9NWS8 449 aa16.7■□□□□ 0.26
NUP98-203ENST00000359171 STARD3NLO95772 234 aa16.7■□□□□ 0.26
NUP98-203ENST00000359171 TAF7Q15545 349 aaPredicted RBP16.7■□□□□ 0.26
NUP98-203ENST00000359171 KIAA0753Q2KHM9 967 aa16.7■□□□□ 0.26
NUP98-203ENST00000359171 CATIPQ7Z7H3 387 aa16.7■□□□□ 0.26
NUP98-203ENST00000359171 SPINK5Q9NQ38 1064 aaPredicted RBP16.7■□□□□ 0.26
NUP98-203ENST00000359171 MCM10Q7L590 875 aa16.69■□□□□ 0.26
NUP98-203ENST00000359171 DNAI1Q9UI46 699 aa16.69■□□□□ 0.26
NUP98-203ENST00000359171 PRPF4BQ13523 1007 aaKnown RBP16.69■□□□□ 0.26
NUP98-203ENST00000359171 UBA7P41226 1012 aa16.69■□□□□ 0.26
NUP98-203ENST00000359171 STXBP4Q6ZWJ1 553 aa16.69■□□□□ 0.26
NUP98-203ENST00000359171 EHBP1L1Q8N3D4 1523 aa16.69■□□□□ 0.26
NUP98-203ENST00000359171 RANBP6O60518 1105 aaKnown RBP16.69■□□□□ 0.26
NUP98-203ENST00000359171 CCDC85AQ96PX6 553 aaPredicted RBP16.69■□□□□ 0.26
NUP98-203ENST00000359171 IDEP14735 1019 aa16.68■□□□□ 0.26
NUP98-203ENST00000359171 UBASH3AP57075 661 aa16.68■□□□□ 0.26
NUP98-203ENST00000359171 GIMAP6Q6P9H5 292 aa16.68■□□□□ 0.26
NUP98-203ENST00000359171 NEK1Q96PY6 1258 aa16.68■□□□□ 0.26
NUP98-203ENST00000359171 PLVAPQ9BX97 442 aa16.68■□□□□ 0.26
NUP98-203ENST00000359171 CCDC61Q9Y6R9 512 aa16.68■□□□□ 0.26
NUP98-203ENST00000359171 SYNJ2O15056 1496 aa16.68■□□□□ 0.26
NUP98-203ENST00000359171 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.68■□□□□ 0.26
NUP98-203ENST00000359171 BMP15O95972 392 aa16.68■□□□□ 0.26
NUP98-203ENST00000359171 SMARCA4P51532 1647 aa16.68■□□□□ 0.26
NUP98-203ENST00000359171 THEMISQ8N1K5 641 aaPredicted RBP16.68■□□□□ 0.26
NUP98-203ENST00000359171 TMX3Q96JJ7 454 aa16.68■□□□□ 0.26
NUP98-203ENST00000359171 FEZ1Q99689 392 aa16.68■□□□□ 0.26
NUP98-203ENST00000359171 CCDC172P0C7W6 258 aa16.68■□□□□ 0.26
NUP98-203ENST00000359171 CCDC82Q8N4S0 544 aa16.68■□□□□ 0.26
NUP98-203ENST00000359171 TCERG1LQ5VWI1 586 aa16.68■□□□□ 0.26
NUP98-203ENST00000359171 CCDC97Q96F63 343 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms