RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 PSME1Q06323 249 aa7.35□□□□□ -1.23
CD47-201ENST00000355354 ANKRD36BQ8N2N9 1353 aa7.35□□□□□ -1.23
CD47-201ENST00000355354 GCP02774 474 aa7.34□□□□□ -1.23
CD47-201ENST00000355354 SMIM5Q71RC9 77 aa7.34□□□□□ -1.23
CD47-201ENST00000355354 CARD10Q9BWT7 1032 aa7.34□□□□□ -1.23
CD47-201ENST00000355354 LRRC4BQ9NT99 713 aa7.34□□□□□ -1.23
CD47-201ENST00000355354 MCM10Q7L590 875 aa7.34□□□□□ -1.23
CD47-201ENST00000355354 EDC3Q96F86 508 aaKnown RBP7.34□□□□□ -1.23
CD47-201ENST00000355354 CABP1Q9NZU7 370 aa7.34□□□□□ -1.23
CD47-201ENST00000355354 RBM27Q9P2N5 1060 aaKnown RBP7.34□□□□□ -1.23
CD47-201ENST00000355354 DDIT3P35638 169 aa7.34□□□□□ -1.24
CD47-201ENST00000355354 PTPN21Q16825 1174 aa7.34□□□□□ -1.24
CD47-201ENST00000355354 AMIGO3Q86WK7 504 aa7.34□□□□□ -1.24
CD47-201ENST00000355354 SCN4AP35499 1836 aa7.33□□□□□ -1.24
CD47-201ENST00000355354 DENND2AQ9ULE3 1009 aa7.33□□□□□ -1.24
CD47-201ENST00000355354 TCEANC2Q96MN5 208 aa7.33□□□□□ -1.24
CD47-201ENST00000355354 ZBTB47Q9UFB7 747 aaPredicted RBP7.33□□□□□ -1.24
CD47-201ENST00000355354 ECM29Q5VYK3 1845 aa7.32□□□□□ -1.24
CD47-201ENST00000355354 POLKQ9UBT6 870 aa7.32□□□□□ -1.24
CD47-201ENST00000355354 USHBP1Q8N6Y0 703 aa7.32□□□□□ -1.24
CD47-201ENST00000355354 CENPJQ9HC77 1338 aaPredicted RBP7.32□□□□□ -1.24
CD47-201ENST00000355354 NKX1-1Q15270 411 aaPredicted RBP7.31□□□□□ -1.24
CD47-201ENST00000355354 FAM98CQ17RN3 349 aaKnown RBP7.31□□□□□ -1.24
CD47-201ENST00000355354 ARAP2Q8WZ64 1704 aa7.31□□□□□ -1.24
CD47-201ENST00000355354 PMFBP1Q8TBY8 1022 aa7.31□□□□□ -1.24
CD47-201ENST00000355354 UBE2Q2LH0YL09 131 aa7.31□□□□□ -1.24
CD47-201ENST00000355354 KLHDC4Q8TBB5 520 aa7.31□□□□□ -1.24
CD47-201ENST00000355354 ERCC4Q92889 916 aaPredicted RBP7.31□□□□□ -1.24
CD47-201ENST00000355354 TRPM7Q96QT4 1865 aa7.31□□□□□ -1.24
CD47-201ENST00000355354 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.3□□□□□ -1.24
CD47-201ENST00000355354 ST3GAL1Q11201 340 aa7.3□□□□□ -1.24
CD47-201ENST00000355354 MEIS3Q99687 375 aa7.3□□□□□ -1.24
CD47-201ENST00000355354 NOB1Q9ULX3 412 aaKnown RBP7.3□□□□□ -1.24
CD47-201ENST00000355354 ZNF827Q17R98 1081 aa7.3□□□□□ -1.24
CD47-201ENST00000355354 ZNF830Q96NB3 372 aaPredicted RBP7.3□□□□□ -1.24
CD47-201ENST00000355354 SMCHD1A6NHR9 2005 aa7.3□□□□□ -1.24
CD47-201ENST00000355354 PNMA6EA0A0J9YXQ4 647 aa7.3□□□□□ -1.24
CD47-201ENST00000355354 EN1Q05925 392 aaPredicted RBP7.3□□□□□ -1.24
CD47-201ENST00000355354 FAM196AQ6ZSG2 479 aa7.3□□□□□ -1.24
CD47-201ENST00000355354 SYTL4Q96C24 671 aaPredicted RBP7.3□□□□□ -1.24
CD47-201ENST00000355354 PNPLA7Q6ZV29 1317 aa7.3□□□□□ -1.24
CD47-201ENST00000355354 SNAP23O00161 211 aa7.29□□□□□ -1.24
CD47-201ENST00000355354 DUOX1Q9NRD9 1551 aa7.29□□□□□ -1.24
CD47-201ENST00000355354 SSFA2P28290 1259 aa7.29□□□□□ -1.24
CD47-201ENST00000355354 LARGE1O95461 756 aa7.29□□□□□ -1.24
CD47-201ENST00000355354 MEX3CQ5U5Q3 659 aaKnown RBP7.29□□□□□ -1.24
CD47-201ENST00000355354 GJB4Q9NTQ9 266 aa7.28□□□□□ -1.24
CD47-201ENST00000355354 GOLGA4Q13439 2230 aaKnown RBP7.28□□□□□ -1.24
CD47-201ENST00000355354 GOLGA2Q08379 1002 aa7.28□□□□□ -1.24
CD47-201ENST00000355354 GON4LQ3T8J9 2241 aa7.28□□□□□ -1.24
CD47-201ENST00000355354 MFAP1P55081 439 aaKnown RBP7.28□□□□□ -1.24
CD47-201ENST00000355354 MAP3K19Q56UN5 1328 aa7.28□□□□□ -1.24
CD47-201ENST00000355354 U2SURPO15042 1029 aaKnown RBP7.28□□□□□ -1.24
CD47-201ENST00000355354 U2AF1L5P0DN76 240 aaPredicted RBP7.28□□□□□ -1.24
CD47-201ENST00000355354 U2AF1Q01081 240 aaKnown RBP eCLIP7.28□□□□□ -1.24
CD47-201ENST00000355354 ZBTB40Q9NUA8 1239 aa7.28□□□□□ -1.24
CD47-201ENST00000355354 ZBTB22O15209 634 aa7.27□□□□□ -1.24
CD47-201ENST00000355354 EIF5BO60841 1220 aaKnown RBP7.27□□□□□ -1.24
CD47-201ENST00000355354 MAP4K4O95819 1239 aaPredicted RBP7.27□□□□□ -1.24
CD47-201ENST00000355354 IFIT2P09913 472 aaKnown RBP7.27□□□□□ -1.24
CD47-201ENST00000355354 NOL8Q76FK4 1167 aaKnown RBP7.27□□□□□ -1.24
CD47-201ENST00000355354 RIPK4P57078 832 aa7.27□□□□□ -1.25
CD47-201ENST00000355354 EVX2Q03828 476 aa7.27□□□□□ -1.25
CD47-201ENST00000355354 UPF3BQ9BZI7 483 aaKnown RBP7.27□□□□□ -1.25
CD47-201ENST00000355354 COL4A5P29400 1685 aa7.27□□□□□ -1.25
CD47-201ENST00000355354 SLX4Q8IY92 1834 aa7.27□□□□□ -1.25
CD47-201ENST00000355354 MYO5AQ9Y4I1 1855 aaKnown RBP7.27□□□□□ -1.25
CD47-201ENST00000355354 FAM182BQ5T319 152 aa7.27□□□□□ -1.25
CD47-201ENST00000355354 VAMP4O75379 141 aa7.26□□□□□ -1.25
CD47-201ENST00000355354 PROSER3Q2NL68 480 aa7.26□□□□□ -1.25
CD47-201ENST00000355354 TBC1D32Q96NH3 1257 aa7.26□□□□□ -1.25
CD47-201ENST00000355354 TMPOP42166 694 aaKnown RBP7.26□□□□□ -1.25
CD47-201ENST00000355354 GSE1Q14687 1217 aa7.26□□□□□ -1.25
CD47-201ENST00000355354 TAOK2Q9UL54 1235 aa7.26□□□□□ -1.25
CD47-201ENST00000355354 ZBTB7BO15156 539 aaPredicted RBP7.26□□□□□ -1.25
CD47-201ENST00000355354 FANCGO15287 622 aa7.26□□□□□ -1.25
CD47-201ENST00000355354 DAXXQ9UER7 740 aaPredicted RBP7.26□□□□□ -1.25
CD47-201ENST00000355354 TFRCP02786 760 aaKnown RBP7.25□□□□□ -1.25
CD47-201ENST00000355354 RASEFQ8IZ41 740 aa7.25□□□□□ -1.25
CD47-201ENST00000355354 GADD45BO75293 160 aaPredicted RBP7.25□□□□□ -1.25
CD47-201ENST00000355354 PHAXQ9H814 394 aaKnown RBP7.25□□□□□ -1.25
CD47-201ENST00000355354 EXOC6BQ9Y2D4 811 aa7.25□□□□□ -1.25
CD47-201ENST00000355354 PRKAR2BP31323 418 aa7.24□□□□□ -1.25
CD47-201ENST00000355354 COL15A1P39059 1388 aa7.24□□□□□ -1.25
CD47-201ENST00000355354 CHRNA2Q15822 529 aa7.24□□□□□ -1.25
CD47-201ENST00000355354 GPT2Q8TD30 523 aa7.24□□□□□ -1.25
CD47-201ENST00000355354 KAZALD1Q96I82 304 aa7.24□□□□□ -1.25
CD47-201ENST00000355354 SYNE4Q8N205 404 aa7.24□□□□□ -1.25
CD47-201ENST00000355354 KCNQ2O43526 872 aa7.23□□□□□ -1.25
CD47-201ENST00000355354 FTOQ9C0B1 505 aaKnown RBP eCLIP7.23□□□□□ -1.25
CD47-201ENST00000355354 TMEM63CQ9P1W3 806 aa7.23□□□□□ -1.25
CD47-201ENST00000355354 ATP10DQ9P241 1426 aa7.23□□□□□ -1.25
CD47-201ENST00000355354 MYH3P11055 1940 aa7.23□□□□□ -1.25
CD47-201ENST00000355354 CDCA7Q9BWT1 371 aaPredicted RBP7.23□□□□□ -1.25
CD47-201ENST00000355354 TRIM37O94972 964 aa7.23□□□□□ -1.25
CD47-201ENST00000355354 MBIPQ9NS73 344 aa7.23□□□□□ -1.25
CD47-201ENST00000355354 FSD2A1L4K1 749 aa7.23□□□□□ -1.25
CD47-201ENST00000355354 IP6K1Q92551 441 aa7.23□□□□□ -1.25
CD47-201ENST00000355354 LGR6Q9HBX8 967 aa7.22□□□□□ -1.25
CD47-201ENST00000355354 GPHNQ9NQX3 736 aaPredicted RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 167.7 ms