RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 GLRX3O76003 335 aaKnown RBP15.93■□□□□ 0.14
NCDN-201ENST00000356090 BOLA2Q9H3K6 86 aa15.93■□□□□ 0.14
NCDN-201ENST00000356090 AMOTL2Q9Y2J4 779 aa15.93■□□□□ 0.14
NCDN-201ENST00000356090 FLT4P35916 1363 aa15.93■□□□□ 0.14
NCDN-201ENST00000356090 MPRIPQ6WCQ1 1025 aa15.93■□□□□ 0.14
NCDN-201ENST00000356090 LUZP1Q86V48 1076 aa15.93■□□□□ 0.14
NCDN-201ENST00000356090 SSH3Q8TE77 659 aa15.93■□□□□ 0.14
NCDN-201ENST00000356090 FSD1Q9BTV5 496 aa15.93■□□□□ 0.14
NCDN-201ENST00000356090 PREX1Q8TCU6 1659 aa15.93■□□□□ 0.14
NCDN-201ENST00000356090 SALL3Q9BXA9 1300 aa15.92■□□□□ 0.14
NCDN-201ENST00000356090 UVSSAQ2YD98 709 aa15.92■□□□□ 0.14
NCDN-201ENST00000356090 PPP4R3BQ5MIZ7 849 aa15.92■□□□□ 0.14
NCDN-201ENST00000356090 LSG1Q9H089 658 aaKnown RBP15.92■□□□□ 0.14
NCDN-201ENST00000356090 MYRIPQ8NFW9 859 aa15.92■□□□□ 0.14
NCDN-201ENST00000356090 PI4K2BQ8TCG2 481 aa15.92■□□□□ 0.14
NCDN-201ENST00000356090 NUP62CLQ9H1M0 184 aa15.92■□□□□ 0.14
NCDN-201ENST00000356090 LGR6Q9HBX8 967 aa15.92■□□□□ 0.14
NCDN-201ENST00000356090 KRT85P78386 507 aa15.91■□□□□ 0.14
NCDN-201ENST00000356090 EID1Q9Y6B2 187 aa15.91■□□□□ 0.14
NCDN-201ENST00000356090 IGSF3O75054 1194 aa15.91■□□□□ 0.14
NCDN-201ENST00000356090 CWF19L2Q2TBE0 894 aaKnown RBP15.91■□□□□ 0.14
NCDN-201ENST00000356090 HSP90AB4PQ58FF6 505 aa15.91■□□□□ 0.14
NCDN-201ENST00000356090 TNMDQ9H2S6 317 aa15.91■□□□□ 0.14
NCDN-201ENST00000356090 PYCARDQ9ULZ3 195 aa15.91■□□□□ 0.14
NCDN-201ENST00000356090 RPAP1Q9BWH6 1393 aaPredicted RBP15.91■□□□□ 0.14
NCDN-201ENST00000356090 PTGS1P23219 599 aa15.91■□□□□ 0.14
NCDN-201ENST00000356090 DDX11Q96FC9 970 aa15.91■□□□□ 0.14
NCDN-201ENST00000356090 FAM227BQ96M60 508 aa15.91■□□□□ 0.14
NCDN-201ENST00000356090 C16orf45Q96MC5 204 aaPredicted RBP15.91■□□□□ 0.14
NCDN-201ENST00000356090 RBM8AQ9Y5S9 174 aaKnown RBP15.9■□□□□ 0.14
NCDN-201ENST00000356090 G3BP1Q13283 466 aaKnown RBP eCLIP15.9■□□□□ 0.14
NCDN-201ENST00000356090 ME3Q16798 604 aa15.9■□□□□ 0.14
NCDN-201ENST00000356090 ECHDC1Q9NTX5 307 aa15.9■□□□□ 0.14
NCDN-201ENST00000356090 TCHHQ07283 1943 aa15.9■□□□□ 0.14
NCDN-201ENST00000356090 MAP3K11Q16584 847 aa15.9■□□□□ 0.14
NCDN-201ENST00000356090 MTMR6Q9Y217 621 aa15.9■□□□□ 0.14
NCDN-201ENST00000356090 SPATA32Q96LK8 384 aa15.89■□□□□ 0.13
NCDN-201ENST00000356090 DACT1Q9NYF0 836 aa15.89■□□□□ 0.13
NCDN-201ENST00000356090 BTBD11A6QL63 1104 aa15.89■□□□□ 0.13
NCDN-201ENST00000356090 H3BQV1 296 aa15.89■□□□□ 0.13
NCDN-201ENST00000356090 LTKP29376 864 aa15.89■□□□□ 0.13
NCDN-201ENST00000356090 IFFO2Q5TF58 517 aa15.89■□□□□ 0.13
NCDN-201ENST00000356090 CDC37L1Q7L3B6 337 aa15.89■□□□□ 0.13
NCDN-201ENST00000356090 HYPKQ9NX55 129 aa15.89■□□□□ 0.13
NCDN-201ENST00000356090 MAP3K2Q9Y2U5 619 aa15.89■□□□□ 0.13
NCDN-201ENST00000356090 LIG1P18858 919 aa15.88■□□□□ 0.13
NCDN-201ENST00000356090 ZNF530Q6P9A1 599 aaPredicted RBP15.88■□□□□ 0.13
NCDN-201ENST00000356090 BLOC1S2Q6QNY1 142 aa15.88■□□□□ 0.13
NCDN-201ENST00000356090 HOXC9P31274 260 aa15.88■□□□□ 0.13
NCDN-201ENST00000356090 KLHDC4Q8TBB5 520 aa15.88■□□□□ 0.13
NCDN-201ENST00000356090 PRIMPOLQ96LW4 560 aa15.88■□□□□ 0.13
NCDN-201ENST00000356090 SSH2Q76I76 1423 aa15.88■□□□□ 0.13
NCDN-201ENST00000356090 PLEKHG3A1L390 1219 aa15.88■□□□□ 0.13
NCDN-201ENST00000356090 CCDC186Q7Z3E2 898 aa15.88■□□□□ 0.13
NCDN-201ENST00000356090 USP6P35125 1406 aa15.87■□□□□ 0.13
NCDN-201ENST00000356090 CLTCQ00610 1675 aaKnown RBP15.87■□□□□ 0.13
NCDN-201ENST00000356090 PDCL2Q8N4E4 241 aa15.87■□□□□ 0.13
NCDN-201ENST00000356090 TTC14Q96N46 770 aa15.87■□□□□ 0.13
NCDN-201ENST00000356090 LRMPQ12912 555 aa15.87■□□□□ 0.13
NCDN-201ENST00000356090 NMIQ13287 307 aaPredicted RBP15.87■□□□□ 0.13
NCDN-201ENST00000356090 ANO6Q4KMQ2 910 aa15.87■□□□□ 0.13
NCDN-201ENST00000356090 TTC6Q86TZ1 520 aa15.87■□□□□ 0.13
NCDN-201ENST00000356090 CCDC94Q9BW85 323 aaPredicted RBP15.87■□□□□ 0.13
NCDN-201ENST00000356090 NDUFB9Q9Y6M9 179 aa15.87■□□□□ 0.13
NCDN-201ENST00000356090 SBNO1A3KN83 1393 aa15.87■□□□□ 0.13
NCDN-201ENST00000356090 ARHGEF10O15013 1369 aa15.87■□□□□ 0.13
NCDN-201ENST00000356090 MAP3K5Q99683 1374 aa15.87■□□□□ 0.13
NCDN-201ENST00000356090 RIOK3O14730 519 aaKnown RBP15.87■□□□□ 0.13
NCDN-201ENST00000356090 ZSCAN31Q96LW9 406 aaPredicted RBP15.87■□□□□ 0.13
NCDN-201ENST00000356090 LRRC2Q9BYS8 371 aa15.87■□□□□ 0.13
NCDN-201ENST00000356090 TPCN1Q9ULQ1 816 aa15.87■□□□□ 0.13
NCDN-201ENST00000356090 AP5Z1O43299 807 aa15.86■□□□□ 0.13
NCDN-201ENST00000356090 LRRC59Q96AG4 307 aaKnown RBP15.86■□□□□ 0.13
NCDN-201ENST00000356090 EDC3Q96F86 508 aaKnown RBP15.86■□□□□ 0.13
NCDN-201ENST00000356090 CREB3L3Q68CJ9 461 aa15.86■□□□□ 0.13
NCDN-201ENST00000356090 BCL2L12Q9HB09 334 aa15.86■□□□□ 0.13
NCDN-201ENST00000356090 IGSF1Q8N6C5 1336 aa15.86■□□□□ 0.13
NCDN-201ENST00000356090 TYRO3Q06418 890 aa15.85■□□□□ 0.13
NCDN-201ENST00000356090 SH2B1Q9NRF2 756 aaPredicted RBP15.85■□□□□ 0.13
NCDN-201ENST00000356090 MYL6BP14649 208 aa15.85■□□□□ 0.13
NCDN-201ENST00000356090 DNAJC2Q99543 621 aaKnown RBP15.85■□□□□ 0.13
NCDN-201ENST00000356090 VPS53Q5VIR6 699 aa15.85■□□□□ 0.13
NCDN-201ENST00000356090 RNF20Q5VTR2 975 aa15.85■□□□□ 0.13
NCDN-201ENST00000356090 GOLGA6L19H0YKK7 550 aa15.84■□□□□ 0.13
NCDN-201ENST00000356090 COL9A3Q14050 684 aaPredicted RBP15.84■□□□□ 0.13
NCDN-201ENST00000356090 C1orf141Q5JVX7 400 aa15.84■□□□□ 0.13
NCDN-201ENST00000356090 LARP1Q6PKG0 1096 aaKnown RBP15.84■□□□□ 0.13
NCDN-201ENST00000356090 NRBP1Q9UHY1 535 aa15.84■□□□□ 0.13
NCDN-201ENST00000356090 SETD1BQ9UPS6 1966 aaKnown RBP15.84■□□□□ 0.13
NCDN-201ENST00000356090 AOX1Q06278 1338 aa15.84■□□□□ 0.13
NCDN-201ENST00000356090 CCDC171Q6TFL3 1326 aa15.84■□□□□ 0.13
NCDN-201ENST00000356090 PSMA5P28066 241 aa15.84■□□□□ 0.13
NCDN-201ENST00000356090 TPD52L1Q16890 204 aaPredicted RBP15.84■□□□□ 0.13
NCDN-201ENST00000356090 FAM200AQ8TCP9 573 aa15.84■□□□□ 0.13
NCDN-201ENST00000356090 DNAJC25Q9H1X3 360 aa15.84■□□□□ 0.13
NCDN-201ENST00000356090 DLC1Q96QB1 1528 aa15.84■□□□□ 0.13
NCDN-201ENST00000356090 NPHP1O15259 732 aa15.84■□□□□ 0.13
NCDN-201ENST00000356090 BEND3Q5T5X7 828 aa15.84■□□□□ 0.13
NCDN-201ENST00000356090 RIC3Q7Z5B4 369 aa15.83■□□□□ 0.13
NCDN-201ENST00000356090 PRAMEF22A3QJZ6 481 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms