RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 RBM42Q9BTD8 480 aaKnown RBP28.37■■■□□ 2.13
SCAMP3-202ENST00000355379 THSD7AQ9UPZ6 1657 aa28.36■■■□□ 2.13
SCAMP3-202ENST00000355379 PPP1R42Q7Z4L9 355 aa28.36■■■□□ 2.13
SCAMP3-202ENST00000355379 GCKRQ14397 625 aa28.35■■■□□ 2.13
SCAMP3-202ENST00000355379 FAM98CQ17RN3 349 aaKnown RBP28.35■■■□□ 2.13
SCAMP3-202ENST00000355379 BMP2KLQ5H9B9 411 aa28.35■■■□□ 2.13
SCAMP3-202ENST00000355379 SYTL4Q96C24 671 aaPredicted RBP28.35■■■□□ 2.13
SCAMP3-202ENST00000355379 ANP32AP39687 249 aaKnown RBP28.34■■■□□ 2.13
SCAMP3-202ENST00000355379 PLEKHM2Q8IWE5 1019 aa28.33■■■□□ 2.13
SCAMP3-202ENST00000355379 COL15A1P39059 1388 aa28.33■■■□□ 2.13
SCAMP3-202ENST00000355379 RAB11FIP3O75154 756 aa28.33■■■□□ 2.13
SCAMP3-202ENST00000355379 TTLL7Q6ZT98 887 aa28.32■■■□□ 2.12
SCAMP3-202ENST00000355379 SLC4A9Q96Q91 983 aa28.32■■■□□ 2.12
SCAMP3-202ENST00000355379 LRRCC1Q9C099 1032 aa28.32■■■□□ 2.12
SCAMP3-202ENST00000355379 EXOC6BQ9Y2D4 811 aa28.32■■■□□ 2.12
SCAMP3-202ENST00000355379 SRGAP3O43295 1099 aa28.31■■■□□ 2.12
SCAMP3-202ENST00000355379 MEX3CQ5U5Q3 659 aaKnown RBP28.31■■■□□ 2.12
SCAMP3-202ENST00000355379 ZNF831Q5JPB2 1677 aa28.3■■■□□ 2.12
SCAMP3-202ENST00000355379 CYP19A1P11511 503 aaPredicted RBP28.3■■■□□ 2.12
SCAMP3-202ENST00000355379 SUCLG2Q96I99 432 aa28.3■■■□□ 2.12
SCAMP3-202ENST00000355379 SMARCA5O60264 1052 aaPredicted RBP28.29■■■□□ 2.12
SCAMP3-202ENST00000355379 HSP90AB4PQ58FF6 505 aa28.29■■■□□ 2.12
SCAMP3-202ENST00000355379 KAZALD1Q96I82 304 aa28.28■■■□□ 2.12
SCAMP3-202ENST00000355379 NOP58Q9Y2X3 529 aaKnown RBP28.28■■■□□ 2.12
SCAMP3-202ENST00000355379 C16orf71Q8IYS4 520 aaPredicted RBP28.28■■■□□ 2.12
SCAMP3-202ENST00000355379 ACSBG1Q96GR2 724 aa28.28■■■□□ 2.12
SCAMP3-202ENST00000355379 RREB1Q92766 1687 aa28.28■■■□□ 2.12
SCAMP3-202ENST00000355379 APBB1O00213 710 aa28.27■■■□□ 2.12
SCAMP3-202ENST00000355379 SMARCC1Q92922 1105 aaPredicted RBP28.27■■■□□ 2.12
SCAMP3-202ENST00000355379 OSBPL3Q9H4L5 887 aa28.27■■■□□ 2.12
SCAMP3-202ENST00000355379 SURF6O75683 361 aaKnown RBP28.25■■■□□ 2.11
SCAMP3-202ENST00000355379 ATRNO75882 1429 aa28.25■■■□□ 2.11
SCAMP3-202ENST00000355379 AFF2P51816 1311 aa28.25■■■□□ 2.11
SCAMP3-202ENST00000355379 TTC22Q5TAA0 569 aa28.24■■■□□ 2.11
SCAMP3-202ENST00000355379 BICC1Q9H694 974 aaKnown RBP28.24■■■□□ 2.11
SCAMP3-202ENST00000355379 ATP5J2-PTCD1G3V325 749 aa28.23■■■□□ 2.11
SCAMP3-202ENST00000355379 KIF6Q6ZMV9 814 aa28.23■■■□□ 2.11
SCAMP3-202ENST00000355379 NPM2Q86SE8 214 aaKnown RBP28.23■■■□□ 2.11
SCAMP3-202ENST00000355379 CCDC191Q8NCU4 936 aa28.23■■■□□ 2.11
SCAMP3-202ENST00000355379 GJD4Q96KN9 370 aaPredicted RBP28.23■■■□□ 2.11
SCAMP3-202ENST00000355379 CWC25Q9NXE8 425 aaPredicted RBP28.23■■■□□ 2.11
SCAMP3-202ENST00000355379 SALL3Q9BXA9 1300 aa28.23■■■□□ 2.11
SCAMP3-202ENST00000355379 SEC24BO95487 1268 aa28.23■■■□□ 2.11
SCAMP3-202ENST00000355379 CASP7P55210 303 aa28.23■■■□□ 2.11
SCAMP3-202ENST00000355379 KIF1BPQ96EK5 621 aa28.23■■■□□ 2.11
SCAMP3-202ENST00000355379 ZBTB3Q9H5J0 574 aa28.23■■■□□ 2.11
SCAMP3-202ENST00000355379 ANKRD36CQ5JPF3 1778 aa28.22■■■□□ 2.11
SCAMP3-202ENST00000355379 A0A087WZG4 1122 aa28.22■■■□□ 2.11
SCAMP3-202ENST00000355379 H7C1W4 665 aa28.22■■■□□ 2.11
SCAMP3-202ENST00000355379 OTUD7AQ8TE49 926 aaPredicted RBP28.22■■■□□ 2.11
SCAMP3-202ENST00000355379 ISCA1Q9BUE6 129 aa28.22■■■□□ 2.11
SCAMP3-202ENST00000355379 IL6STP40189 918 aaPredicted RBP28.21■■■□□ 2.11
SCAMP3-202ENST00000355379 TRIM28Q13263 835 aaKnown RBP28.21■■■□□ 2.11
SCAMP3-202ENST00000355379 TCIRG1Q13488 830 aa28.21■■■□□ 2.11
SCAMP3-202ENST00000355379 MAP3K15Q6ZN16 1313 aa28.21■■■□□ 2.11
SCAMP3-202ENST00000355379 NHSQ6T4R5 1651 aa28.21■■■□□ 2.11
SCAMP3-202ENST00000355379 PALLDQ8WX93 1383 aa28.2■■■□□ 2.11
SCAMP3-202ENST00000355379 RHPN1Q8TCX5 695 aa28.2■■■□□ 2.1
SCAMP3-202ENST00000355379 UPF2Q9HAU5 1272 aaKnown RBP28.2■■■□□ 2.1
SCAMP3-202ENST00000355379 TRPC5Q9UL62 973 aaPredicted RBP28.2■■■□□ 2.1
SCAMP3-202ENST00000355379 TUBGCP6Q96RT7 1819 aa28.2■■■□□ 2.1
SCAMP3-202ENST00000355379 COL5A3P25940 1745 aaPredicted RBP28.2■■■□□ 2.1
SCAMP3-202ENST00000355379 LOC102724428A0A0B4J2F2 783 aa28.19■■■□□ 2.1
SCAMP3-202ENST00000355379 ONECUT3O60422 494 aaPredicted RBP28.19■■■□□ 2.1
SCAMP3-202ENST00000355379 GSPT1P15170 499 aaKnown RBP28.19■■■□□ 2.1
SCAMP3-202ENST00000355379 PDE1AP54750 535 aa28.19■■■□□ 2.1
SCAMP3-202ENST00000355379 SIK1P57059 783 aa28.19■■■□□ 2.1
SCAMP3-202ENST00000355379 RABL6Q3YEC7 729 aaPredicted RBP28.19■■■□□ 2.1
SCAMP3-202ENST00000355379 ERC1Q8IUD2 1116 aa28.19■■■□□ 2.1
SCAMP3-202ENST00000355379 IPO9Q96P70 1041 aaKnown RBP28.19■■■□□ 2.1
SCAMP3-202ENST00000355379 UBE3BQ7Z3V4 1068 aa28.18■■■□□ 2.1
SCAMP3-202ENST00000355379 STAP2Q9UGK3 403 aa28.18■■■□□ 2.1
SCAMP3-202ENST00000355379 ZBTB1Q9Y2K1 713 aa28.18■■■□□ 2.1
SCAMP3-202ENST00000355379 A0A0G2JS52 829 aa28.18■■■□□ 2.1
SCAMP3-202ENST00000355379 AOX1Q06278 1338 aa28.17■■■□□ 2.1
SCAMP3-202ENST00000355379 KCNQ2O43526 872 aa28.17■■■□□ 2.1
SCAMP3-202ENST00000355379 ATP6V1AP38606 617 aa28.17■■■□□ 2.1
SCAMP3-202ENST00000355379 MYT1Q01538 1121 aa28.17■■■□□ 2.1
SCAMP3-202ENST00000355379 NUP98P52948 1817 aa28.17■■■□□ 2.1
SCAMP3-202ENST00000355379 HSP90AB3PQ58FF7 597 aa28.16■■■□□ 2.1
SCAMP3-202ENST00000355379 EPHA10Q5JZY3 1008 aa28.16■■■□□ 2.1
SCAMP3-202ENST00000355379 GIGYF2Q6Y7W6 1299 aaKnown RBP28.16■■■□□ 2.1
SCAMP3-202ENST00000355379 ERVV-1B6SEH8 477 aa28.15■■■□□ 2.1
SCAMP3-202ENST00000355379 EIF5BO60841 1220 aaKnown RBP28.15■■■□□ 2.1
SCAMP3-202ENST00000355379 DDRGK1Q96HY6 314 aa28.15■■■□□ 2.1
SCAMP3-202ENST00000355379 CCDC87Q9NVE4 849 aa28.15■■■□□ 2.1
SCAMP3-202ENST00000355379 ZNF330Q9Y3S2 320 aaPredicted RBP28.15■■■□□ 2.1
SCAMP3-202ENST00000355379 BTAF1O14981 1849 aa28.15■■■□□ 2.1
SCAMP3-202ENST00000355379 CDC45O75419 566 aa28.14■■■□□ 2.1
SCAMP3-202ENST00000355379 MX1P20591 662 aa28.14■■■□□ 2.1
SCAMP3-202ENST00000355379 INTS5Q6P9B9 1019 aaKnown RBP28.14■■■□□ 2.1
SCAMP3-202ENST00000355379 SBF2Q86WG5 1849 aa28.14■■■□□ 2.09
SCAMP3-202ENST00000355379 EIF5P55010 431 aaKnown RBP28.13■■■□□ 2.09
SCAMP3-202ENST00000355379 OS9Q13438 667 aaPredicted RBP28.13■■■□□ 2.09
SCAMP3-202ENST00000355379 G3BP1Q13283 466 aaKnown RBP eCLIP28.12■■■□□ 2.09
SCAMP3-202ENST00000355379 ITPK1Q13572 414 aa28.12■■■□□ 2.09
SCAMP3-202ENST00000355379 IL1RAPL2Q9NP60 686 aa28.12■■■□□ 2.09
SCAMP3-202ENST00000355379 COPRSQ9NQ92 184 aa28.12■■■□□ 2.09
SCAMP3-202ENST00000355379 MYH14Q7Z406 1995 aaKnown RBP28.12■■■□□ 2.09
SCAMP3-202ENST00000355379 CRKLP46109 303 aaKnown RBP28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms