RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 ZKSCAN1P17029 563 aaPredicted RBP13.44□□□□□ -0.26
CNOT3-202ENST00000358389 GPATCH11Q8N954 259 aa13.44□□□□□ -0.26
CNOT3-202ENST00000358389 HSPA4P34932 840 aa13.44□□□□□ -0.26
CNOT3-202ENST00000358389 MED14O60244 1454 aa13.44□□□□□ -0.26
CNOT3-202ENST00000358389 TRIM66O15016 1216 aa13.44□□□□□ -0.26
CNOT3-202ENST00000358389 APPP05067 770 aa13.44□□□□□ -0.26
CNOT3-202ENST00000358389 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.44□□□□□ -0.26
CNOT3-202ENST00000358389 DNAI1Q9UI46 699 aa13.44□□□□□ -0.26
CNOT3-202ENST00000358389 NEMFO60524 1076 aa13.43□□□□□ -0.26
CNOT3-202ENST00000358389 CDC37L1Q7L3B6 337 aa13.43□□□□□ -0.26
CNOT3-202ENST00000358389 ADGRL1O94910 1474 aa13.43□□□□□ -0.26
CNOT3-202ENST00000358389 SEC31AO94979 1220 aaKnown RBP13.43□□□□□ -0.26
CNOT3-202ENST00000358389 AK7Q96M32 723 aa13.43□□□□□ -0.26
CNOT3-202ENST00000358389 SCAND2PQ9GZW5 306 aaPredicted RBP13.43□□□□□ -0.26
CNOT3-202ENST00000358389 PNMA6AP0CW24 399 aaPredicted RBP13.43□□□□□ -0.26
CNOT3-202ENST00000358389 RRS1Q15050 365 aaKnown RBP13.43□□□□□ -0.26
CNOT3-202ENST00000358389 ZSCAN26Q16670 478 aa13.43□□□□□ -0.26
CNOT3-202ENST00000358389 IL25Q9H293 177 aa13.43□□□□□ -0.26
CNOT3-202ENST00000358389 CEP152O94986 1710 aa13.43□□□□□ -0.26
CNOT3-202ENST00000358389 NR1I2O75469 434 aa13.42□□□□□ -0.26
CNOT3-202ENST00000358389 CNTROBQ8N137 903 aa13.42□□□□□ -0.26
CNOT3-202ENST00000358389 POLKQ9UBT6 870 aa13.42□□□□□ -0.26
CNOT3-202ENST00000358389 SHPRHQ149N8 1683 aa13.42□□□□□ -0.26
CNOT3-202ENST00000358389 KIF2AO00139 706 aaPredicted RBP13.42□□□□□ -0.26
CNOT3-202ENST00000358389 PDCP20941 246 aa13.42□□□□□ -0.26
CNOT3-202ENST00000358389 GYS2P54840 703 aa13.41□□□□□ -0.26
CNOT3-202ENST00000358389 TEFQ10587 303 aa13.41□□□□□ -0.26
CNOT3-202ENST00000358389 G2E3Q7L622 706 aa13.41□□□□□ -0.26
CNOT3-202ENST00000358389 ERCC4Q92889 916 aaPredicted RBP13.41□□□□□ -0.26
CNOT3-202ENST00000358389 PNMA6EA0A0J9YXQ4 647 aa13.41□□□□□ -0.26
CNOT3-202ENST00000358389 CCDC73Q6ZRK6 1079 aa13.41□□□□□ -0.26
CNOT3-202ENST00000358389 PLA2G4DQ86XP0 818 aa13.41□□□□□ -0.26
CNOT3-202ENST00000358389 PRAM1Q96QH2 718 aa13.41□□□□□ -0.26
CNOT3-202ENST00000358389 ZNF446Q9NWS9 450 aa13.41□□□□□ -0.26
CNOT3-202ENST00000358389 PIK3R4Q99570 1358 aa13.41□□□□□ -0.26
CNOT3-202ENST00000358389 OAS2P29728 719 aaKnown RBP13.41□□□□□ -0.26
CNOT3-202ENST00000358389 LEKR1Q6ZMV7 388 aa13.41□□□□□ -0.26
CNOT3-202ENST00000358389 TMC6Q7Z403 805 aa13.41□□□□□ -0.26
CNOT3-202ENST00000358389 ZSCAN31Q96LW9 406 aaPredicted RBP13.41□□□□□ -0.26
CNOT3-202ENST00000358389 OSBPL3Q9H4L5 887 aa13.41□□□□□ -0.26
CNOT3-202ENST00000358389 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.41□□□□□ -0.26
CNOT3-202ENST00000358389 SFPQP23246 707 aaKnown RBP eCLIP13.41□□□□□ -0.26
CNOT3-202ENST00000358389 CCT4P50991 539 aaKnown RBP13.41□□□□□ -0.26
CNOT3-202ENST00000358389 ST5P78524 1137 aa13.41□□□□□ -0.26
CNOT3-202ENST00000358389 DDX11Q96FC9 970 aa13.41□□□□□ -0.26
CNOT3-202ENST00000358389 SDF4Q9BRK5 362 aa13.41□□□□□ -0.26
CNOT3-202ENST00000358389 SBNO2Q9Y2G9 1366 aa13.4□□□□□ -0.26
CNOT3-202ENST00000358389 TCHHQ07283 1943 aa13.4□□□□□ -0.26
CNOT3-202ENST00000358389 RAB11FIP3O75154 756 aa13.4□□□□□ -0.26
CNOT3-202ENST00000358389 NOM1Q5C9Z4 860 aaKnown RBP13.4□□□□□ -0.26
CNOT3-202ENST00000358389 CREBRFQ8IUR6 639 aa13.4□□□□□ -0.26
CNOT3-202ENST00000358389 TDRD7Q8NHU6 1098 aaKnown RBP13.4□□□□□ -0.26
CNOT3-202ENST00000358389 TULP2O00295 520 aa13.4□□□□□ -0.26
CNOT3-202ENST00000358389 KINO60870 393 aaKnown RBP13.4□□□□□ -0.26
CNOT3-202ENST00000358389 CLSTN2Q9H4D0 955 aa13.4□□□□□ -0.26
CNOT3-202ENST00000358389 UGGT1Q9NYU2 1555 aa13.4□□□□□ -0.26
CNOT3-202ENST00000358389 TSPYL4Q9UJ04 414 aa13.4□□□□□ -0.26
CNOT3-202ENST00000358389 MYO1CO00159 1063 aa13.4□□□□□ -0.26
CNOT3-202ENST00000358389 GNAI3P08754 354 aa13.4□□□□□ -0.26
CNOT3-202ENST00000358389 SLC20A2Q08357 652 aa13.4□□□□□ -0.26
CNOT3-202ENST00000358389 SMARCE1Q969G3 411 aa13.4□□□□□ -0.26
CNOT3-202ENST00000358389 PPP6R1Q9UPN7 881 aa13.4□□□□□ -0.26
CNOT3-202ENST00000358389 IQGAP3Q86VI3 1631 aa13.39□□□□□ -0.27
CNOT3-202ENST00000358389 NPHP3Q7Z494 1330 aa13.39□□□□□ -0.27
CNOT3-202ENST00000358389 SULT6B1Q6IMI4 303 aa13.39□□□□□ -0.27
CNOT3-202ENST00000358389 AOPEPQ8N6M6 819 aa13.39□□□□□ -0.27
CNOT3-202ENST00000358389 LRRN4CLQ8ND94 238 aa13.39□□□□□ -0.27
CNOT3-202ENST00000358389 RUFY2Q8WXA3 655 aa13.39□□□□□ -0.27
CNOT3-202ENST00000358389 GPATCH3Q96I76 525 aa13.39□□□□□ -0.27
CNOT3-202ENST00000358389 SH2B1Q9NRF2 756 aaPredicted RBP13.39□□□□□ -0.27
CNOT3-202ENST00000358389 C9orf78Q9NZ63 289 aaPredicted RBP13.39□□□□□ -0.27
CNOT3-202ENST00000358389 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.39□□□□□ -0.271e-6■■□□□ 11.7
CNOT3-202ENST00000358389 UNC13BO14795 1591 aa13.39□□□□□ -0.27
CNOT3-202ENST00000358389 PPFIA3O75145 1194 aa13.38□□□□□ -0.27
CNOT3-202ENST00000358389 UBTFL1P0CB47 393 aaPredicted RBP13.38□□□□□ -0.27
CNOT3-202ENST00000358389 ME3Q16798 604 aa13.38□□□□□ -0.27
CNOT3-202ENST00000358389 KIF1BPQ96EK5 621 aa13.38□□□□□ -0.27
CNOT3-202ENST00000358389 EPC1Q9H2F5 836 aa13.38□□□□□ -0.27
CNOT3-202ENST00000358389 ZSWIM4Q9H7M6 989 aa13.38□□□□□ -0.27
CNOT3-202ENST00000358389 RAPGEF3O95398 923 aa13.38□□□□□ -0.27
CNOT3-202ENST00000358389 CEP57L1Q8IYX8 460 aa13.38□□□□□ -0.27
CNOT3-202ENST00000358389 LEO1Q8WVC0 666 aaPredicted RBP13.38□□□□□ -0.27
CNOT3-202ENST00000358389 DRC1Q96MC2 740 aa13.38□□□□□ -0.27
CNOT3-202ENST00000358389 CARD6Q9BX69 1037 aa13.38□□□□□ -0.27
CNOT3-202ENST00000358389 ADCK5Q3MIX3 580 aa13.38□□□□□ -0.27
CNOT3-202ENST00000358389 C11orf57Q6ZUT1 292 aaPredicted RBP13.38□□□□□ -0.27
CNOT3-202ENST00000358389 SGSM2O43147 1006 aa13.37□□□□□ -0.27
CNOT3-202ENST00000358389 PLA2G4AP47712 749 aa13.37□□□□□ -0.27
CNOT3-202ENST00000358389 FHOD1Q9Y613 1164 aa13.37□□□□□ -0.27
CNOT3-202ENST00000358389 PTPRCP08575 1304 aa13.37□□□□□ -0.27
CNOT3-202ENST00000358389 ZNF853P0CG23 659 aa13.37□□□□□ -0.27
CNOT3-202ENST00000358389 STX1AQ16623 288 aa13.37□□□□□ -0.27
CNOT3-202ENST00000358389 LARP1Q6PKG0 1096 aaKnown RBP13.37□□□□□ -0.27
CNOT3-202ENST00000358389 CDK19Q9BWU1 502 aa13.37□□□□□ -0.27
CNOT3-202ENST00000358389 SHROOM2Q13796 1616 aa13.37□□□□□ -0.27
CNOT3-202ENST00000358389 SMC1AQ14683 1233 aaKnown RBP13.37□□□□□ -0.27
CNOT3-202ENST00000358389 HYPKQ9NX55 129 aa13.37□□□□□ -0.27
CNOT3-202ENST00000358389 ATP10DQ9P241 1426 aa13.37□□□□□ -0.27
CNOT3-202ENST00000358389 CASQ1P31415 396 aa13.37□□□□□ -0.27
CNOT3-202ENST00000358389 SLFNL1Q499Z3 407 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms